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Yutong Zhang

@zyt0329.bsky.social
171 followers 244 following 41 posts

Postdoc researcher A chemistry student trying to understand Biology

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Reposted by Yutong Zhang
Cell Biology J-Club @cellclub.bsky.social · 08/10/2026
Golgi-derived vesicles containing PI(3,4)P2 drive mitochondrial fusion | Science www.science.org/doi/10.1126/...
science.org
Golgi-derived vesicles containing PI(3,4)P2 drive mitochondrial fusion
Mitochondria are dynamic organelles that remodel their shape to regulate cell fate. Mitochondrial division involves interactions with the endoplasmic reticulum (ER), lysosomes, and trans-Golgi network...
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Reposted by Yutong Zhang
Nature @nature.com · 05/10/2026
“I think all scientists have a little bit in them,” he says. “That wonder and curiosity about the natural world — not only how it is, but how it could be.” We spoke to 2026 Nobel Prize winner Karl Deisseroth back in 2013, his mark on neuroscience already clear www.nature.com/articles/497...
nature.com
Neuroscience: Method man - Nature
Karl Deisseroth is leaving his mark on brain science one technique at a time.
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Reposted by Yutong Zhang
Virtual ChemBioTalks @chembiotalks.bsky.social · 14/09/2026
The first winner of our Abstract Challenge is Yutong Zhang (Yutong Zhang). She will present a Flash Talk: "DNA nanodevices detect an acidic nanolayer on the lysosomal surface" Make sure to not miss it by registering for free: events.zoom.us/ev/Ag... #ChemBio #ChemSky #Science
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Yutong Zhang @zyt0329.bsky.social · 09/09/2026
Join us!
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Reposted by Yutong Zhang
EMBL @embl.org · 20/07/2026
EMBL and University of Washington researchers have developed NovoTags – AI-designed protein tags – that in future could help researchers combine fluorescence microscopy and cryo-ET, helping identify individual proteins inside cells. @steffenklein.bsky.social More info 👉 www.embl.org/news/science...
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Reposted by Yutong Zhang
Nature Structural & Molecular Biology @natsmb.nature.com · 16/06/2026
New online: A single-vesicle fluorescence microscopy platform to quantify phospholipid scrambling
dlvr.it
A single-vesicle fluorescence microscopy platform to quantify phospholipid scrambling
Nature Structural & Molecular Biology, Published online: 15 June 2026; doi:10.1038/s41594-026-01821-8Veit et al. present a fluorescence microscopy platform to measure protein scramblase-mediated lipid flipflop across membranes by imaging single vesicles containing fluorescent lipid probes to quantify precise transport rates.
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Reposted by Yutong Zhang
Nature @nature.com · 12/06/2026
Nature research paper: Mitochondria directly interact with the nuclear pore complex go.nature.com/4xoZS0M
go.nature.com
Mitochondria directly interact with the nuclear pore complex - Nature
Mitochondria interact directly with the nuclear pore complex via VDAC1–RANBP2 binding to sustain nuclear ATP levels.
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Reposted by Yutong Zhang
RCSB Protein Data Bank @rcsbpdb.bsky.social · 31/05/2026
Researchers pioneer method to rapidly design proteins Their strategy revealed new details that open the door to designing proteins with powerful abilities that could ultimately benefit medicine and manufacturing.
www6.slac.stanford.edu
Researchers pioneer method to rapidly design proteins
Their strategy revealed new details that open the door to designing proteins with powerful abilities that could ultimately benefit medicine and manufacturing.
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Reposted by Yutong Zhang
DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 29/04/2026
I am so grateful for this honor - grateful to my mentors, lab, and family. Thank you @seanjmorrison.bsky.social for your support. And how great to be elected with some very good friends and two awesome UTSW colleagues, Elizabeth Chen and Joel Elmquist. Feeling very fortunate today.
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Reposted by Yutong Zhang
HHMI @hhmi-science.bsky.social · 28/04/2026
What's better than one #HHMIInvestigator being elected to the @nasonline.org? Ten! Meet the newest members, recognized by their peers for distinguished, ongoing contributions to original research: bit.ly/4cCxRuv.
