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Geo Santiago-Martínez

@geosantiagom.bsky.social
2.3K followers 3.2K following 237 posts

Asst. Prof. at MCB UConn 🔬🧬🏳️‍🌈 (He/él) #newPI Microbial Ecophysiology Lab microbial-ecophysiology-lab.mcb.uco… Mexican & Indigenous, 1st gen #Methane #Microbes #Methanogen #Archaea #Microbiome #ArchaeaPower #OneHealth #Astrobiology #Proteins

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Reposted by Geo Santiago-Martínez
Alex Crits-Christoph @acritschristoph.bsky.social · 05/10/2026
How the discovery of microbial opsins led to the development of optogenetics www.cell.com/cell/fulltex... Here is a nice article on the origin of optogenetics in microbial rhodopsins, and first of all were the haloarchaea:
cell.com
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Reposted by Geo Santiago-Martínez
Evgenii Protasov @evgenii-protasov.bsky.social · 06/10/2026
Archaeal methanogenesis in a deep terrestrial aquifer driven by Methanothermobacter tomskensis sp. nov #microbiology #methanogens #methane #NewSpecies #MicroSky www.frontiersin.org/journals/mic...
frontiersin.org
Frontiers | Archaeal methanogenesis in a deep terrestrial aquifer driven by Methanothermobacter tomskensis sp. nov
Methanogenic archaea, capable of producing organic matter from hydrogen and CO2 emanating from the mantle, constitute one of the key functional groups of mic...
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Reposted by Geo Santiago-Martínez
Evgenii Protasov @evgenii-protasov.bsky.social · 07/10/2026
Redox distribution of Asgard archaea and co-occurring taxa in microbial mats from an early Proterozoic ecosystem analog #microbiology #archaea #evolution #MicroSky www.nature.com/articles/s41...
nature.com
Redox distribution of Asgard archaea and co-occurring taxa in microbial mats from an early Proterozoic ecosystem analog - npj Biofilms and Microbiomes
npj Biofilms and Microbiomes - Redox distribution of Asgard archaea and co-occurring taxa in microbial mats from an early Proterozoic ecosystem analog
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Reposted by Geo Santiago-Martínez
Aviva Brueckner @avivavbrueckner.bsky.social · 08/10/2026
1.5b yrs ago a microbe from the Asgard Archaeon Group engulphed a bacterium-and didn’t metabolized it. It pathed the way for all complex life on the planet. Why? Collective intelligence. Part 39 of The Philosophy of @debharkness.bsky.social All Souls Series avibrueckner.substack.com/p/the-philos...
avibrueckner.substack.com
The Philosophy of Deb Harkness' All Souls Series
Part 39 - Archaeon & Bacterium or Why Did the Vampire Not Eat the Witch
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Reposted by Geo Santiago-Martínez
Cameron Thrash @jcamthrash.bsky.social · 06/10/2026
Bacteria regulate collective behaviour by mechanosensing cell–cell collisions www.nature.com/articles/s41... #jcampubs
nature.com
Bacteria regulate collective behaviour by mechanosensing cell–cell collisions - Nature Microbiology
Density-dependent regulation of collective order through collision sensing and collision-induced reversals provides a navigational advantage to Pseudomonas aeruginosa during surface colonization and n...
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Geo Santiago-Martínez @geosantiagom.bsky.social · 03/10/2026
I will be visiting Rutgers University–New Brunswick on Wednesday October 7th! #archaea
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Reposted by Geo Santiago-Martínez
Nature @nature.com · 30/09/2026
Nature research paper: A methanogen hydrolase reveals the structure of archaeal peptidoglycan go.nature.com/4xN3B7j
go.nature.com
A methanogen hydrolase reveals the structure of archaeal peptidoglycan - Nature
ArmA from Methanobrevibacter smithii, a dominant member of the human gut microbiome, is identified and characterized as a glycosyl hydrolase specific for cleaving the cell wall of methanogens, revealing an unsuspected chemical structure of archaeal peptidoglycan that includes a previously unidentified sugar.
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Reposted by Geo Santiago-Martínez
Svetlana Dodonova @dodonova-sveta.bsky.social · 30/09/2026
New preprint from Dodonova lab 🔔! Capturing multiple states by cryo-EM❄️, we show for the first time how archaeal RNA Polymerase engages a nucleosome and forms direct contacts with histones! 🧬 Great work by Gabriele & a fantastic collaboration with Dina Grohmann! 🧵 www.biorxiv.org/content/10.6...
