iiinova — where your digital self keeps evolving

Reposted by Tiago Lubiana

Open Source for Science Fund @os4science.org · 19/05/2026

📣 The inaugural Open Source for the Life Sciences funding opportunity is live! We're hosting two information sessions to help you learn more, ask questions, and understand the application process. Sessions cover the same content, register for whichever time is most convenient:

Banner describing two information sessions for the Open Source for the Life Sciences call for proposals. More details on the schedule in the thread.

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Tiago Lubiana @tiagolubiana.bsky.social · 26/05/2026

this is a map of the OME-Zarr contributors so far! nice to see different regions — and the opportunities for the community growth are you in one of the gray countries and interested in advanced microscopy data projects? talk to me :) +

map of the world in equal earth projection showin the contributors to OME-Zarr

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Tiago Lubiana @tiagolubiana.bsky.social · 26/05/2026

I had much fun today at the OME-NGFF community call. So good to see the progress of the community. I _really_ like those — so I woke up 4am for the first one and I am exicted for the second round in about 6 hours :) forum.image.sc/t/join-us-fo... #OME-Zarr #microscopy

forum.image.sc

Join us for the next OME-NGFF Community Call on Tuesday May 26, 2026 9:00 CET and 17:00 CET!

Awesome! Adding the formatted dates for auto conversion just in case 🙂 : 2026-05-26T07:00:00Z (UTC)→2026-05-26T08:00:00Z (UTC) - Launch Meeting - Zoom 2026-05-26T15:00:00Z (UTC)→2026-05-26T16:00:00...

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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026

Linda Chaabane in the name of @eurobioimaging.bsky.social introducing the last session of the @gideproject.bsky.social plenaries! An absolutely fantastic project & event

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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026

@guillaumegay.bsky.social from France BioImaging showing the architecture of their BioImage Cloud with OMERO integration. ..and working towards "distributing better the future". Nice quote!

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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026

More nice talks about the @bioimagearchive.bsky.social by Teresa Zulueta Coarasa, including an overview the standards MIFA and REMBI for imaging metadata and the pipeline for conversion of data into OME-Zarr

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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026

Erin Diel now presenting on the mutualistic relation of Glencoe Software and the Open Microscopy Environment and the contributions of Glencoe towards OME-Zarr 1.0 #GIDE2026

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Reposted by Tiago Lubiana

Image Cooperative @image.coop · 06/05/2026

Member Eric Perlman takes the stage at @embl.org to announce our launch as an international worker co-op for #OSS scientific imaging software. First task supported by @biohub.org is accelerating #OMEZarr towards a 1.0 alpha early 2027. Stay tuned! image.coop #GIDE2026 @gideproject.bsky.social

A screenshot of Eric's title slide, saying "The role of COOPeration in global imaging. Eric Perlman. Member, Image Cooperative" in Atkinson Hyperlegible font in black on white. The footer is a subtle pink-to-green bar with the hexagonal ball as a separator. The text in the footer says "Image Cooperative Ltd."

A photo of Eric behind the mic at EMBL with the first slide as described in the other image being shown by the projector.

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Reposted by Tiago Lubiana

NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 06/05/2026

What's new in Ome-Zarr 0.6? Ome-Zarr is a cloud-optimised next-generation file format #NGFF for bioimaging, aiming to increase #FAIR access and remove barriers in the scientific process. The latest version offers numerous improvements and features. 👉 Find out more on Zenodo: doi.org/10.5281/zeno...

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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026

Tim Olsen from XNAT showing the 27 years of progress of a platform used all over the world for clinical and pre-clinical imaging (a "DICOM repository" and much more) #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026

last day of plenary sessions at #GIDE2026 now Anna Klemm from @scilifelab.se and the bioimage analysis infrastructure in Sweden

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026

today we also saw the vision of a bioimage index project with AI-readiness at the raw data level a nice presentation by Chi-Li Chiu (@biohub.org), and right in time to share the hot news on the @os4science.org fund

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Reposted by Tiago Lubiana

Josh Moore @joshmoore.bsky.social · 05/05/2026

„A data ecosystem is not only about sharing data, but about creating trust, capacity, and value in the communities where data originates.“ -Andrea Lara, Guatemala 🤩👏🏼

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026

what a panel! closing session for today at @gideproject.bsky.social with diverse voices on the global community efforts for bio data sharing #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026

Great data presentation by @caronjacobs.bsky.social and the African BioImaging Consortium. In the image, the distribution of research microscopes used in African institutions #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026

Chris Wood and the origins of Latin American BioImaging at #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026

shoutout to @openmicroscopy.org by Katy Wolstencroft in the context of NL-Bioimaging (at #GIDE2026)

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026

I love this slide from Matthew Hartley (@bioimagearchive.bsky.social) on the repositories behind the last 50+ years of biodata management (at @gideproject.bsky.social)

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Reposted by Tiago Lubiana

Dario Taraborelli @dartar.bsky.social · 04/05/2026

We built a thing ✨ Check it out:

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Tiago Lubiana @tiagolubiana.bsky.social · 04/05/2026

@emmy-ft.bsky.social from @investinopen.bsky.social showing insights into the structural risk patterns & sustainable strategies for funding scientific (digital) infrastructure at @gideproject.bsky.social. also happy to see Emmy again! Long time since the @elife.bsky.social innovation sprint 2019!

