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Gabriele Picco

@gabrielepicco.bsky.social
162 followers 52 following 25 posts

Senior Staff Scientist @sangerinstitute. Passionate about cancer genetics, functional genomics and precision medicine. Husband of one. Daddy of two.

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Reposted by Gabriele Picco
Kevin Monahan @kevinmonahan.bsky.social · 05/02/2026
COLO-REACH UK = the new name for the EOCRC Research Consortium (REsearch in Early Age Colorectal cancer Hub) supporting collaboration between UK clinical academics and patients in research of bowel cancer in people below age 50 years @bowelcanceruk.bsky.social
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Gabriele Picco @gabrielepicco.bsky.social · 28/12/2025
WRN inhibitors are being tested in patients with MSI cancers. How do tumours adapt to WRN inhibition, and can therapy stay ahead of resistance? Our latest preprint investigates how MSI tumours evolve under pressure from WRN inhibition. Highlights below.
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Kevin Monahan @kevinmonahan.bsky.social · 12/11/2025
We had the 3rd meeting of the UK EOCRC Research Consortium in beautiful Edinburgh yesterday supported by British Society of Gastroenterology (BSG) and @bowelcanceruk.bsky.social attended by over 50 UK academics - celebrating our first project funding success only 1 year after foundation
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Alejo Rodriguez-Fraticelli @alejofraticelli.bsky.social · 20/06/2025
Very cool story and especially useful mathematical models for everyone to use! Check it out!!!
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Trevor Graham @trevorgraham.bsky.social · 05/11/2025
New @natgenet.nature.com paper from the brilliant @eszterlakatos.bsky.social presents evidence that chromatin alterations disrupt antigen presentation & neoantigens in colorectal cancer. Also that immune escape is part of the "Big Bang", at the outset of CRC growth. www.nature.com/articles/s41...
nature.com
Epigenetically driven and early immune evasion in colorectal cancer evolution - Nature Genetics
This study nominates immune escape as an early event in colorectal cancer and shows how this can be driven through both genetic and epigenetic changes.
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Gabriele Picco @gabrielepicco.bsky.social · 26/10/2025
Thanks Isabelle. Wonderful experience presenting our work @mgarnett.bsky.social #genomicsatscale25! Thanks for having me!
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Reposted by Gabriele Picco
Inigo Martincorena @imartincorena.bsky.social · 08/10/2025
Our latest work is out in Nature today. In this paper, we introduce an improved version of NanoSeq, a duplex sequencing protocol with <5 errors per billion bp in single DNA molecules, and use it to study the somatic mutation landscape of oral epithelium in >1000 people www.nature.com/articles/s41...
nature.com
Somatic mutation and selection at population scale - Nature
A new version of nanorate DNA&nbsp;sequencing, with an&nbsp;error rate&nbsp;lower than five errors&nbsp;per billion base pairs&nbsp;and compatible with whole-exome and targeted capture, enables epidemiological-scale studies of somatic mutation and selection&nbsp;and&nbsp;the generation of high-resolution&nbsp;selection&nbsp;maps across coding and non-coding sites for many genes.
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ralucagordan.bsky.social @ralucagordan.bsky.social · 03/10/2025
I'm very pleased to announce the official publication of our lab's paper "DNA mutagenesis driven by transcription factor competition with mismatch repair" in today's issue of Cell! www.cell.com/cell/abstrac...
cell.com
DNA mutagenesis driven by transcription factor competition with mismatch repair
Competition between transcription factors and mismatch repair machinery drives localized hypermutation at regulatory elements, with implications for cancer and genome evolution.
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Mathew Garnett @mgarnett.bsky.social · 20/09/2025
The Garnett Lab is excited to launch DepMap Miner, a new tool to explore cancer dependency data! Built on the Sanger DepMap, the DepMap Miner brings together multi-omic and functional datasets for over 1300 cancer cell models. Start mining data now: dataminer.depmap.sanger.ac.uk
depmap miner logo
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Barbara Marte @barbmarte.bsky.social · 11/09/2025
new out in Nature www.nature.com/articles/s41...
nature.com
Fluctuating DNA methylation tracks cancer evolution at clinical scale - Nature
Cancer evolutionary dynamics are quantitatively inferred using a method, EVOFLUx, applied to fluctuating DNA methylation.