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Khaled_Selim Lab @selimlab.bsky.social · 30/09/2026
A wonderful talk by Thijs J. G. Ettema @ettema.bsky.social on Asgard archaea @mibinet.bsky.social conference @hhu.de
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Reposted by Geo Santiago-Martínez
Cameron Thrash @jcamthrash.bsky.social · 30/09/2026
Dynamic protrusions mediate crawling motility in Asgard archaea www.nature.com/articles/s41... #jcampubs
nature.com
Dynamic protrusions mediate crawling motility in Asgard archaea - Nature
Anoxic live-cell imaging shows actin-dependent crawling motility and dynamic protrusions in Asgard archaea, providing insights into cellular innovations that may have contributed to eukaryotic evoluti...
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Reposted by Geo Santiago-Martínez
STCmicrobeblog @stcmicrobeblog.bsky.social · 30/09/2026
👇already featured in STC... but still stunning👀 #MicroSky #Archaea #ArchaeaSky
smallthingsconsidered.blog
Cul­ti­vat­ing the An­ces­tors… in Mo­tion
What electron microscope images hint at, but can only be seen in videos: how 'Asgard' archaea move.
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Climate, Ecology, War & More: Dr. Glen Barry BigEarthData.ai @bigearthdata.ai · 01/10/2026
Dynamic protrusions mediate crawling motility in Asgard archaea ->Nature | More on "Asgard archaea crawling motility mechanisms" at BigEarthData.ai
nature.com
Dynamic protrusions mediate crawling motility in Asgard archaea
Cultivation of Ca. L. ossiferum and M. peptidophilum Ca. L. ossiferum enrichment cultures were grown protected from light in lokiarchaeal media in sealed, pressurized serum bottles in an 80:20% N2:CO2 atmosphere (0.3 bars) at 20 °C without shaking, as described previously7. The growth medium composition (per litre) was as follows: 20.7 g NaCl, 5 g MgCl2·6H2O, 2.7 g NaHCO3, 1.36 g CaCl2·2H2O, 0.54 g NH4Cl, 0.14 g KH2PO4, 0.03 g Na2S·9H2O, 0.03 g cysteine·HCl, 0.5 ml of acid trace element solution, 0.5 ml of alkaline trace element solution, 1 ml Se/W solution, 0.1% casein hydrolysate (w/v). The acid trace element solution contained (per litre): 1.49 g FeCl2·4H2O, 0.062 g H3BO3, 0.068 g ZnCl2, 0.017 g CuCl2·H2O, 0.099 g MnCl2·4H2O, 0.119 g CoCl2·6H2O, 0.024 g NiCl2·6H2O and 4.106 ml of 37% HCl. The alkaline trace element solution contained (per litre): 0.017 g Na2SeO3, 0.033 g Na2WO4, 0.021 g Na2MoO4 and 0.4 g NaOH. The pH was adjusted to 7.5, and the medium was supplemented with ampicillin, kanamycin and streptomycin (200 μg ml−1 each). The cultures were continuously passaged into serum flasks containing fresh medium—typically using an early stationary-phase culture as inoculum (1:10 dilution). Growth of L. ossiferum cultures was monitored by...
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Reposted by Geo Santiago-Martínez
Evgenii Protasov @evgenii-protasov.bsky.social · 01/10/2026
Unraveling the coastal marine plastisphere archaeome #microbiology #plastic #archaea #MicroSky @natcomms.nature.com www.nature.com/articles/s41...
nature.com
Unraveling the coastal marine plastisphere archaeome - Nature Communications
Plastic pollution creates new habitats for microbes in the ocean, but little is known about how it affects archaea. Here, the authors characterized the plastisphere archaeome and the associated potent...
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Reposted by Geo Santiago-Martínez
Evgenii Protasov @evgenii-protasov.bsky.social · 01/10/2026
Evolutionary diversification and metabolic adaptations of ANME-1 archaea #archaea #evolution #microbiome #MicroSky @microbiomej.bsky.social link.springer.com/article/10.1...
link.springer.com
Evolutionary diversification and metabolic adaptations of ANME-1 archaea - Environmental Microbiome
Anaerobic methanotrophic archaea (ANME) of the ANME-1 clade are pivotal regulators of the global carbon cycle, yet the genomic basis underlying their ecological diversification and broad environmental...
