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Rock Lab

@rocklabtb.bsky.social
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Rock Lab @ Rockefeller University. Tuberculosis functional genomics.

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Typas Lab @typaslab.bsky.social · 20/08/2026
Excited to share our paper with @savitski-lab.bsky.social, led by @tarabartolec.bsky.social, Karin Mitosch & Clément Potel, out now in @nature.com. We show that T7 phage broadly disables bacterial defenses using a unique ‘loose cannon’ protein kinase. www.nature.com/articles/s41...
nature.com
Pervasive phosphorylation by phage T7 kinase disarms bacterial defences - Nature
The T7 bacteriophage deactivates bacterial defence systems through T7K phosphorylation of nearly all host and phage proteins during infection.
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The Rockefeller University @rockefeller.edu · 10/08/2026
A new @pnas.org paper from Elizabeth Campbell and Seth Darst solves a longstanding mystery about how a class of antibiotics works and simultaneously reveals a key structural mechanism behind one of biology's most important enzymes: RNA polymerase. 🔗: bit.ly/45jaPV8
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Salvador Almagro-Moreno @bioetry.bsky.social · 06/08/2026
We are looking for motivated Postdocs to join our lab to investigate the emergence and evolution of bacterial pathogens. If your profile and interests fit the description below get in touch! Please share.Thank you!
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sohailtavazoie.bsky.social @sohailtavazoie.bsky.social · 31/07/2026
🔥Out now in @cellcellpress.bsky.social Dietary arginine deficiency represses MHC-I translation via tRNAs & codon-usage, repressing anti-viral & anti-tumor immunity in CRC. Arginine supplementation drives MHC1, improves antiviral and anti-tumor immunity. by amazing Q Wu🧵👇 www.cell.com/cell/abstrac...
cell.com
Dietary arginine drives codon-dependent MHC class I translation and improves immunity in colon tumorigenesis and respiratory viral infection
Arginine availability regulates arginyl tRNA levels and codon-dependent translation of MHC class I, tuning antigen presentation and shaping anti-viral and anti-tumor immunity.
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Michael Glickman @michaelglickman.bsky.social · 23/07/2026
Please repost! #microsky🦠 The Glickman Lab at MSK is recruiting! Projects in Mtb pathogenesis, basic biology of mycobacteria, and mycobacterial cancer therapies. See our publications here: tinyurl.com/3f386f4x Send CV and cover letter to: glickmanmycolab@gmail.com
scholar.google.com
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Alissa Rothchild @alissarothchild.bsky.social · 15/07/2026
🌟 We're hiring! We're looking for enthusiastic and innovative postdoctoral fellows who are passionate about #immunology and #InfectiousDisease to join our collaborative team at UMass Amherst! #AlveolarMacrophages #TB #lung #InnateImmunity Apply now! careers.umass.edu/jobs/post-do...
careers.umass.edu
Post Doctoral Research Associate - Rothchild Lab - Amherst, Massachusetts, United States
Title: Post Doctoral Research Associate - Rothchild Lab Executive Area: Academic Affairs College/School/MBU: College of Natural Sciences Department: Veterinary & Animal Sciences Work Location: Amh...
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Jutras Lab @jutraslab.bsky.social · 15/07/2026
We're hiring an enthusiastic and ambitious technician to unravel the mysteries of spirochetes (#Lyme #syphilis). Come be a part of a wonderful team and working enviro in beautiful Chicago! Looking for training micro, molec, cell, or glycobiology of pathogens?👇 myhr.northwestern.edu/psp/hrnu/EMP...
#Microsky
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Rock Lab @rocklabtb.bsky.social · 02/07/2026
Congrats @jasonyanglab.org!
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Nature Microbiology @natmicrobiol.nature.com · 01/07/2026
Out Now! Identification of chemical features for improved outer membrane permeation in mycobacteria using machine learning #MicroSky
go.nature.com
Identification of chemical features for improved outer membrane permeation in mycobacteria using machine learning
Nature Microbiology, Published online: 30 June 2026; doi:10.1038/s41564-026-02412-5Screening 1,572 compounds for mycomembrane permeation plus cheminformatic and machine learning analyses reveals features associated with improved permeation in the pathogen Mycobacterium tuberculosis and model organism M. smegmatis.
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The Rockefeller University @rockefeller.edu · 24/06/2026
Chris Giuliano of the Birsoy lab has been selected as a 2026 #JCCFellow by @jcchildsfund.bsky.social! Giuliano studies how microbes share and trade nutrients to help reveal novel ways to treat cancer. Congratulations, Chris!