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Trevor Graham @trevorgraham.bsky.social · 17/07/2025
Goldschmidt's hopeful monsters in cancer: single cell DNAseq shows whole genome doubling (WGD) is an ongoing and frequent mutational process in ovarian cancer. www.nature.com/articles/s41... beautiful work from @sohrabshah.bsky.social and team
nature.com
Ongoing genome doubling shapes evolvability and immunity in ovarian cancer - Nature
A single-cell sequencing study using more than 30,000 tumour genomes from human ovarian cancers shows that whole-genome doubling is an ongoing mutational process that drives tumour evolution and disru...
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Christian Frezza @frezzalab.bsky.social · 04/07/2025
www.nature.com/articles/s41... Cytidine diphosphate diacylglycerol synthase 2 is a synthetic lethal target in mesenchymal-like cancers
nature.com
Cytidine diphosphate diacylglycerol synthase 2 is a synthetic lethal target in mesenchymal-like cancers - Nature Genetics
The paralogs cytidine diphosphate diacylglycerol synthase 1 and 2 form a potentially targetable synthetic lethal relationship in mesenchymal-like cancers that involves disruption of lipid metabolism.
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Kevin Monahan @kevinmonahan.bsky.social · 10/06/2025
On behalf of InSiGHT, we are delighted to welcome you to the #InSiGHT2026 meeting in Singapore, taking place from 4 – 7 March 2026 #LynchSyndrome #Polyposis @cgaigc.com @stmarksgenomics.bsky.social insight2026.org
insight2026.org
InSIGHT 2026
REGISTRATION NOW OPEN Register NowCall for Abstracts Now Open! Submit Your AbstractWelcome MessageWelcome to Singapore, Selamat Datang, 欢迎, வருக வருக. On behalf of InSIGHT, we are delighted to invite....
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European Research Council (ERC) @erc.europa.eu · 02/06/2025
Planning to apply for #research #funding from the ERC? From the next application rounds, expect changes to the: • proposal structure • evaluation process • extra funding you can request • eligibility for Starting & Consolidator #Grants (from 2027) More 👇 europa.eu/!RPHWvv
europa.eu
Changes to the 2026 and 2027 Work Programmes
With the launch of the competitions for grants under ERC Work Programme 2026 in July of this year, several changes to the submission of applications and the evaluation of proposals will apply. The mai...
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Cansu Dinçer @cansudincer.bsky.social · 22/05/2025
🚨 Excited to share our latest preprint! @mgarnett.bsky.social @mattcoelho.bsky.social We introduce BEstimate, a flexible, comprehensive tool for designing and interpreting CRISPR-based editing experiments. #CRISPR #BEstimate #BaseEditor
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Omer Ali Bayraktar @bayraktarlab.bsky.social · 16/05/2025
How does tumour heterogeneity arise? How can we predict cancer cell plasticity? In 2 new studies, we trace #glioblastoma heterogeneity to a spatial cancer cell trajectory w. multimodal cell atlassing bit.ly/4mkrWgs & predict plasticity w. snRNA/ATAC+deep learning bit.ly/3FbI6Ic 🧵
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Gabriele Picco @gabrielepicco.bsky.social · 30/04/2025
Great to see WRN featured in the #AACR25 Special Session on 'Bringing Science to the Clinic: Overcoming Hurdles for Therapeutic Translation.' Grateful to Tim Yap for highlighting our past and ongoing work!
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Gabriele Picco @gabrielepicco.bsky.social · 28/04/2025
Great talk by Yanhua Rao at #AACR2025 on GSK’s new clinical WRN inhibitor. Proud to see our unpublished data spotlighted for revealing new MoA insights. Exciting times ahead! @mgarnett.bsky.social
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Gabriele Picco @gabrielepicco.bsky.social · 25/04/2025
A fantastic collaboration with Emile Voest’s lab at NKI, the new @mattcoelho.bsky.social group. WG CRISPR screens in MSI organoids co-cultured with autologous reactive T cells! Amazing work from Alex Watterson! New preprint here: www.biorxiv.org/content/10.1... #Organoids #Immunotherapy #CRISPR #MSI
biorxiv.org
CRISPR screens in the context of immune selection identify CHD1 and MAP3K7 as mediators of cancer immunotherapy resistance
Cancer immunotherapy is only effective in a subset of patients, highlighting the need for effective biomarkers and combination therapies. Here we systematically identify genetic determinants of cancer...