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Reposted by Geo Santiago-Martínez
Andreas P.M. Weber 🌾🌱🧬 @apmweber.bsky.social · 01/10/2026
Asgard archaea can actively crawl, using protrusions that are filled with an actin-based "cytoskeleton". Speed in the range of µm / s. www.nature.com/articles/s41...
nature.com
Dynamic protrusions mediate crawling motility in Asgard archaea - Nature
Anoxic live-cell imaging shows actin-dependent crawling motility and dynamic protrusions in Asgard archaea, providing insights into cellular innovations that may have contributed to eukaryotic evoluti...
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Reposted by Geo Santiago-Martínez
Archaea Biology Vienna @archaea-vienna.bsky.social · 30/09/2026
Congrats to Dimitri and all co-authors on their new publication! Common Nitrification Inhibitors Exhibit Distinct Mechanisms on the Ammonia-Oxidizing Archaeon Nitrososphaera viennensis A great and in-depth look at SNIs and AOA! @dimdalk.bsky.social #archaea #omics doi.org/10.1021/acs....
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Archaea Biology Vienna @archaea-vienna.bsky.social · 01/10/2026
Our paper on the dynamics of Asgard archaea (Promethearchaeota) is now out in Nature! Huge thanks to the reviewers for helping make the manuscript stronger. www.nature.com/articles/s41... Two “Lokis” stained for Lokiactin (FastAct, magenta), reaching toward each other to celebrate 🎉 #archaea
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Philipp Radler @radler92.bsky.social · 01/10/2026
The first paper of my PostDoc in Christa Schlepers group (@archaea-vienna.bsky.social) on the dynamics of Asgard archaea is now out in Nature! www.nature.com/articles/s41... This was a great team effort and I am looking forward to uncover the complex behavior of these cells further!
nature.com
Dynamic protrusions mediate crawling motility in Asgard archaea - Nature
Anoxic live-cell imaging shows actin-dependent crawling motility and dynamic protrusions in Asgard archaea, providing insights into cellular innovations that may have contributed to eukaryotic evoluti...
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Reposted by Geo Santiago-Martínez
Nature Communications @natcomms.nature.com · 25/09/2026
Prochlorococcus cyanobacteria form biofilms on particles & dynamically transition between free-living and attached states with significantly different physiology That impacts carbon release, thus suggesting a role in carbon export to the deep sea @mitcee.bksy.social #phytoplankton #biofilm #oceans
dlvr.it
Biofilm formation and dynamics in the marine cyanobacterium Prochlorococcus - Nature Communications
In this study, the authors show that Prochlorococcus picocyanobacteria form biofilms and dynamically transition between free-living and attached states with significantly different physiology, thus suggesting a role for these bacteria in deep-ocean carbon export.
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Reposted by Geo Santiago-Martínez
Simonetta Gribaldo @sgribaldo.bsky.social · 23/09/2026
Interested in #archaea, #methane, #cell-envelopes? New paper out @nature.com ! We discovered an enzyme that specifically cleaves the cell wall of methanogens, revealing a new chemical structure of archaeal peptidoglycan, 50 yrs after its first description www.nature.com/articles/s41... #MicroSky 🧵👇
nature.com
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Reposted by Geo Santiago-Martínez
CIBSS – Centre for Integrative Biological Signalling Studies @cibss.bsky.social · 24/09/2026
🚨🧪 Paper alert: Archaeal cell wall structure revised! An international research team including #CIBSS members identified a first hydrolase specific to archaeal peptidoglycan, allowing them profound insights into its structure. 🔗 Read more 👇 #Archaea #Peptidoglycan @pasteur.fr
nature.com
A methanogen hydrolase reveals the structure of archaeal peptidoglycan - Nature
ArmA from Methanobrevibacter smithii, a dominant member of the human gut microbiome, is identified and characterized as a glycosyl hydrolase specific for cleaving the cell wall of methanogens, reveali...