10 HHMI Investigators elected to the National Academy of Sciences:

- Jesse Bloom, Fred Hutchinson Cancer Center
- Clifford P. Brangwynne, Princeton University
- Ralph J. DeBerardinis, UT Southwestern Medical Center
- Chuan He, The University of Chicago
- Stephen Liberles, Harvard Medical School
- Vanessa Ruta, The Rockefeller University
- Pardis C. Sabeti, Harvard University
- Russell E. Vance, University of California, Berkeley
- Johannes Walter, Harvard Medical School
- Yi Zhang, Boston Children’s Hospital
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Reposted by Yutong Zhang
MRC Laboratory of Molecular Biology @mrclmb.ac.uk · 16/04/2026
The LMB Rising Talent Fellowship is open for new applicants! Aimed at Black heritage scientists, the Fellowship offers a 3-year postdoctoral position beginning Oct-Dec 2026. Visit our website for more info: mrclmb.ac.uk/careers-and-... Please circulate this post to anyone who might be interested!
Announcement for a three-year Rising Talent Fellowship for Black heritage postdoctoral scientists at MRC Laboratory of Molecular Biology.
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Yutong Zhang @zyt0329.bsky.social · 08/04/2026
great!
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Reposted by Yutong Zhang
Nature Reviews Molecular Cell Biology @natrevmcb.nature.com · 22/03/2026
ICYMI: New Online! Technologies to measure and modulate protein subcellular localization
dlvr.it
Technologies to measure and modulate protein subcellular localization
Nature Reviews Molecular Cell Biology, Published online: 19 March 2026; doi:10.1038/s41580-026-00957-1Subcellular localization is important for protein function. This Review discusses advances in spatial subcellular proteomics, assesses the strengths and weaknesses of technologies that measure and control protein localization, and considers their potential uses in cell biology and medicine.
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Reposted by Yutong Zhang
Stella Hurtley @smhsci.bsky.social · 11/03/2026
Join Matthew Vander Heiden (MIT), Sarah-Maria Fendt (VIB), Ralph J. DeBerardinis (UTSW), and me (Deputy Editor @science.org) online Wed March 18 to hear about the influence of metabolism on cancer progression. Free registration below. lifesciences.westlake.edu.cn/media/events...
lifesciences.westlake.edu.cn
Rethinking Cancer Metabolism - Westlake x Science\/AAAS Joint Online Symposium #01 (2026)
Altered metabolism is a hallmark of cancer: malignant cells re-engineer nutrient acquisition and utilization to fuel unchecked growth and survival. Beyond functioning as a simple energy powerhouse, metabolic rewiring reshapes virtually every layer of cell regulation, from chromatin architecture a...
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Yutong Zhang @zyt0329.bsky.social · 01/03/2026
Coooool!
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Reposted by Yutong Zhang
Nature Chemical Biology @natchembio.nature.com · 27/02/2026
Mast cell extracellular granules are found to be condensates formed through sugar-metabolite interactions with elevated pH and higher metal concentration that enrich and enhance the activity of immune modulators, such as cytokines and proteases www.nature.com/articles/s41...
nature.com
Mast cell extracellular granules are bioactive condensates assembled by heparin and polyamine - Nature Chemical Biology
Mast cells are immune cells that release membraneless mast cell extracellular granules (MCEGs) in response to allergic inflammation and pathogen infection. MCEGs are found to be condensates formed thr...
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Reposted by Yutong Zhang
Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 18/02/2026
Congratulations to new Sloan Fellow @grant.rotskoff.cc @stanfordchemistry.bsky.social !! sloan.org/fellowships/...
sloan.org
2026 Fellows | Alfred P. Sloan Foundation
Our mission is to make the world a better place through the advancement of scientific knowledge.
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Yutong Zhang @zyt0329.bsky.social · 17/02/2026
Happy Chinese New Year!🐴 A horse year 2026!
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Yutong Zhang @zyt0329.bsky.social · 14/02/2026
Nice cover!Happy Valentine’s Day😃
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Yutong Zhang @zyt0329.bsky.social · 13/02/2026
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Yutong Zhang @zyt0329.bsky.social · 13/02/2026
Excellent work!