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The Rockefeller University @rockefeller.edu · 23/06/2026
Rockefeller's Winrich Freiwald is a 2026 winner of the Gertrud Reemtsma Foundation’s Prize for Translational Neuroscience! He is honored for his work deciphering complex neural processes in visual perception and social cognition. Congratulations!
mpg.de
Doris Tsao and Winrich Freiwald Receive the International Prize for Translational Neuroscience
Researchers are honored for their groundbreaking insights into the neural basis of face and object recognition
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Alex Merz 🇺🇸🇨🇦🇺🇦 @merz.bsky.social · 11/06/2026
Reminder — UW #Microbiology has an open search for an Assistant Professor, focusing on fundamental problems in #bacteriology! If you or someone you know would be suitable, here's the ad: apply.interfolio.com/185622
Screenshot of the job listing linked in full above
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The Rockefeller University @rockefeller.edu · 09/06/2026
The @victora.bsky.social lab at Rockefeller has turned germinal centers into a living laboratory for one of biology's oldest questions: how much of #evolution is shaped by chance? Learn more in this Q&A with Victora and graduate fellow Ashni Vora: bit.ly/4fB23bm
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The Rockefeller University @rockefeller.edu · 05/06/2026
A new study from Rockefeller's @victora.bsky.social in @cellpress.bsky.social reveals how germinal centers produce powerful antibodies through noisy rounds of mutation and selection, offering new insight into vaccine design—and larger themes in evolution. 🔗: bit.ly/3Sor6Ve
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Luiz Pedro Carvalho, PhD @luizcarvalholab.bsky.social · 04/06/2026
@agnese75.bsky.social's work is out. She shows that under iron starvation M. tuberculosis splits flux through the Krebs cycle and secretes metabolites, akin of fermentation. Why is this important? Metabolic flexibility is what makes it so hard to kill in vivo. elifesciences.org/reviewed-pre...
elifesciences.org
Mycobacterium tuberculosis partitions the Krebs cycle under iron starvation
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The Rockefeller University @rockefeller.edu · 01/06/2026
A new study from the @rocklabtb.bsky.social in @natmicrobiol.nature.com finds that one of the most common drug resistance mutations in #tuberculosis creates subtle metabolic weaknesses that could be exploited with future combination therapies. 🔗: bit.ly/3RG6wj2
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Gabriel Victora @victora.bsky.social · 29/05/2026
Happy to share our latest preprint on the clonal dynamics of GC “refueling.” We asked what happens at the clonal level after the simple (and ubiquitous) step of delivering a second vaccine dose during an ongoing GC response. www.biorxiv.org/content/10.6...
biorxiv.org
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Burroughs Wellcome Fund @bwfund.bsky.social · 29/05/2026
Now open - LOIs for the Investigators in the Pathogenesis of Infectious Disease (PATH) program. Deadline is July 16 @ 3pm ET. Faculty in US and Canada are eligible to apply Grant Amount: $505,000 over five years More information here: buff.ly/mBR4XST #bwfpath
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Christina Stallings @stallingslab.bsky.social · 29/05/2026
Very excited about our recent preprint- @lindashuyingxu.bsky.social and collabs discover that neutrophils repurpose their nucleolus for storage of pre-made IFN-I to be rapidly released via a nucleolar stress response that results in nucleolar extrusion and secretion. www.biorxiv.org/content/10.6...
biorxiv.org
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Jutras Lab @jutraslab.bsky.social · 29/05/2026
Honored to have many projects and members of the lab’s research highlighted in the most recent issue of NU magazine @feinberg.northwestern.edu. Check out how folks in our lab are tackling the many challenges associated with Lyme disease! #microsky magazine.northwestern.edu/discovery/ne...
magazine.northwestern.edu
Fighting the Uptick in Lyme Disease
Brandon Jutras, associate professor of microbiology-immunology at the Feinberg School of Medicine, has been studying Borrelia burgdorferi — the bacterium that causes Lyme disease — for over a decade. ...
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Rock Lab @rocklabtb.bsky.social · 29/05/2026
Huge congrats to @johnrubinstein.bsky.social on being elected a Fellow of the Royal Society! www.sickkids.ca/en/news/arch...
sickkids.ca
John Rubinstein elected to prestigious Royal Society
SickKids scientist Dr. Rubinstein has been elected a Fellow of the Royal Society for pioneering revolutionary imaging techniques to explore the structure and function of biological molecules.