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Reposted by Geo Santiago-Martínez
César Sánchez @twistedbacteria.bsky.social · 24/09/2026
A methanogen hydrolase reveals the structure of archaeal peptidoglycan www.nature.com/articles/s41... 🦠 Shareable link to read the paper: rdcu.be/FJXrUPAdeswa
nature.com
A methanogen hydrolase reveals the structure of archaeal peptidoglycan - Nature
ArmA from Methanobrevibacter smithii, a dominant member of the human gut microbiome, is identified and characterized as a glycosyl hydrolase specific for cleaving the cell wall of methanogens, reveali...
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Reposted by Geo Santiago-Martínez
Evgenii Protasov @evgenii-protasov.bsky.social · 24/09/2026
A methanogen hydrolase reveals the structure of archaeal peptidoglycan #Archaea #Methanogens #methane #GutMicrobiota #Microbiome #MicroSky #ArchaeaSky @nature.com doi.org/10.1038/s415...
doi.org
A methanogen hydrolase reveals the structure of archaeal peptidoglycan - Nature
ArmA from Methanobrevibacter smithii, a dominant member of the human gut microbiome, is identified and characterized as a glycosyl hydrolase specific for cleaving the cell wall of methanogens, reveali...
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Reposted by Geo Santiago-Martínez
Cameron Thrash @jcamthrash.bsky.social · 24/09/2026
A methanogen hydrolase reveals the structure of archaeal peptidoglycan www.nature.com/articles/s41... #jcampubs
nature.com
A methanogen hydrolase reveals the structure of archaeal peptidoglycan - Nature
ArmA from Methanobrevibacter smithii, a dominant member of the human gut microbiome, is identified and characterized as a glycosyl hydrolase specific for cleaving the cell wall of methanogens, reveali...
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Reposted by Geo Santiago-Martínez
Cameron Thrash @jcamthrash.bsky.social · 21/09/2026
Domain classification of archaeal proteomes reveals conserved fold repertoire journals.plos.org/ploscompbiol... #jcampubs
journals.plos.org
Domain classification of archaeal proteomes reveals conserved fold repertoire
Author summary Archaea are the least-studied of the three domains of life, yet they matter enormously: they flourish in extreme environments, drive global nutrient cycles, and are closely tied to the ...
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Reposted by Geo Santiago-Martínez
Mozammel Hoque @mozammel.bsky.social · 20/09/2026
1/ New paper out in ISME Communications now in full version. Bacteria rarely live alone in nature, so we ran a 6-month evolution experiment asking what happens when species are forced to share the same biofilm. Turns out, company changes everything. 🧵 doi.org/10.1093/isme...
doi.org
Mixed-species interactions constrain diversification and shape biofilm evolution
Abstract. Experimental evolution provides a powerful framework for dissecting how ecological interactions shape adaptive trajectories. Here, we evolved Kle
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Evgenii Protasov @evgenii-protasov.bsky.social · 18/09/2026
We also characterized our own isolate obtained from a cockroach, naming it Methanomonile shimae after Seigo Shima @mpimicrobiomarburg.bsky.social, recognizing his notable contributions to the biochemistry of #methanogenesis.
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Evgenii Protasov @evgenii-protasov.bsky.social · 18/09/2026
When genus deserves to be a family 🦠🔬 Recent phylogenomic analyses showed that the genus Methanobrevibacter is severely underclassified. We propose reclassifying it into a family, Methanobrevibacteraceae consisting of 11 genera. @microbiologysociety.org #MicroSky #Archaea doi.org/10.1099/ijse...
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BejaLabTechnion @bejalab.bsky.social · 18/09/2026
An Asgard archaeon from a modern analog of ancient microbial mats www.sciencedirect.com/science/arti...
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SchmitzStreitsLAB @schmitzstreitslab.bsky.social · 18/09/2026
Today in CellCellPress 🥂collaborating across 3 continents to study how organisms at the extremes use RNA modifications, discovered the first natural modification of the RNA backbone, phosphorothioates and their writers. @SchragaSchwartz & several archaeal labs-thanks for being part of the team !
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Nature @nature.com · 19/09/2026
Asgard archaea, named for the realm of the Norse gods, changed scientists' views on the origins of eukaryotes go.nature.com/4j9qxtQ
go.nature.com
These bizarre, much-coveted microbes are revealing the origins of complex life
Nature - Researchers are racing to culture a menagerie of exotic organisms and finding lots of surprises along the way.
