iiinova — where your digital self keeps evolving

Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 28/09/2026

🚨 Immcantation users, don't forget to submit your 250-word abstract by October 1st! 👉 Find the template, submission instructions, and registration form here: immcantation.github.io/users-meetin... #immunosky

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Steven Kleinstein @skleinstein.bsky.social · 28/09/2026

🚨 immcantation.org user or interested in #Bcell repertoire analysis? 🗓️Join the FREE virtual 2027 Immcantation Users Group Meeting 📅 Jan 21, 2027 ⏰ 10AM–1:30PM ET 📢 Abstracts due Oct 1, 2026 🔗 immcantation.github.io/users-meetin...

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Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 20/08/2026

Save the Date:📅 1/21/27 10-1:30PM (ET). We’re excited to announce the upcoming FREE virtual 2027 Immcantation Users Group Meeting. Stay tuned for updated information, including registration, agenda, and abstract submission deadlines. immcantation.github.io/users-meetin... #immunosky

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Reposted by Steven Kleinstein

Eric Topol @erictopol.bsky.social · 05/08/2026

Severe Covid leads to persistent viral reactivation, with >10 different viruses noted in the first 40 days after hospital admission. Long Covid was specifically associated with reactivation of latent Anelloviridae virus @nature.com www.nature.com/articles/s41...

nature.com

Virus reactivation in acute and long COVID-19 - Nature

Chronic reactivation of distinct herpesviruses and anelloviruses occur during acute and long COVID-19, and track with disease severity, inflammation and outcomes, revealing immune signatures with prog...

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Reposted by Steven Kleinstein

Yale Pathology @yalepathology.bsky.social · 01/04/2026

Congratulations to Cole Jensen, MPH, a PhD Student in Computational Biology & Bioinformatics and a member of the @skleinstein.bsky.social Lab at @yalemedicine.bsky.social, on being chosen for a prestigious National Institutes of Health (NIH) F31 Award bit.ly/4bWbFtB

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Reposted by Steven Kleinstein

AIRR-Community @airr-community.bsky.social · 27/02/2026

🚀 Registration is now OPEN for AIRR Community Meeting VIII: Decoding and Recoding Immunity! Join us June 8–11, 2026 at Yale University (USA) or attend virtually. 💸 Early-bird rates available until April 15! 🔗 Register: tinyurl.com/airrcmeeting8 #AIRRC8 #immunosky

tinyurl.com

AIRR Community Meeting VIII.

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Reposted by Steven Kleinstein

Steven Kleinstein @skleinstein.bsky.social · 07/01/2026

Immcantation.org user or interested in #Bcell & #Tcell repertoire analysis? #AIRRseq 🚨Register now for the "2026 Immcantation Users Group Meeting" 🗓️FREE virtual meeting on January 22, 2026 from 10AM – 1:30PM ET. 🔗Program & registration: immcantation.github.io/users-meetin...

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Steven Kleinstein @skleinstein.bsky.social · 07/01/2026

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Steven Kleinstein @skleinstein.bsky.social · 31/10/2025

Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale? Join us for a CBB PhD Virtual Open House Tuesday, November 11 | 8:00–9:00 PM ET 👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_... @yalecbb.bsky.social

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Reposted by Steven Kleinstein

Armita Nourmohammad @thearmita.bsky.social · 27/10/2025

excited to announce that this January we are relocating to Yale to start a theory initiative at the Center for Systems and Engineering Immunology (CSEI): @yalecsei.bsky.social looking to hire 2 postdocs to join us in this endeavor. more details can be found here: sites.google.com/uw.edu/statp...

sites.google.com

SPE - join us

Postdoctoral position: In January 2026, we are relocating to Yale university to start a theory initiative at the Center for Systems and Engineering Immunology (CSEI). We are looking for talented postd...

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Steven Kleinstein @skleinstein.bsky.social · 16/10/2025

Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale? Join us for the CBB PhD Virtual Open House Tuesday, October 21 | 8:00–9:00 PM ET 👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_... @yalecbb.bsky.social

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Steven Kleinstein @skleinstein.bsky.social · 01/10/2025

TODAY is the deadline for abstract submission for the 2026 Immcantation Users Group Meeting! immcantation.github.io/users-meetin...

immcantation.github.io

2026 Immcantation Users Group Meeting

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Steven Kleinstein @skleinstein.bsky.social · 24/09/2025

🚨 Immcantation.org user or interested in #Bcell repertoire analysis? 🗓️ Join the FREE virtual 2026 Immcantation Users Group Meeting 📅 Jan 22, 2026 | ⏰ 10AM–1:30PM ET 📢 Abstracts due Oct 1, 2025 🔗 immcantation.github.io/users-meeting/2026 #AIRRseq #Immcantation

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Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 24/09/2025

🚨 One week left! 🚨 Don’t forget to submit your 250-word abstract by October 1st! Share how you use Immcantation and contribute to building a supportive, collaborative research community. 🔗 2026 Immcantation Users Group Meeting immcantation.github.io/users-meeting/2026 #airrseq #immunosky

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Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 28/08/2025