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Reposted by Yutong Zhang
MRC Laboratory of Molecular Biology @mrclmb.ac.uk · 13/02/2026
How did life arise from simple chemical building blocks? New #LMBResearch led by @edogia.bsky.social in @philholliger.bsky.social group has identified a small self-replicating ribozyme that could be the answer. Read more: mrclmb.ac.uk/news-events/...
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Yutong Zhang @zyt0329.bsky.social · 26/01/2026
Thank you for highlighting our work with very visionary perspectives! @mstagi.bsky.social @natcellbio.nature.com Decoding the proton veil around lysosomes www.nature.com/articles/s41...
nature.com
Decoding the proton veil around lysosomes - Nature Cell Biology
A newly discovered acidic nanolayer that envelopes lysosomes reveals that proton gradients extend beyond the organelle lumen, identifying a nanoscale regulatory interface that links luminal pH, TMEM17...
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Yutong Zhang @zyt0329.bsky.social · 26/01/2026
😀
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Reposted by Yutong Zhang
Cell Biology J-Club @cellclub.bsky.social · 21/01/2026
www.nature.com/articles/s41...
nature.com
DNA nanodevices detect an acidic nanolayer on the lysosomal surface - Nature Cell Biology
Tan and colleagues develop DNA nanodevices to detect the pH of the lysosomal outer surface, observing an acidic layer generated by TMEM175 that regulates lysosome positioning in response to changes in...
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Reposted by Yutong Zhang
RSC Chemical Biology @rscchembio.rsc.org · 09/01/2026
📢 #RSCChemBio is sponsoring two poster prizes at the EMBO-EMBL Chemical Biology Workshop 2026! 📅 8 - 11th September 2026 📍 EMBL Heidelberg, Germany 🔗 www.embl.org/about/i... Submit your abstract by 2nd June 2026 to a part of the event! EMBO #ChemicalBiology
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Yutong Zhang @zyt0329.bsky.social · 22/01/2026
Thanks!!😍😁☺️ Great tools!
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
Most importantly, the key is to figure out the downstream biosensor. By lyso-IP experiments that is to isolate lysosome in acidic buffer and neutral buffer, we found that RILP is recruited more under acidic pH buffer! We also figure out the potential site, by a seires of biochemistry experiments.
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
Lysosome mobility is considered to be luminal-pH related. However, we all know that, dynein and adaptor and proteins are assembled on the surface, therefore I guess, it is juxta-lysosome pH regulates lysosome pH. By experiments, we verified, yes, it is.
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
We also change the location of proton-sensitive dye on this DNA duplex, to change its distance from the lysosomal surface. We measure that how long it will take to reach the same pH with cytosol? To our surprise, this acidic juxta-lysosome pH has a thickness!!
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
We then explored that, TMEM175, a proton-efflux channel, maintained this aicidic juxta-lysosome pH. Knocking out TM175 increase it and verse vise. Stimulating TM175 will decrease juxta-lysosome pH, which is negligable in TM175-KO cells.
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
Then, by conjugating proton-based ratiometric small molecules on the DNA duplex, we measured that, the surface pH of lysosomes is lower than neutral cytosol! We named it juxta-lysosome pH. It is 0.2-0.7 pH unit lower than cytosol.
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
First step, we establish a platform technology via DNA nanotechnology on the lysosome surface.
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
@carolynbertozzi.bskyverified.social acidic nanolayer is finally out! thank you for enlightening me in Shanghai last summer!
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
Beyond thrilled to share my PhD work out today in @natcellbio.nature.com , uncovering a nanoscale acidic environment around lysosomes that controls their mobility through proton signaling.🥳🥳🥳 Great thanks to my advisors and excellent peers for helping me! www.nature.com/articles/s41...
nature.com
DNA nanodevices detect an acidic nanolayer on the lysosomal surface - Nature Cell Biology
Tan and colleagues develop DNA nanodevices to detect the pH of the lysosomal outer surface, observing an acidic layer generated by TMEM175 that regulates lysosome positioning in response to changes in...
