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Stefan Coassin

@stncsn.bsky.social
178 followers 181 following 1 posts

Molecular biology, nanopore sequencing and a pinch of bioinformatics. Genomics enthusiast. Lipoprotein(a) genetics and other strange DNA stuff. Assoc Prof at Med Univ Innsbruck, Austria. genepi.i-med.ac.at/team/coassin-ste…

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Reposted by Stefan Coassin
Oxford Nanopore @nanoporetech.com · 11/05/2026
Join Stefan Hardy at #Nanoporeconf to see how their work could enable safer, more effective gene therapy. Using a single Oxford Nanopore platform, they precisely quantified rAAV for quality control in real-time. Register to join online: bit.ly/4tpWek0
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Ferlaino Group @ferlainogroup.bsky.social · 11/02/2025
😉
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Springer Nature @springernature.com · 29/01/2025
Find all Springer Nature journal and imprint accounts on Bluesky ⬇️.
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Florian Aigner @florianaigner.at · 01/02/2025
Wir müssen einfach für mehr Bildung sorgen, dachte ich lange. Wir müssen erklären, wie man wissenschaftlich denkt und logische Schlüsse zieht, dann wird alles gut. Das war falsch. Was wir brauchen ist ein Grundkonsens über anständiges Verhalten. Ohne diese Basis ist jedes Wissen umsonst.
futurezone.at
Ohne Anstand keine Fakten
Wissenschaftliche Fakten sind wichtig in einer Zeit der Fake News. Aber sie alleine bringen überhaupt nichts.
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Christos Argyropoulos MD, PhD, FASN 🇺🇸 0kale/acc @christosargyrop.bsky.social · 29/01/2025
The #deepseekr1 memes will continue until morale improves
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Albert Vilella, PhD. @albertvilella.bsky.social · 27/01/2025
Did I get it right? Open Source wiped half a trillion $ of perceived value in #AI stocks in one swift move? Wow.
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Stefan Coassin @stncsn.bsky.social · 20/01/2025
Happy to see that @stephanamstler.bsky.social is today's headliner on the university website with our paper about applying UMI- #nanopore sequencing to the complex #lipoprotein(a) KIV-2 #VNTR. Congrats! Paper at doi.org/n292
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Barbara Hoffmann-Ammann @babahof.bsky.social · 16/01/2025
‎Abonniere den Kanal Med Uni Innsbruck auf WhatsApp: whatsapp.com/channel/0029...
whatsapp.com
Med Uni Innsbruck | WhatsApp Channel
Med Uni Innsbruck WhatsApp Channel. Wissen|schaf(f)t Gesundheit: News, Tipps und Events der Med Uni Innsbruck für alle Interessierten. 144 followers
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Sebastian Schönherr @sebschoenherr.bsky.social · 16/01/2025
Are you working with one of the genotype imputation servers? Then this is your chance to see new features pretty soon on the server: @lukfor.bsky.social ky.social, @silvidm.bsky.social, and I are hosting our 2nd Nextflow in Genomics Hackathon to boost imputation servers here @i-med.ac.at 1/2
genepi.i-med.ac.at
Nextflow In Genomics 2025 - Genepi Innsbruck
Institute of Genetic Epidemiology, Medical University of Innsbruck
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Mike Inouye @mikeinouye.bsky.social · 15/01/2025
Regulation of protein abundance in normal human tissues www.medrxiv.org/content/10.1... GTEx's proteomics analysis finally out. 700 samples across 5 tissues, nearly 2000 cis-pQTLs, protein-protein correlations and comparison to RNA/eQTL.
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Nadav Ahituv @nadavahituv.bsky.social · 15/01/2025
Massively parallel reporter assays (MPRAs) testing >680,000 sequences combined with machine learning to improve regulatory element & variant effect prediction. Amazing work by @vagar.bsky.social, Fumitaka Inoue, @jshendure.bsky.social and many others as part of ENCODE. www.nature.com/articles/s41...
nature.com
Massively parallel characterization of transcriptional regulatory elements - Nature
Lentivirus-based reporter assays for 680,000 regulatory sequences from three cell lines coupled to machine-learning models lead to insights into the grammar of cis-regulatory elements.