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Patrick S. Mitchell @psmitchej.bsky.social · 25/05/2026
Thrilled to announce that the Department of Microbiology at the University of Washington, School of Medicine is hiring at the Assistant Professor level (tenure-track)! The Pacific Northwest is an awesome place to live and do science 🧪🦠. Join us! apply.interfolio.com/185622 Applications due 8/1.
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Max Gutierrez @maxgg.bsky.social · 19/05/2026
Very excited this work by Victor and Jakson @crick.ac.uk is out!! started many years ago with @jvaubourgeix.bsky.social They generated Mtb-Timer, a fluorescent reporter in Mtb as a proxy for Mtb replication and measure antibiotic responses Mtbhttps://journals.asm.org/doi/10.1128/msystems.01796-25
journals.asm.org
Mtb-Timer: a fluorescent reporter to visualize Mycobacterium tuberculosis replication and antibiotic responses | mSystems
Tuberculosis treatment is challenging in part because Mycobacterium tuberculosis (Mtb) populations are phenotypically heterogeneous. Within the same infection, bacterial cells can exist in different physiological states, from actively replicating to slow-growing or non-replicating forms. To better study these processes, we developed and validated Mtb-Timer, a fluorescent reporter that enables visualization of bacterial growth dynamics. The system is based on a fluorescent protein that changes color over time: newly synthesized protein emits green fluorescence (GFP) and gradually shifts to red (DsRed) as it matures. The green-to-red fluorescence ratio, therefore, reflects bacterial replication activity. Using microscopy and flow cytometry in both in vitro cultures and infected macrophages (in cellulo), Mtb-Timer enables the quantification of distinct bacterial subpopulations and the real-time monitoring of the green-to-red fluorescence ratio and bacterial burden during treatment with first-line antibiotics.
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Rock Lab @rocklabtb.bsky.social · 19/05/2026
Transcription attenuation amplifies collateral vulnerabilities in rifampicin-resistant Mycobacterium tuberculosis. Congrats to Kathryn, Vanisha, and all co-authors! www.nature.com/articles/s41...
nature.com
Transcription attenuation amplifies collateral vulnerabilities in rifampicin-resistant Mycobacterium tuberculosis - Nature Microbiology
A common rifampicin-resistance mutation in Mycobacterium tuberculosis alters transcription and creates new metabolic vulnerabilities through transcription attenuation, revealing potential targets to c...
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Rock Lab @rocklabtb.bsky.social · 08/05/2026
Remembering public health pioneer Barry Bloom: a scientist, a mentor, a mensch. www.statnews.com/2026/03/30/b...
statnews.com
Remembering public health pioneer Barry Bloom: a scientist, a mentor, a mensch
Marc Lipsitch and Yonatan Grad pay tribute to their former colleague and mentor Barry R. Bloom.
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Typas Lab @typaslab.bsky.social · 29/04/2026
Check our new preprint by Knopp M. et al.! Human gut microbiomes can impose strong +/- selection for resistant versions of resident opportunistic pathogens. In the case we follow up, selection is driven by altered carbohydrate utilisation that the resistant mutant evolves. doi.org/10.64898/202...
doi.org
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Prof Tanya Parish @proftanya13.bsky.social · 28/04/2026
Congratulations Valerie Mizrahi valmizrahi.bsky.social 🦠 🧪 #WomenInStem #TB www.nasonline.org/news/2026-na...
nasonline.org
National Academy of Sciences Elects Members and International Members - NAS
WASHINGTON — The National Academy of Sciences announced today the election of 120 members and 25 international members in recognition of their distinguished and continuing achievements in original res...
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The Rockefeller University @rockefeller.edu · 28/04/2026
Rockefeller's Vanessa Ruta and Thomas Tuschl have been elected to the @nasonline.org! Congratulations 🎉 🔗: bit.ly/4vTZgQ8
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Alushin Lab @alushinlab.bsky.social · 22/04/2026
Very pleased that after a rigorous (and lengthy) review process, our paper visualizing how myosin generated forces modulate actin filament structure for mechanosensitive recogntion by α-catenin has appeared in @nature.com : www.nature.com/articles/s41...
nature.com
Myosin forces remodel F-actin for mechanosensitive protein recognition - Nature
Structural studies demonstrate that myosin generates forces that cause structural changes in actin, modulating cooperative binding by α-catenin and thus signal transduction and intercellular communica...