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Gabriele Picco @gabrielepicco.bsky.social · 25/04/2025
Just landed in Chicago for #AACR25 — Millennium Park in bloom! Excited for team talks on WRN inhibitors in MSI cancers, with first-in-human data discussed by @mgarnett.bsky.social at the Clinical Trials Plenary. I’ll present new data on WRNi-driven evolution — Poster #420! #MSI #SyntheticLethality
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Kevin Monahan @kevinmonahan.bsky.social · 25/04/2025
Promising early safety and immunogenicity data from the Nous-209 Lynch Syndrome vaccine presented at AACR this month aacrjournals.org/cancerres/ar...
aacrjournals.org
Abstract 6427: Nous-209 off-the-shelf neoantigen immunotherapy induces robust neoantigen T cell response with the potential to intercept cancer in Lynch syndrome carriers
Abstract. Cancer interception represents a new approach, aimed at targeting precancerous lesions and therefore preventing cancer occurrence. Lynch syndrome (LS) is one of the most prevalent hereditary...
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Matt Coelho @mattcoelho.bsky.social · 22/04/2025
Excited to announce our preprint today @biorxivpreprint.bsky.social Using functional genomics, we map the genetic determinants cancer cell sensitivity to tumour-reactive T cells: www.biorxiv.org/content/10.1...
biorxiv.org
CRISPR screens in the context of immune selection identify CHD1 and MAP3K7 as mediators of cancer immunotherapy resistance
Cancer immunotherapy is only effective in a subset of patients, highlighting the need for effective biomarkers and combination therapies. Here we systematically identify genetic determinants of cancer...
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Gabriele Picco @gabrielepicco.bsky.social · 24/03/2025
Quando torno in Italia, mi chiedono spesso: "Di cosa ti occupi adesso?" o "A che punto siamo con la cura del cancro?" Domande semplici, risposte complesse – spesso taglio corto.
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Ultan McDermott @ultanmcd.bsky.social · 06/03/2025
Please forward to any interested scientists - we're looking for a scientist to work in our functional genomics centre to find new cancer targets in Cambridge, UK. A mix of wet lab as well as computational skills a plus. astrazeneca.wd3.myworkdayjobs.com/Careers/job/...
astrazeneca.wd3.myworkdayjobs.com
Senior scientist – functional genomics
Senior scientist – functional genomics Location: Cambridge Salary: Competitive About AstraZeneca AstraZeneca is a global, science-led, and patient-focused biopharmaceutical company that focuses on the...
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Reposted by Gabriele Picco
Elizabeth McKenna @elizsmckenna.bsky.social · 04/03/2025
Now online in Cancer Discovery: Single-Cell eQTL Mapping Reveals Cell Subtype-Specific Genetic Control and Mechanism in Malignant Transformation of Colorectal Cancer - by Can Chen, Yimin Cai, Wenlong Hu, Kai Tan, Zequn Lu, Xuanyu Zhu, Jianbo Tian, Xiaoping Miao & colleagues doi.org/10.1158/2159...
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Chris Lord and Andrew Tutt’s Lab Institute of Cancer Research @icrlordlab.bsky.social · 03/03/2025
Work led by Syed Haider and our team at the @breastcancernow.bsky Toby Robins Research Centre @icr.ac.uk and funded by @cancerresearchuk.org
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Matt Coelho @mattcoelho.bsky.social · 28/02/2025
Today in BJC Reports, we summarise the outcomes from a multidisciplinary workshop focused on addressing cancer drug resistance. www.nature.com/articles/s44...
nature.com
Breaking barriers: we need a multidisciplinary approach to tackle cancer drug resistance - BJC Reports
BJC Reports - Breaking barriers: we need a multidisciplinary approach to tackle cancer drug resistance
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American Association for Cancer Research (AACR) @theaacr.bsky.social · 24/02/2025
Timothy A. Yap, MBBS, PhD, has been appointed editor-in-chief of the AACR journal Clinical Cancer Research. Dr. Yap is co-director for the AACR/ASCO Methods in Clinical Cancer Research Workshop and a past cochair of the AACR Annual Meeting Clinical Trials Committee. www.aacr.org/about-the-aa...
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Mathew Garnett @mgarnett.bsky.social · 25/02/2025
New Gordon Research Conference Alert: Synthetic Lethality Approaches in Oncology. www.grc.org/synthetic-le.... Join us 20-25th July 2025 for an intimate meeting with thought leaders in the field. Great for networking and opportunities for early career scientists to present their research.