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Evgenii Protasov @evgenii-protasov.bsky.social · 10/09/2026
The structure of a nitrogenase from a hyperthermophilic methanogen growing at 92 °C sheds light on how nitrogen fixation evolved 🧫🔥 #Microbiology #Methanogens #StructuralBiology #Evolution #Nitrogenase #MicroSky #ArchaeaSky @natcomms.nature.com doi.org/10.1038/s414...
doi.org
Molecular basis of N2 fixation in a hyperthermophilic archaeon - Nature Communications
Nitrogenases are enzymes that convert atmospheric N2 into ammonia, thus providing bioavailable nitrogen to living organisms. Here, Maslać et al. describe a highly thermostable, simple nitrogenase from...
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Michael Wagner @michiwagner4.bsky.social · 04/09/2026
Who knew ammonia-oxidizing archaea could be “flexitarians”? Our new study in Science Advances shows that #AOA living inside marine sponges can assimilate branched-chain amino acids, an unexpected talent that may even shape how they interact with their hosts 🧽🤝🦠 🎉 www.science.org/doi/10.1126/...
science.org
Branched-chain amino acid assimilation enables mixotrophy of ammonia-oxidizing archaeal sponge symbionts
Marine sponges and ammonia-oxidizing archaea (AOA) represent one of the earliest animal-microbe symbioses. AOA are considered metabolically constrained chemolithoautotrophs that remove nitrogenous was...
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Evgenii Protasov @evgenii-protasov.bsky.social · 02/09/2026
Why are archaea not pathogenic? A hypothesis based on metabolism-habitat covariation #microbiology #archaea #pathogens #MicroSky @asm.org journals.asm.org/doi/full/10....
journals.asm.org
Why are archaea not pathogenic? A hypothesis based on metabolism-habitat covariation | mBio
Pathogenicity—the ability to cause infectious disease—is widespread among bacteria and eukaryotes but conspicuously absent from archaea, the third domain of life. To understand why archaea are non-pat...
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Reposted by Geo Santiago-Martínez
MicroSeq2026 @microseqasm.bsky.social · 03/09/2026
🖥️Our final medium speaker for #MicroSeq2026 is @gbouras13.bsky.social, introducing Baktfold, which integrates protein structure into the #automated functional annotation of microbial genomes at higher sensitivity than any existing methods - especially for #archaea! #bioinformatics
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Rightardia @rightardia.bsky.social · 03/09/2026
A newly discovered microbe living inside ancient stromatolite communities may offer a glimpse of how complex life first emerged. Researchers found an Asgard archaeon physically connected to a bacterium, with the two microbes appearing to exchange nutrients and other compounds.
sciencedaily.com
Ancient “living fossils” may reveal how complex life began
A newly discovered microbe living inside ancient stromatolite communities may offer a rare look at how complex life first emerged. Researchers captured the first direct images of an Asgard archaeon ph...
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Gunnar De Winter @gunnardewinter.bsky.social · 04/09/2026
Yet another tantalizing clue that our ancient roots may be found in Asgard(ian archaea)! #science #biology #evolution #microbiology
cell.com
An Asgard archaeon from a modern analog of ancient microbial mats
A novel Asgard archaeon, Nerearchaeum marumarumayae, is present in microbial mats in Shark Bay, Australia. Combining genomic and structural analyses, together with high-resolution electron cryotomogra...
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Reposted by Geo Santiago-Martínez
Howard Lee @hlee.bsky.social · 04/09/2026
Researchers captured the first direct images of an Asgard archaeon physically connected to a bacterium ⚒️🧪 www.sciencedaily.com/releases/202...
sciencedaily.com
Ancient “living fossils” may reveal how complex life began
A newly discovered microbe living inside ancient stromatolite communities may offer a rare look at how complex life first emerged. Researchers captured the first direct images of an Asgard archaeon ph...
