iiinova — where your digital self keeps evolving

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Virginie Uhlmann @virginieuhlmann.bsky.social · 30/04/2026

Thank you all for the incredible energy and inspiration! The OME community is a real treasure ❤️

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NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 28/04/2026

Day 1 at #OME2026 is coming to an end with stimulating discussions during the poster session. It's been a wonderful first conference day. Looking forward to tomorrow with highlights including workshops and our keynote speaker Carole Goble. Stay tuned.

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

nice to see fellow Latin American presenting on how the Smithsonian Tropival Research Institute (STRI) is using OMERO to manage data on ancient polen from the Amazon forest (at #OME2026) "the solution I have been waiting my whole life"

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NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 28/04/2026

A significant moment at #OME2026: Thanking Prof. Jason Swedlow, the founder of OME, who shaped this remarkable community work since the beginning of the millenium. His work & leadership were honored - even with a nod to his famous blue shirts by OME's Interim Board, nominated by Jason in Oct '25.

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NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 28/04/2026

Kiya Govek from The Jackson Laboratory gave the inspiring opening lecture at the #OME2026 meeting, bringing us the community contributor perspective based on her online community survey. Next up: An Update from the OME Ecosystem

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Laurent Guerard @lguerard.bsky.social · 12/03/2026

The dates are now fixed, the registration will open on Monday for a bit less than a month! If you're interested in joining or know somebody that would benefit from it, make sure not to miss the registration window!

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Elke Barbez @elkebarbez.bsky.social · 11/03/2026

Want to image apoplastic pH in plants? 🔬 Two new papers from our team offer a full workflow plus open access analysis tools. Congrats to @aroessling.bsky.social, Niklas Mayle and @lguerard.bsky.social Nature Protocols: rdcu.be/e7R2E BMC Methods: lnkd.in/dctpWJ3X Happy Imaging!

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Laurent Guerard @lguerard.bsky.social · 09/03/2026

We are happy to announce that this year's SwitZerland's Image and Data Analysis School (ZIDAS) edition will take place in person at EPFL July 5-10, 2026. We are looking forward to an interesting and inspiring week of bio-image analysis. The application process will start soon. More info here:

2026.zidas.org

ZIDAS 2026

This one-week school provides a hands-on introduction to image processing and analysis, with an emphasis on biologically relevant examples.

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Biozentrum, University of Basel @biozentrum.unibas.ch · 11/02/2026

Happy International Day of Women & Girls in Science🧪. To mark this day, we feature three female scientists from our core facilities and share their professional journeys, which reflect the diversity of careers in science. #WIS #STEM 👉 www.biozentrum.unibas.ch/research/res... youtu.be/BVkxirHBqJk

youtu.be

Women in Science 2026

YouTube video by BiozentrumBasel

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Laurent Guerard @lguerard.bsky.social · 08/07/2025

Day 2 of #Zidas2025 is happening! After a lecture from @ahklemm.bsky.social, it's now time for hands on with @ilastik-team.bsky.social by @benediktbest.bsky.social from Anna Kreshuk's lab and some tracking in the afternoon with #Trackmate from @jytinevez.bsky.social !

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Laurent Guerard @lguerard.bsky.social · 07/07/2025

And we're ON! #Zidas2025 has officially started at the @biozentrum.unibas.ch, and the first day is introduction to image formation by Arne Seitz, Fiji by Joana Delgado Martins and Fiji scripting by me !

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Laurent Guerard @lguerard.bsky.social · 04/07/2025

I couldn't find a napari plug-in to open all file formats using Bioio. So I made one : pypi.org/project/napa... Feel free to use it and suggest improvements 🎉

pypi.org

Client Challenge

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Simon F. Nørrelykke @simonfn.bsky.social · 24/03/2025

This summer, we are running a one-week intensive workshop on Python-based BioImage Analysis. Are there better ways to spend 6 days in mid-July in Boston?Probably. Would you learn as much as you will here? Probably not. Apply here: iac.hms.harvard.edu/bobiac/2025

iac.hms.harvard.edu

BoBiAC | 2025

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Nicolas Chiaruttini @nkiaru.bsky.social · 11/01/2025

Finally had a bit of time to play with multi-GPU deconvolution. Using @truenorth-ia.bsky.social and @haesleinhuepf.bsky.social previous work. Here it is in action in #BigDataViewer using async and lazy processing. Look at the two poor laptop GPUs going as fast as they can:

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Biozentrum, University of Basel @biozentrum.unibas.ch · 13/12/2024

Entry-level position (80 - 100%) for bioimage analysis specialist at the Imaging Core Facility (IMCF) of the Biozentrum, University of Basel www.biozentrum.unibas.ch/open-positio... @unibas.ch #Biozentrum #Basel #research #science #joboffer #scientific

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Laurent Guerard @lguerard.bsky.social · 13/12/2024

Come join us if you do image analysis!