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Eimear Kenny @eimearekenny.bsky.social · 14/01/2025
Truveta has built a database of 120M de-identified EHRs for digital phenotyping—and now they're teaming up with Regeneron and Illumina to sequence 10M patients across 30 US health systems. 🧬 Major move for precision medicine! www.geekwire.com/2025/seattle...
geekwire.com
Seattle’s newest unicorn: Truveta lands $320M to fuel creation of massive new genome project
The Truveta team at its Bellevue, Wash., headquarters last year. (Truveta Photo) Seattle-area health data company Truveta announced $320 million in
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Retro Computers @retrocomps.bsky.social · 12/01/2025
"How much do YOU think this advanced operating environment is worth? WAIT! Just one minute before you answer!" It's not hard to see how Steve Ballmer sold software in the 80s.
youtube.com
Windows 1.0 with Steve Ballmer (1986) (HQ, 60FPS)
Blue OS Museum (YouTube)
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MRC-LMB Cell Biology Division @cellbiol-mrclmb.bsky.social · 29/12/2024
40 years ago all of Genbank was published in print form by NAR. The same format today would require over 4 light seconds of shelf space. To a year of progress in 2025.
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Azin Kheirkhah @azinkh.bsky.social · 31/12/2024
Honored to receive the Wael Almahmeed & IAS Research Training Fellowship! Grateful for this opportunity and excited to start my project: “Decoding #PCSK9: New Perspectives on the Mature and Furin-Cleaved Forms” in 2025. Thank you for the support! #CardioSky #MedSky #Atherosclerosis
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plasmidsaurus @plasmidsaurus.bsky.social · 28/12/2024
Organelles meets dinos! 🦖🔬 Featuring Mitosaur, ERsaur, Golgisaur, Lysosaur, and others, it's such a creative take on the cellular world we know and love. 💚 Which dino-organelle is your favorite? Let us know below! 👇
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Adam Grant @adamgrant.bsky.social · 16/12/2024
When groups meet to brainstorm, good ideas are lost. People bite their tongues due to conformity pressure, noise, and ego threat. A better approach is brainwriting: generate ideas separately, then meet to assess and refine. Group wisdom begins with individual creativity.
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Lukas Forer @lukfor.bsky.social · 22/12/2024
Super cool! MultiQC now supports Haplocheck! 🚀 @sebschoenherr.bsky.social @whansi.bsky.social
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Azin Kheirkhah @azinkh.bsky.social · 19/12/2024
In #AtheroTalk 🎙️, we uncover unique insights from leading scientists you won’t hear in typical scientific talks. As we’re new to podcasting, we’d love your feedback to help us improve. Don’t miss these exciting conversations!🫀 #cardiosky #MedSky #science #podcast open.spotify.com/show/2zYZmr7...
AtheroTalk E01
#Denmark #Copenhagen #genetics #epidemiologyAtheroTalk E02
#Canada AtheroTalk E03 
#Italy #Pharmacology
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Sebastian Schönherr @sebschoenherr.bsky.social · 19/12/2024
This summer, @lukfor.bsky.social and I migrated the Michigan Imputation Server to Nextflow. 2M genomes later, we can say it was a big success. As a Christmas gift, we’re excited to show you how to set up your own local server in under 10 minutes. ##freeimputation genepi.github.io/michigan-imp...
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Adam Grant @adamgrant.bsky.social · 09/12/2024
In toxic cultures, people prove their intelligence by tearing others down. In healthy cultures, people use their intelligence to build others up. Knowledge and expertise are not weapons to wield. They're resources to share.