2026 Immcantation Users Group Meeting. Important information summary:
Who: open to the public
When: January 22nd, 2026
Time: 10:00 am - 1:30 pm ET
Where: Virtual
Fee: Free
Abstracts due: October 1st, 2025
Final program: December 1st, 2025

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Reposted by Steven Kleinstein

Prof. Akiko Iwasaki @virusesimmunity.bsky.social · 10/05/2025

Next week, we are hosting an international scientific workshop focused on the pathogenesis of #LongCovid at @yalemed.bsky.social. Please join us on May 15th to learn about what we know and what we need to investigate next to get to the root causes to accelerate therapies 👇🏼👇🏼

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Reposted by Steven Kleinstein

HIPC @hipcproject.bsky.social · 06/05/2025

Don’t forget! 🌺🧪 Our HIPC symposium is happening tomorrow — join us for a great lineup of talks from @bjoernpeters.bsky.social, @lungdrc.bsky.social, @settelab.bsky.social, Victoria Zyulina & Thomas Hagan Tues May 6th | 8:30-10:30 am | Room 313C #Immunology #AAI2025 #HIPC

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Reposted by Steven Kleinstein

David van Dijk @vandijklab.bsky.social · 18/04/2025

What if LLMs could “read” & “write” biology? 🤔 Introducing C2S‑Scale—a Yale and Google collab: we scaled LLMs (up to 27B!) to analyze & generate single‑cell data 🧬 ➡️ 📝 🔗 Blog: research.google/blog/teachin... 🔗 Preprint: biorxiv.org/content/10.1...

research.google

Teaching machines the language of biology: Scaling large language models for next-generation single-cell analysis

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Reposted by Steven Kleinstein

HIPC @hipcproject.bsky.social · 03/04/2025

Exciting news!! We are happy to announce that we will have a HIPC Symposium at @aai.org on Tues, May 6th. HIPC will also have a Super Booth at #AAI2025 along with @iedb.bsky.social and the iAKC Project. Check out the full Symposia list, and see you there! 🔗: immunology2025.aai.org/guest-sympos...

immunology2025.aai.org

Guest Symposia - IMMUNOLOGY2025™

Information and details about Guest Symposia to be presented at IMMUNOLOGY2025™!

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Reposted by Steven Kleinstein

Michelle Linterman @linterman.bsky.social · 17/03/2025

Great to have our latest review "The cellular factors that impair the germinal center in advanced age" out @jimmunol.bsky.social. Work led by @wsfoster.bsky.social and Edith Marcial-Juárez. With @sanmarti92.bsky.social creating the beautiful GC images in figure 2. doi.org/10.1093/jimm...

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Reposted by Steven Kleinstein

Stand Up for Science! @standupforscience.net · 02/03/2025

WHERE WILL YOU BE ON MARCH 7TH!? Head to www.standupforscience2025.org/local-event-information/ or the link in our bio to find your closest event—or add one if you're hosting one! #standupforscience2025

Map of Stand Up for Science events, with official SUFS events in Red and solidarity events in Blue

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Reposted by Steven Kleinstein

Stand Up for Science! @standupforscience.net · 21/02/2025

🚨☀️ Hey Bluesky! Know anyone near the following cities that would be willing to help us Stand Up for Science? ☀️🚨 Annapolis, MD Bismarck, ND Boise, ID Charleston, WV Dover, DE Jackson, MS Anchorage or Juneau, AK Montpelier, VT Richmond, VA Send them our way! #standupforscience2025

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Reposted by Steven Kleinstein

Stand Up for Science! @standupforscience.net · 12/02/2025

Welcome to the Bluesky account for Stand Up for Science 2025! Keep an eye on this space for updates, event information, and ways to get involved. We can't wait to see everyone #standupforscience2025 on March 7th, both in DC and locations nationwide! #scienceforall #sciencenotsilence

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Reposted by Steven Kleinstein

Science Magazine @science.org · 19/02/2025

Scientists are now organizing events, called Stand Up for Science, on 7 March in Washington, D.C., and state capitals. So far, they have attracted more than 100 volunteers from some 30 states who are hoping to rally support for research as a public good. scim.ag/4328LAD

scim.ag

‘I really wanted something to happen.’ The students behind the Stand Up for Science protests

New group hopes to turn out researchers for 7 March demonstrations against Trump administration policies

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Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 19/02/2025

Presentations from the 2025 Immcantation Users Group Meeting are now available on the Immcantation YouTube channel! Thank you to our speakers and participants! www.youtube.com/playlist?lis... #immcantation #airrseq #immunosky

youtube.com

2025 Immcantation Users Group Meeting - YouTube

The 2025 Immcantation Users Group Meeting (https://immcantation.github.io/users-meeting/2025/index.html) took place on January 30th, 2025. It served as a vir...

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Reposted by Steven Kleinstein

The Daily Pub @thedailypub.bsky.social · 13/01/2025

Unlocking new insights with nipalsMCIA. This tool speeds up data analysis for big datasets by clustering and visualizing info faster than before. Check it out for both bulk and single cell data on Bioconductor with how-to guides and extras online.

doi.org

nipalsMCIA: Flexible Multi-Block Dimensionality Reduction in R via Nonlinear Iterative Partial Least Squares.