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John Prensner @johnprensner.bsky.social · 25/02/2025
Calling attention to this tome. 👀 By reading this paper, you are likely to learn many things, not the least of which is that using "Giga-scale" in your paper title sounds bad-ass. Worked headed by @genophoria.bsky.social & @vevotherapeutics.bsky.social #genomics #bioinformatics 🧪 bit.ly/4bj2fIc
bit.ly
Tahoe-100M: A Giga-Scale Single-Cell Perturbation Atlas for Context-Dependent Gene Function and Cellular Modeling
Building predictive models of the cell requires systematically mapping how perturbations reshape each cell's state, function, and behavior. Here, we present Tahoe-100M, a giga-scale single-cell atlas of 100 million transcriptomic profiles measuring how each of 1,100 small-molecule perturbations impact cells across 50 cancer cell lines. Our high-throughput Mosaic platform, composed of a highly diverse and optimally balanced 'cell village', reduces batch effects and enables parallel profiling of thousands of conditions at single-cell resolution at an unprecedented scale. As the largest single-cell dataset to date, Tahoe-100M enables artificial-intelligence (AI)-driven models to learn context-dependent functions, capturing fundamental principles of gene regulation and network dynamics. Although we leverage cancer models and pharmacological compounds to create this resource, Tahoe-100M is fundamentally designed as a broadly applicable perturbation atlas and supports deeper insights into cell biology across multiple tissues and contexts. By publicly releasing this atlas, we aim to accelerate the creation and development of robust AI frameworks for systems biology, ultimately improving our ability to predict and manipulate cellular behaviors across a wide range of applications. ### Competing Interest Statement Jesse Zhang, Airol A Ubas, Richard de Borja, Valentine Svensson, Nicole Thomas, Neha Thakar, Ian Lai, Aidan Winters, Umair Khan, Matthew G. Jones, Daniele Merico, Nima Alidoust, Hani Goodarzi, Johnny Yu, have received compensation and/or equity from Vevo Therapeutics. Vuong Tran, Joseph Pangallo, Efthymia Papalexi, Ajay Sapre, Hoai Nguyen, Oliver Sanderson, Maria Nigos, Olivia Kaplan, Sarah Schroeder, Bryan Hariadi, Simone Marrujo, Crina Curca Alec Salvino, Guillermo Gallareta Olivares, Ryan Koehler, Gary Geiss, Alexander Rosenberg, Charles Roco, have received compensation and/or equity from Parse Biosciences.
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Gabriele Picco @gabrielepicco.bsky.social · 23/02/2025
www.biorxiv.org/content/10.1...
biorxiv.org
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Kevin Monahan @kevinmonahan.bsky.social · 17/02/2025
Have you had a diagnosis of bowel cancer before age 50 years? We need to hear your views as we develop a comprehensive research programme in the UK, at a meeting in London on 1st April hosted by @bowelcanceruk.bsky.social and @BritSocGastro - please get in touch! #Never2Young #EOCRC
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Slim Mzoughi @sleemmz.bsky.social · 10/02/2025
Thrilled to share my 1st brainchild, out today @naturegenet.bsky.social 🚀 Been hearing a lot about fetal-like states lately? We uncover the molecular mechanisms, functional significance and clinical relevance of #oncofetal reprogramming in CRC. www.nature.com/articles/s41... (rdcu.be/d9iSN) a 🧵
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Gabriele Picco @gabrielepicco.bsky.social · 05/02/2025
www.nature.com/articles/s41...
nature.com
SKI complex loss renders 9p21.3-deleted or MSI-H cancers dependent on PELO - Nature
Analysis of large-scale CRISPR screening data, combined with experiments in patient-derived tumour organoid models, identifies PELO as a potential therapeutic target in chromosomal 9p21.3-deleted canc...
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Maurizio Scaltriti @scaltritilab.bsky.social · 04/02/2025
Non è un caso che il mio libro esca proprio oggi, giornata mondiale contro il cancro. Per affrontare questa malattia c’è solo una via, quella della rigorosa applicazione del metodo scientifico. Nuove terapie e nuove strategie per la diagnosi precoce. Non se, ma quando. bsky.app/profile/scal...
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Gabriele Picco @gabrielepicco.bsky.social · 03/12/2024
What a wonderful occasion to start posting on BlueSky! Thrilled to be speaking at #DDRCT25 in a beautiful location with amazing DNA repair experts. Looking forward to engaging discussions, networking, and connecting with everyone.
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