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Hadas Weiss @hadas.bsky.social · 12/12/2024

sorry about that, i asked it to make sense of my life choices

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Laurent Guerard @lguerard.bsky.social · 12/12/2024

If you're scared of IA taking over your job, we probably still have a few years ahead of us 😁

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Virginia Silio @virsicas.bsky.social · 07/12/2024

Core facility microscopists assemble!

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BioVoxxel (Jan Brocher) @biovoxxel.de · 05/12/2024

#BIAToolTip No.15 On Windows there is the ColourSimulator App which allows you to simulate on your screen with a slidable window to inspect design or images to check if those are inclusive for color deficient vision. The #biovoxxel LUT Channels Tool provides a related functionality.

A screenshot showing the use of the Windows ColourSimulatons app to quickly check color blind friendly display and color usage in images. It shows one image of fluorescently stained cells while combining red, green and blue colors and another one using cyan, yellow and magenta together with the apps sliding window that simulates the color blind vision on screen. Additionally it displays the pop-up menu for the tool.

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Laurent Guerard @lguerard.bsky.social · 29/11/2024

If you have no friends, but want to play Pictionary, now, you can!

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Nicolas Chiaruttini @nkiaru.bsky.social · 27/11/2024

Why #BigDataViewer loves multi-resolution (pyramidal) formats: - Top left: Only high-res data → slow & artifacts when zoomed out. - Top right: Only low-res data → no details when zoomed in. - Bottom: All resolutions → seamless, responsive, beautiful. 🎥 #FijiSc

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Florian Jug @florianjug.bsky.social · 27/10/2023

😱📣 BlueSky-ers: WE NEED YOUR HELP!!! 🙏 All of you who ever liked a lecture of mine... All of you who liked one of the courses I teach in... All of you I work(ed) with in one way or another... All of you who see my desperation! 😜 PLEASE re-post! 🙏 careers.humantechnopole.it/o/postdoc-in...

careers.humantechnopole.it

Postdocs in Artificial Intelligence

Human Technopole (HT) is an interdisciplinary life science research institute, created and supported by the Italian Government, with the aim of developing innovative strategies to improve human health

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Harmit Singh Malik @harmitmalik.bsky.social · 19/11/2024

Posts are to be called Skywriting and threads are to be called Skydives.

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Harmit Singh Malik @harmitmalik.bsky.social · 19/11/2024

Since @markhamillofficial.bsky.social has joined Bluesky I think it totally appropriate to call ourselves Skywalkers instead of Twitterati

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Teun Huijben @teunhuijben.bsky.social · 13/11/2024

🚀Thrilled to announce #inTRACKtive: a web-based tool for exploring massive cell-tracking datasets, no software installation required! Open your browser and dive into terabytes of developmental biology data 🐭🪰🪱🪲🐠 Preprint: biorxiv.org/content/10.1... Repository: github.com/royerlab/inT... 🧵1/n

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Kevin Connor @kevintconnor.bsky.social · 09/11/2024

In an effort to bring myself (and maybe others?) some joy while working through all the feels, I’m just gonna start sharing cool stuff in my camera roll from work like these bloody-belly comb jellies found only in the #deepsea & @montereyaq.bsky.social www.montereybayaquarium.org/animals/anim...

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Tobias Lenz @biotobi.bsky.social · 29/10/2024

Fantastic resource for bio icons: NIH Bioart Source Build figures, presentations, and illustrations with 2,000+ science and medical art visuals. This collection of high-quality, scientifically accurate vectors, #icons, and brushes is freely available within the public domain. bioart.niaid.nih.gov

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Jean-Yves Tinevez @jytinevez.bsky.social · 17/10/2023

Last days to apply! Deadline is tomorrow

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