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Gabriel Victora @victora.bsky.social · 17/04/2026
Except in GCs theonion.com/biologists-c...
theonion.com
Biologists Confirm Not Much Evolution Happened Today
STANFORD, CA—Calling it a “pretty slow one” as far as natural selection and genetic drift were concerned, biologists from Stanford University confirmed Tuesday that not much evolution happened today. ...
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PLOS Biology @plosbiology.org · 17/04/2026
Discovery of gene functions in #Mycobacterium #tuberculosis has been slow. This study tests a genome-wide barcoded #transposon library across 95 environmental conditions, providing a rich resource of new gene functions, including metabolic & resistance pathways @plosbiology.org 🧪 plos.io/4vG0mz1
Overview of RB-TnSeq screens. Top left: Schematic for RB-TnSeq screen experimental set-up. Top middle: Pie chart depicting the number of RB-TnSeq screens completed for each category. Top right: Previously published TnSeq fitness with 27ng/mL isoniazid plotted against BarSeq fitness with 25 ng/mL isoniazid. Dotted line represents linear correlation between statistically significant hits from RB-TnSeq with TnSeq. Bottom left: BarSeq fitness (log2 fold change) for sugI (Rv3331) and sugA (Rv1236). Bottom right: Cofitness data for Rv3220c and Rv1626.
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The Rockefeller University @rockefeller.edu · 16/04/2026
By editing blood stem cells, the Nussenzweig lab shows that the immune system itself can be transformed into a durable, boostable source of therapeutic proteins--opening the door to potential single-shot treatments for diseases ranging from HIV to cancer. 🔗: bit.ly/4cgDoqp
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Max Gutierrez @maxgg.bsky.social · 31/03/2026
💥Our latest @embojournal.org on membrane damage and repair. Di @dichen02.bsky.social @crick.ac.uk found that calcium is a conserved signal for ATG8/LC3 lipidation on membranes using novel probes to record calcium leakage. Congratulations Di et al! link.springer.com/article/10.1...
link.springer.com
Ca²⁺ leakage is a conserved signal for non-canonical ATG8/LC3 lipidation and membrane repair - The EMBO Journal
Endomembrane damage of intracellular vesicles triggers signals that activate membrane repair in mammalian cells to restore homeostasis. However, the signals that drive diverse membrane repair recruitm...
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Naama Aviram @naamaaviram.bsky.social · 27/03/2026
Our lab is hiring! As our fierce technician is moving on to graduate school (GO ANNA!), we’re looking for a new tech to join our team studying bacteria-phage interactions. Ideal for recent grads interested in molecular biology and microbiology - please reach out with a CV to aviramn@mskcc.org.
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Keystone Symposia @keystonesymposia.bsky.social · 27/03/2026
Now this is the future of TB research 👏 39 Keystone Symposia & @gatesfoundation.bsky.social scholarship awardees at #KSTB26. With ~1.5M TB deaths each year, these early-career scientists are driving progress through collaboration and new ideas. @maxgg.bsky.social @breealdridge.bsky.social
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Sam Benedict @sambenedict5.bsky.social · 27/03/2026
Unbelievably proud of the work that everyone has put into this paper. Really grateful for such fab colleagues! Mycobacteria continue to be (subjectively) the most interesting bacteria 🤭
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Patrick Moynihan @pmoyniha.bsky.social · 27/03/2026
We've been we've been working on this for quite a while now (hopefully published soon). Grateful to @proftracypalmer.bsky.social for concinving me & @lislowe.bsky.social that mycobacteria produce inter-bacterial toxins. Team science, led by @sambenedict5.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
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Paul Sax @paulsaxmd.bsky.social · 18/03/2026
Latest for @nejm.org, an attempt to bring much-needed attention to these challenging ID cases that for some reason receive so little attention -- NTM. #IDSky Nontuberculous Mycobacteria: The Common Infections You’ve Possibly Never Heard Of | NEJM Voices voices.nejm.org/doi/full/10....
voices.nejm.org
Nontuberculous Mycobacteria: The Common Infections You’ve Possibly Never Heard Of
Twenty facts about a surprisingly common group of infections.