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Tiago Lubiana @tiagolubiana.bsky.social · 04/05/2026

nice to see Jason Swedlow showing the advances and vision of @biohub.org for imaging data @ @gideproject.bsky.social 2026 particularly happy to see mentions of the tech parts around the FBbi ontology and the ideas for needs of bioimaging search capabilities

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Tiago Lubiana @tiagolubiana.bsky.social · 04/05/2026

Thomas Lemberger from @embo.org discussing the advances in AI checks/reviews in (open) bio publishing at #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 04/05/2026

Michael Arentoft from the @ec.europa.eu with an overview of the support for european-global collaborations for AI-ready science datasets #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 04/05/2026

Jan Korbel showing their semi-autonomous AI + bioimaging workflow, with rich analogies to self driving cars #GIDE2026

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Tiago Lubiana @tiagolubiana.bsky.social · 04/05/2026

@gideproject.bsky.social community event starting right now in the stunning @embl.org in Heidelberg

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Reposted by Tiago Lubiana

NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 29/04/2026

#OME2026 day 2 opens with Shuichi Onami from RIKEN, Kobe, Japan, speaking about SSBD, an infrastructure for sharing biological dynamics data. SSBD combines repository functionality based on minimum required metadata with an added-value database containing richly curated datasets for optimal reuse.

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Tiago Lubiana @tiagolubiana.bsky.social · 29/04/2026

@carolegoble.bsky.social and an amazing track record of work on digital research infrastructures #OME2026

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Reposted by Tiago Lubiana

NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 28/04/2026

Day 1 at #OME2026 is coming to an end with stimulating discussions during the poster session. It's been a wonderful first conference day. Looking forward to tomorrow with highlights including workshops and our keynote speaker Carole Goble. Stay tuned.

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

now @will-j-moore.bsky.social and the new developments in ome-zarr.js github.com/BioNGFF/ome-... #OME2026

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

now Aastha Mathur presenting on all the interoperability brought by @gideproject.bsky.social #OME2026

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

Now flash poster talks at #OME2026! Including Isabel Kemmer presenting about the awesome @eurobioimaging.bsky.social

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

nice to see fellow Latin American presenting on how the Smithsonian Tropival Research Institute (STRI) is using OMERO to manage data on ancient polen from the Amazon forest (at #OME2026) "the solution I have been waiting my whole life"

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

OMERO for material sciences (with RDF!) at #OME2026

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Tiago Lubiana @tiagolubiana.bsky.social · 28/04/2026

@tom-bssnnt.bsky.social's slides are pure gold

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Reposted by Tiago Lubiana

NFDI4BIOIMAGE @nfdi4bioimage.bsky.social · 28/04/2026

It's on! #OME2026 kicking off at Haus der Universität in Düsseldorf! @sweidtkamp.bsky.social opened this exciting community event, looking ahead at three days of exchange to shape bioimage data management as an international collaborative endeavor.

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Reposted by Tiago Lubiana

Siobhan Leachman @siobhanleachman.bsky.social · 05/12/2025

Congratulations to @tiagolubiana.bsky.social for shepherding our paper to publication & to all my wonderful co-authors. "Wiki Loves iNaturalist: How Wikimedians Integrate iNaturalist Content on Wikipedia, Wikidata, and Wikimedia Commons" can be read here doi.org/10.3897/biss...

doi.org

Wiki Loves iNaturalist: How Wikimedians Integrate iNaturalist Content on Wikipedia, Wikidata, and Wikimedia Commons

With over 50 million observations per year, iNaturalist is one of the world's most successful citizen science projects, uniting millions of people worldwide in observing, sharing, and identifying natu...

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Reposted by Tiago Lubiana

German BioImaging @gerbi-gmb.de · 12/11/2025

OME-NGFF Hackathon in Zürich just started! We're organizing ourselves to dig into various topics during the next few days. Let's shape the future of microscopy image data standards together. #OME-NGFF_Hackathon #GerBI

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Reposted by Tiago Lubiana

Nicole Kearney @nicolekearney.bsky.social · 23/10/2025

The wonderful speakers from @tiagolubiana.bsky.social’s #Wikimedia & #BiodiversityData session at #LivingData2025 (we also had the fabulous @siobhanleachman.bsky.social online). 🧪🔗🌎👩🏼‍💻 @rdmpage.bsky.social @svmering.bsky.social @biodivlibrary.bsky.social @wikimediafoundation.org

10 people standing in from of a presentation screen, each making the shape of a “W” with their hands.

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Reposted by Tiago Lubiana

Flo Grattarola @flograttarola.bsky.social · 21/10/2025

Que legal @tiagolubiana.bsky.social 🇧🇷 ! Connecting Wikimedia + iNaturalist 💚 #LivingData2025

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Reposted by Tiago Lubiana

Siobhan Leachman @siobhanleachman.bsky.social · 09/09/2025

My amazing #Wiki colleague @tiagolubiana.bsky.social has released this lovely video on the #BHLImageExporer. This tool (bhl-gallery.toolforge.org) explores @biodivlibrary.bsky.social images in #Wikicommons. It facilities image reuse in the #Wikiverse. www.youtube.com/watch?v=XK9i... #ILoveBHL

youtube.com

The BHL Image Explorer — A search tool for public domain biodiversity images

YouTube video by Tiago Lubiana

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Tiago Lubiana @tiagolubiana.bsky.social · 25/08/2025

Late to share here on bsky, but so happy with this award! Also: ISB is a beautiful society; if you care about organizing bio data/knowledge, you might benefit from joining it!

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Reposted by Tiago Lubiana

Claire Boardman @claireboardman.bsky.social · 14/05/2025

It's bedtime but I can't drag myself away from the Biodiversity Heritage Library!

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Tiago Lubiana @tiagolubiana.bsky.social · 23/04/2025

I haven't shared much here lately, but I've been developing this tool over the past few months. A fun way to navigate the intersection of @biodivlibrary.bsky.social and Wikimedia Commons bhl-gallery.toolforge.org

bhl-gallery.toolforge.org

BHL Image Explorer

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