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Reposted by Geo Santiago-Martínez
Alisa Bokulich @alisabokulich.bsky.social · 04/09/2026
"newly discovered microbe living inside ancient stromatolite communities may offer a rare look at how complex life first emerged...an Asgard archaeon physically connected to a bacterium...Scientists think similar partnerships billions of years ago may have helped produce the 1st complex cells #HPBio
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AcadeMax @academaxjournals.bsky.social · 04/09/2026
A fascinating glimpse into the microbial world! 🧬 Thank you @hlee.bsky.social for sharing. An Asgard archaeon connected to a bacterium offers clues about interactions that may have shaped complex life. Follow @academaxjournals.bsky.social for related research. #Academax #ZJUP #CellBiology
bsky.app
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Corrie Moreau @corriemoreau.bsky.social · 03/09/2026
NSF just posted the call for the annual Postdoctoral Research Fellowships in Biology (PRFB). You must propose a project to apply AI to biological research. Deadline is Sep 29, 2026 www.nsf.gov/funding/oppo...
nsf.gov
Postdoctoral Research Fellowships in Biology (PRFB)
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Jeremy Berg @jeremymberg.bsky.social · 02/09/2026
Less immediately, I am hearing that NIH is overwhelmed with applications (not surprisingly) and they are sufficiently short-staffed in CSR that they will continue with the only discussing 1/3 (rather than 1/2) of the applications. There apparently will be a Notice about this soon. 3/3
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Evgenii Protasov @evgenii-protasov.bsky.social · 01/09/2026
Oxygen production as an electron overflow pathway in ammonia-oxidizing archaea #microbiology #archaea #ammonia #MicroSky @science.org www.science.org/doi/10.1126/...
science.org
Oxygen production as an electron overflow pathway in ammonia-oxidizing archaea
Ammonia-oxidizing archaea (AOA) are widespread in nature and contribute to global carbon and nitrogen cycling. Although their energy production is an aerobic process, AOA occur in environments of low ...
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Reposted by Geo Santiago-Martínez
bioRxiv Molecular Biology @biorxiv-molbio.bsky.social · 01/09/2026
Structural basis for catalytic and inhibitory divergence between archaeal and bacterial ammonia monooxygenases www.biorxiv.org/content/10.64898/20…
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Jeremy Berg @jeremymberg.bsky.social · 01/09/2026
Continuing Resolution to fund most of the government through December 11. Not a surprise since Congress does not want a shutdown before the midterms. Blocks the OMB grant-making changes from going into effect (but they are already doing it anyway). [Gift Link] www.nytimes.com/2026/09/01/u...
nytimes.com
House Votes to Avert Government Shutdown Before Midterm Elections (Gift Article)
Lawmakers sent the legislation to President Trump in an overwhelming vote, reflecting bipartisan enthusiasm around punting a messy spending fight until after the midterms.
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Evgenii Protasov @evgenii-protasov.bsky.social · 27/08/2026
Cofactor F420 Tail Length Diversity in Specific Representatives of the Class Methanosarcinia During Acetoclastic and Methylotrophic Methanogenesis: Deciphering Structural Variations #microbiology #methanogens #methane #methanogenesis #MicroSky #ArchaeaSky www.sciencedirect.com/science/arti...
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Nobuto Takeuchi @nobuto.bsky.social · 28/08/2026
Sharing our new paper, led by PhD student Daniel Harrison. We propose that archaea aren't pathogenic because those living in eukaryotic hosts lack a metabolic prerequisite, and those with the prerequisite don't live in eukaryotic hosts. #microsky doi.org/10.1128/mbio...
journals.asm.org
Why are archaea not pathogenic? A hypothesis based on metabolism-habitat covariation | mBio
Pathogenicity—the ability to cause infectious disease—is widespread among bacteria and eukaryotes but conspicuously absent from archaea, the third domain of life. To understand why archaea are non-pat...
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Henry Gee 亨利·纪 @endofthepier.bsky.social · 30/08/2026
A eukaryote contemplating its deep archaeal ancestry, recently.
Cat sitting next to article entitled 'Archaea and the origin of eukaryotes'.
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Philip Amies @philipamies.eurosky.social · 24/08/2026
last universal common ancestor (LUCA) If bacteria and archaea originated separately what does LUCA mean, www.science.org/doi/10.1126/...
science.org
Intermediate stages in the origin of metabolism at a phosphorylating hydrothermal vent
Enzymatic metabolism emerged from metal-catalyzed, aqueous reactions of H2, CO2, NH3 and phosphite at a hydrothermal vent.
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Never stop poasting @persistentpoasting.bsky.social · 24/08/2026
Archaea are so neat. Just chill little guys that don't cause disasse
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