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Azin Kheirkhah @azinkh.bsky.social · 13/12/2024
What a fantastic talk Silvia delivered today! Zooming into the dark genome is absolutely fascinating, and it may hold many hidden answers waiting to be discovered! @silvidm.bsky.social @sebschoenherr.bsky.social @meduniibk.bsky.social #GeneticsSky#MedSky #CardioSky
#MedSky #CardioSky
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Sebastian Schönherr @sebschoenherr.bsky.social · 13/12/2024
Today @silvidm.bsky.social delivered an impressive talk on her latest research on repetitive regions in the human genome - could they hold the key to the missing heritability? Huge thanks to the Biocenter @meduniibk.bsky.social for hosting this. #ukb #nextflow #lpa #vntrs
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Hansi Weissensteiner @whansi.bsky.social · 10/12/2024
AI bending the rules just for me! 😎 #PrivilegedUser #LuckyDay #SpecialTreatment
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Claus Wilke @clauswilke.com · 07/12/2024
Story of my life.
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Cristian Pattaro @cpattaro.bsky.social · 26/11/2024
📢We have a new Post-doc position in #bioinformatics & #biostats • Link: eurac.onboard.org/jobs/RGbRKOG2 • Deadline: 15.12.2024 The fellow will work on bioinformatic methods for cancer & other complex traits. Looking for experts on RNA-seq, ChIP-seq, ATAC-seq and WES analyses
eurac.onboard.org
Post-doc position in bioinformatics and biostatistics
Eurac Research · Bozen/Bolzano
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Alexis Verger 🧬🧫🧪 @alexis-verger.cpesr.fr · 25/11/2024
Look who's here @pnas.org ✔️ @science.org ✔️ @naturecellbiology.bsky.social ✔️ @natrevgenet.bsky.social ✔️ @naturebiotech.bsky.social ✔️ @naturemicrobiol.bsky.social ✔️ @naturechemistry.bsky.social ✔️ @genesdev.bsky.social ✔️ @cellchembiol.bsky.social ✔️ @genomeresearch.bsky.social ✔️ @jcellbiol.bsky.social ✔️
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Kat Toropova @kattoropova.bsky.social · 24/11/2024
Sign of the times, no more bluebird on the biorxiv engagement tab..
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Evan Peck @peck.phd · 20/11/2024
Trying something new: A 🧵 on a topic I find many students struggle with: "why do their 📊 look more professional than my 📊?" It's *lots* of tiny decisions that aren't the defaults in many libraries, so let's break down 1 simple graph by @jburnmurdoch.bsky.social 🔗 www.ft.com/content/73a1...
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James Pirruccello 🎃🦇🧹 @jamespirruccello.com · 23/11/2024
It’s real. I did the pre-op from Neptune (fictionalized in the film Ad Astra).
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Stephen Turner @stephenturner.us · 30/10/2024
Cloudgene 3 (www.cloudgene.io): Transforming #Nextflow Pipelines into Powerful Web Services www.biorxiv.org/content/10.1101/202…
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Abby Polter @ampolter.bsky.social · 19/10/2024
One fun thing about academia is that if you complain long and hard enough about something you get to be chair of a committee devoted to fixing it.
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Stephan A. Glienke @glienkestephan.bsky.social · 03/08/2024
@academicchatter @skystorians @academics @humor @academichumor
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Stephen Turner @stephenturner.us · 31/07/2024
Scientists need more time to think www.nature.com/articles/d41...
nature.com
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badly drawn boo! 🎃👻🧛🏼‍♀️ @soapachu.bsky.social · 04/08/2024
Don't make me tap the sign
The side of a building where someone has added 'normalize not having an opinion on things you aren't properly informed on'
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Stephen Turner @stephenturner.us · 21/03/2024
Google's new scholar PDF reader extension is great. In-text citations are previewable links to references, clickable TOC headings, figure/table references. scholar.googleblog.com/2024/03/supe...
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bioRxiv Genomics @biorxiv-genomic.bsky.social · 05/03/2024
Nanopore sequencing with unique molecular identifiers enables accurate mutation analysis and haplotyping in the complex Lipoprotein(a) KIV-2 VNTR www.biorxiv.org/content/10.1101/202…
biorxiv.org
Nanopore sequencing with unique molecular identifiers enables accurate mutation analysis and haplotyping in the complex Lipoprotein(a) KIV-2 VNTR https://www.biorxiv.org/content/10.1101/2024.03.01.582741v1
Background: Repetitive genome regions, such as variable number of tandem repeats (VNTR) or short tan
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