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The Rockefeller University @rockefeller.edu · 19/03/2026
Most mass spectrometers still analyze molecules one or just a few at a time. Now, a new MultiQ-IT prototype from Rockefeller's Brian Chait can cool, trap, filter, and redirect over a billion ions simultaneously. 🔗: bit.ly/47FWUd6
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Rock Lab @rocklabtb.bsky.social · 17/03/2026
Angelika Amon was an inspiration, and I’m deeply grateful for my time in her lab. Please encourage PhD students outside the US who embody her excellence in research & infectious passion for biology to apply. ki.mit.edu/events/prize...
ki.mit.edu
The Angelika Amon Young Scientist Award | Koch Institute
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Alexandre Gouzy @alexandregouzy.bsky.social · 11/03/2026
I’m pleased 🤗 to share our new preprint exploring the mode of action and resistance of the antitubercular drug pyrazinamide (PZA) 💊 Thanks to everyone who have participated 🙌 We hope these findings will help the fight against drug resistance in tuberculosis. www.biorxiv.org/content/10.6...
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Typas Lab @typaslab.bsky.social · 12/03/2026
How can we tap into the enormous functional diversity of microbes on this planet? Join us at EMBL Heidelberg (8–10 Dec 2026) to learn about ongoing efforts to decode gene function and organisation in human gut microbes, and present your science.
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Alushin Lab @alushinlab.bsky.social · 09/03/2026
Very excited to share our latest preprint, where we visualize the impact of force on the catch bonding actin crosslinker α-actinin-4. Led by @tri-i.bsky.social MD-PhD student Alfred Chin, a great collaboration with Glen Hocky's lab. www.biorxiv.org/content/10.6...
Images of the protein α-actinin-4 binding actin filaments in weak and strong modes, derived from cryo-electron microscopy data. Force promotes a transition from the weak mode to the strong mode, strengthening the interaction.
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John Rubinstein @johnrubinstein.bsky.social · 06/03/2026
I've written a review on what I think is an extremely exciting direction in cryo-EM: Cryo-EM of endogenous membrane proteins in their native lipid bilayer Open access in Quarterly Reviews of Biophysics: doi.org/10.1017/S003...
Figure 1. Cryo-EM of abundant protein complexes in native membranes.Figure 2. Cryo-EM of membrane proteins in vesicles.Figure 3. 3D reconstruction of V-ATPase in native synaptic vesicle membranes.Figure 4. Generation of membrane vesicles for structure determination of proteins in their native lipid bilayer.
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Sabine Ehrt @saehrt.bsky.social · 02/03/2026
We are searching for a tenure-track junior faculty member. Join our collaborative research environment in the Department of Microbiology and Immunology at WCM. Please see the link to the job posting and distribute among your networks! apply.interfolio.com/181869
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Rock Lab @rocklabtb.bsky.social · 20/02/2026
Congrats Brendan, Clif, David, and team! www.nature.com/articles/s41...
nature.com
Discovery and development of a new oxazolidinone with reduced toxicity for the treatment of tuberculosis - Nature Medicine
MK-7762 is a new oxazolidinone antitubercular agent that is structurally similar to linezolid, and demonstrated in vivo efficacy, lesion penetration and limited toxicity compared to linezolid, indicat...
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Rock Lab @rocklabtb.bsky.social · 19/02/2026
Congrats Ruby, Bob, Liz, and team! www.sciencedirect.com/science/arti...
sciencedirect.com
Cell-free genomics reveals fundamental regulatory principles of the Mycobacterium tuberculosis transcription cycle
Tiers of gene regulation govern cellular life. The intrinsic activities of RNA polymerase (RNAP) constitute a primary tier, while direct modulation by…
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Rock Lab @rocklabtb.bsky.social · 13/02/2026
Congrats @oneyrolles.bsky.social and team!
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John Rubinstein @johnrubinstein.bsky.social · 05/02/2026
A new frontier for our lab! After many months of development by postdoc @ranaabdelaziz.bsky.social (our resident medicinal chemistry - now also an excellent structural biologist) and the staff at the SickKids Drug Discovery platform, we're conducting our first proof-of-principle inhibitor screen.
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Nature Communications @natcomms.nature.com · 02/02/2026
#Microbiology The anti-tuberculosis drug bedaquiline targets the mycobacterial ATP synthase, but how that leads to bacterial death is unclear Here the authors clarify how bedaquiline works @jnblab.bsky.social @morwan.me #TBSky #antibiotics #AMR dlvr.it/TQjZ0W
Cartoon representing the mycobacterial oxidative phosphorylation system, including cytochromes, NDH-2, and ATP synthase. Taken from Figure 1 of the article.
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