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Yutong Zhang @zyt0329.bsky.social · 02/01/2026
Congrats to my advisor Weihong and team! doi.org/10.1126/scie...
doi.org
SPARK-seq: A high-throughput platform for aptamer discovery and kinetic profiling
Cell surface proteins are key disease biomarkers and therapeutic targets, yet high-throughput methods for aptamer discovery targeting these proteins in situ remain limited. We introduce single-cell pe...
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Yutong Zhang @zyt0329.bsky.social · 30/12/2025
Cheers!Finally get my doctoral diploma and become Dr.Zhang🥳🥳 Look forward!
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Yutong Zhang @zyt0329.bsky.social · 19/12/2025
That is interesting!Proton is magic-The most fundamental but important ion. I really like it🤩🤩🤩
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Yutong Zhang @zyt0329.bsky.social · 19/12/2025
I have another question that I'm curious very much. What do you think of the biology function of these pH gradient inside organelles compared to the uniform distributed pH we considered in the past?
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Yutong Zhang @zyt0329.bsky.social · 19/12/2025
excellent depict of organelle pH! Proton signaling is promising.
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Reposted by Yutong Zhang
Nature Reviews Bioengineering @natrevbioeng.nature.com · 19/10/2025
ICYMI: Molecular bioengineering of functional nucleic acids
nature.com
Molecular bioengineering of functional nucleic acids
Nature Reviews Bioengineering, Published online: 17 October 2025; doi:10.1038/s44222-025-00361-yFunctional nucleic acids (FNAs) achieve specific target recognition, molecular binding and catalytic activity by folding into defined secondary and tertiary structures. This Review focuses on two major classes of FNAs — aptamers and DNAzymes — and discusses their structural features, production strategies and engineering approaches as well as their clinical applications in diagnostics, targeted therapy and precision medicine.
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Yutong Zhang @zyt0329.bsky.social · 15/10/2025
First time to make an offline flash talk to present my PhD work🤩🤓 Really good opportunity😍
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Yutong Zhang @zyt0329.bsky.social · 12/10/2025
Glad to share my work and to receive first prize award of poster !🤩🤩🤩
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Reposted by Yutong Zhang
Nature @nature.com · 08/10/2025
These intriguing materials - the world's most porous sponges - won today's Nobel Prize in Chemistry go.nature.com/3VVjXug
go.nature.com
World’s most porous sponges: intricate carbon-trapping powders hit the market
Metal-organic frameworks were the next big thing in chemistry when they were invented more than three decades ago. Now, these intriguing materials are becoming commercial tools for capturing carbon dioxide and harvesting water from the air.
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Reposted by Yutong Zhang
Nature @nature.com · 05/10/2025
Being named as a Nobel laureate is the ultimate prize for many scientists, but how do other science prizes compare? go.nature.com/4nvVk3p
go.nature.com
These science prizes want to rival the Nobels: how do they compare?
Nature - Being named as a Nobel laureate is the ultimate prize for many scientists, but how do other science prizes compare?
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Yutong Zhang @zyt0329.bsky.social · 02/10/2025
Congrats to Yuting and Prof.Qiu! I'm glad to participate in this nice work as well🤩
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Yutong Zhang @zyt0329.bsky.social · 02/10/2025
Congrats to Yuting and Prof.Qiu! I'm glad to participate in this nice work as well🤩
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Reposted by Yutong Zhang
Peking University @pku1898.bsky.social · 30/08/2025
2022 Nobel Prize winner in Chemistry, #Stanford Prof. Carolyn Bertozzi, delivered an inspiring lecture on #BioorthogonalChemistry at #PekingUniversity on Aug. 28. @stanford.edu @carolynbertozzi.bskyverified.social
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Yutong Zhang @zyt0329.bsky.social · 26/08/2025
Have same lysosome slide with @carolynbertozzi.bskyverified.social happy to chat with you my work as a chemistry student doing cell biology🤩🤩🤩
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Yutong Zhang @zyt0329.bsky.social · 22/08/2025
Very nice🤩🤩🤩🤩🤩
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