Published in Bioinformatics (Oxford, England)

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Steven Kleinstein @skleinstein.bsky.social · 30/01/2025

Interested in B cell receptor repertoire analysis? We have a great set of speakers lined up for the “2025 Immcantation Users Group Meeting!” Check out the UPDATED program and register for this free virtual meeting taking place on 1/30/25 10AM-1:40PM (ET) at: immcantation.github.io/users-meetin...

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Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 29/01/2025

Don’t miss the “2025 Immcantation Users Group Meeting” on 1/30/25 10AM-1:40PM (ET) to learn how AIRR-seq can be used to study infection, vaccination, clonal lineages, and more. **UPDATED PROGRAM** and registration: immcantation.github.io/users-meetin... #immcantation #AIRRseq #immunosky #immunology

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Steven Kleinstein @skleinstein.bsky.social · 17/01/2025

Looking forward to hearing from the great speakers lined up for the “2025 Immcantation Users Group Meeting!” Check out the program and register for this free virtual meeting 1/30/25 10AM-1:40PM (ET) at: immcantation.github.io/users-meetin... @immcantation.bsky.social

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Reposted by Steven Kleinstein

HIPC @hipcproject.bsky.social · 27/12/2024

Find some of our over 50 investigators in Starter Pack. If you are one in our collaboration - please reply OR write a DM to @rgottardo.bsky.social to ask to be added. (Know you need adding - @camilacoelho.bsky.social and @joanndarce.bsky.social ) bsky.app/starter-pack...

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Reposted by Steven Kleinstein

HIPC @hipcproject.bsky.social · 05/12/2024

Investigators, if your name does not appear on the Starter Pack of HIPC investigators, please send a message to @rgottardo.bsky.social and ask to be added, or write a reply to him. We will be reminding you about this in meetings in the next few weeks. bsky.app/starter-pack...

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Reposted by Steven Kleinstein

fanofactor 🧬💻 @fanofactor.bsky.social · 16/12/2024

Immcantation.org user or interested in B cell repertoire analysis? Register now for “2025 Immcantation Users Group Meeting”. FREE virtual meeting 1/30/25 10AM-1:40PM (ET). Info at: immcantation.github.io/users-meetin... #immcantation #AIRRseq #immunosky

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Reposted by Steven Kleinstein

Dr Debbie Burnett @debburnett.bsky.social · 03/12/2024

I’ve tried to put together a starter pack of immunologists/scientists exploring B Cell Repertoires and Antibody Affinities. Please feel free to share/join! go.bsky.app/4P64DmM

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Reposted by Steven Kleinstein

Paul Thomas @pgtimmune.bsky.social · 26/11/2024

ALSO! We are hiring for the last open position (Bioinformatics Research Scientist) in the TIRTL group! Love coding, math, robotics, and uncovering the immune system's secrets? You know you do, so join us! (stjude.wd1.myworkdayjobs.com/stjude/job/M...).

stjude.wd1.myworkdayjobs.com

Bioinformatics Research Scientist (TIRTL Bluesky)

The Bioinformatics Research Scientist is responsible for designing, developing, improving, modifying, and operating data analysis pipelines. Manages projects and coordinates other efforts related to a...

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Reposted by Steven Kleinstein

Raphael Gottardo @rgottardo.bsky.social · 25/11/2024

Thanks @tsanglab.bsky.social for putting this together! #immunology #datascience go.bsky.app/PjH2Fuj

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Reposted by Steven Kleinstein

Raphael Gottardo @rgottardo.bsky.social · 24/11/2024

Ok, I tried to create my own list of people working on developing statistical or machine learning models applied to omics data. I am sure I missed a lot of cool people. If you'd like to be added, let me know. #Stats #ML #Omics go.bsky.app/73rcuJn

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Reposted by Steven Kleinstein

Kim Good-Jacobson @kimljacobson.bsky.social · 16/11/2024

Save the date! It may be a while to go yet, but I’m very excited for our B-cellapalooza in 2026!

Keystone Symposia conference in 2026 for B cells and plasma cells, in Keystone Colorado

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Reposted by Steven Kleinstein

Jamie Heather @jamieheather.bsky.social · 18/11/2024

Inspired by @rodrahimi.bsky.social 's noble efforts linking immunologists together over here, let's try and get more specifically TCR/BCR/AIRR/repertoire chat going with this starter park go.bsky.app/Gi2dcGd Drop me a beep to get added or suggest others!

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Steven Kleinstein @skleinstein.bsky.social · 20/11/2024

Are you an Immcantation.org user or interested in B cell repertoire analysis? Register now for the 2025 Immcantation Users Group Meeting! The meeting will feature talks from users showcasing how they use Immcantation in their research. Info and registration at: immcantation.github.io/users-meetin...

immcantation.org

Immcantation: An Integrated Framework for Adaptive Immune Receptor Repertoire Analysis

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