Reposted by Karrera DjokoStrep GBI, 1-2 April 2027 in Durham @strepgbi.bsky.social · 12/01/2026Strep GBI 2026 is open. Join ECRs and experts to highlight cutting-edge research focused on crucial aspects of Streptococcal biology. Registration/abstracts 👉 pay.durham.ac.uk/event-durham... ⏳ Deadline Feb 13 📌 Durham 🗓️ March 30/31 2026. 🌐 strepgbi.wixsite.com/strep-gbi. 023
Karrera Djoko @thecopperdoctor.bsky.social · 24/01/2026Lots of PhD opportunities for UK + international students involving my lab. Topics relate to metals & microbiology. First up: TonB-dependent receptors in commensal Neisseria in my lab at Durham, with @kjosts.bsky.social and @mattbashton.bsky.social. www.findaphd.com/phds/project...findaphd.comNutrient uptake in commensal bacteria: exploring uncharacterised TonB-dependent transporters. at Newcastle University on FindAPhD.comPhD Project - Nutrient uptake in commensal bacteria: exploring uncharacterised TonB-dependent transporters. at Newcastle University, listed on FindAPhD.com 12322
Karrera Djoko @thecopperdoctor.bsky.social · 21/09/2025Already missing heather season in the UK 😭 0110
Karrera Djoko @thecopperdoctor.bsky.social · 22/08/2025Summer, please never leave. Mostly so that all my weekend walks look like this (pics from Swaledale) but also because I still have so much to do before the new academic year starts lolsob. 050
Karrera Djoko @thecopperdoctor.bsky.social · 11/05/2025Petition for England to look like this every weekend. 2180
Reposted by Karrera DjokoVaughn Cooper @vscooper.micropopbio.org · 12/12/2024I’m proud to join more than 30 colleagues today in sharing our analysis of potential risks from “mirror life”. We summarize our findings in a @science.org article, and in greater detail in a 300pg technical report: Article: www.science.org/doi/10.1126/... Report: purl.stanford.edu/cv716pj4036 40755210
Reposted by Karrera DjokoTimothée Poisot @ctrlalttim.com · 10/12/2024Our time is monetized but not valuable 2223
Reposted by Karrera DjokoJeremy Berg @jeremymberg.bsky.social · 10/12/2024Bluetorial: What’s the worst that can happen? Meeting a scientific hero (Lots of chemical history today)media.tenor.coma cartoon says hey everybody an old man 's talking while bart simpson looks onALT: a cartoon says hey everybody an old man 's talking while bart simpson looks on 49532
Karrera Djoko @thecopperdoctor.bsky.social · 10/12/2024If I have to sit through another meeting where students are referred to as "our target market", I might actually scream out loud instead of internally. 240
Reposted by Karrera DjokoKarrera Djoko @thecopperdoctor.bsky.social · 13/11/2024Ok, I figured out how to create a Metallobiologists starter pack. I'll keep adding to the list as I find more, but please add your name here if I've missed you. go.bsky.app/SgEyRLv 143319
Reposted by Karrera DjokoMike Feigin 🥯 @mikefeigin.bsky.social · 06/12/2024My guess is that this post is a joke to 50% of scientists and serious to the other 50%. 1210413
Reposted by Karrera DjokoAngelo Frei @angelofrei.bsky.social · 06/12/2024Only 1 week left to apply for this competition-funded position in my group! 024
Reposted by Karrera DjokoDavid K Smith @professor-dave.bsky.social · 03/12/2024Good explanation of recent changes for efficiency: No more academic boards of studies, each module can only have one summative assessment, modules with <10 students cancelled, removal of all double-blind marking. www.yorkvision.co.uk/news/assessm...yorkvision.co.ukAssessments Cut as University ‘Changes the Work’ | York VisionThe University is set to impose wide-ranging changes to modules, assessment and departmental structures in a bid to save money. 7176
Reposted by Karrera DjokoDaumann Lab @daumannl.bsky.social · 03/12/2024#ChemSky This Preprint by @sophieguti.bsky.social has got it all: Natural Product synthesis, Chelators, Ln, Curium luminescence, mass spec methods, bacteria! doi.org/10.26434/che... Comparative Binding Studies of the Chelators Methylolanthanin and Rhodopetrobactin B to Lanthanides and Ferric Iron.🧪🧵 13811
Reposted by Karrera DjokoKevin Waldron @waldronlab.bsky.social · 03/12/2024I have a PhD position available in my group, to start in March 2025. If you have a keen interest in biochemistry and would like to study an exciting and novel class of copper proteins (aka weird Cu tubes) from bacteria, I'd love to hear from you. You should apply here: ibb.edu.pl/app/uploads/... 22524
Reposted by Karrera DjokoGavin Thomas (he/him) @gavinhthomas.bsky.social · 03/12/2024Another preprint, and this time the excellent work of @imrsankhan.bsky.social from his PhD & our first full experimental Staph aureus paper - on transporters of course! Imran found a cool link to glutathione and infection too. www.biorxiv.org/content/10.1...biorxiv.orgDistinct roles for the Staphylococcus aureus POT transporter DtpT in di/tripeptide uptake and glutathione utilisation inside human macrophagesPeptides available in biological niches inhabited by the human pathogen Staphylococcus aureus serve as a rich source of amino acids required for growth and successful host colonisation. Uptake of pept... 1157
Karrera Djoko @thecopperdoctor.bsky.social · 02/12/2024Reposting this for new arrivals. PS: this isn't an exclusive PI-only list! If you are student, postdoc, or tech working on metals in biology, and I have missed you, please let me know. ☺️ 010
Reposted by Karrera DjokoJennifer Goff, PhD @jlgoff.bsky.social · 02/12/2024Final call for early abstracts is tomorrow! 074
Reposted by Karrera DjokoProf Cynthia Whitchurch FAA🏳️🌈 @cwhitch.bsky.social · 02/12/2024I'm recruiting! I'm looking for a motivated postdoctoral scientist to join my new team at SCELSE in Singapore. The role will explore various aspects of how #eDNA is produced and utilised in #Pseudomonas aeruginosa biofilms. #Microsky #phagesky #Science ntu.wd3.myworkdayjobs.com/Careers/job/...ntu.wd3.myworkdayjobs.comResearch Fellow (eDNA in Biofilms)The Singapore Centre for Environmental Life Sciences Engineering (SCELSE) is a unique interdisciplinary Research Centre of Excellence (RCE), funded by National Research Foundation, Ministry of Educati... 35050
Reposted by Karrera DjokoAnimalcules @bacteriophile.bsky.social · 02/12/2024A widespread family of ribosomal peptide metallophores involved in bacterial adaptation to metal stress | PNAS www.pnas.org/doi/10.1073/...pnas.org 033
Karrera Djoko @thecopperdoctor.bsky.social · 01/12/2024The Lake District in late autumn never disappoints. 2581
Karrera Djoko @thecopperdoctor.bsky.social · 29/11/2024In other news, I discovered last night that the big Tesco in Durham now sells Tim Tams. I may/may not have bought so many that may/may not have prompted the person at the register to comment, "Wow, you must really like Tim Tams." 2140
Reposted by Karrera DjokoFreya Harrison @friendlymicrobe.bsky.social · 26/11/2024Does anyone know of small grants schemes that a PhD student could apply to in order to cover sequencing costs? Looking for ~£4k. #MicroSky 544
Reposted by Karrera DjokoHenrik Strahl @henrikstrahl.bsky.social · 26/11/2024www.findaphd.com/phds/project... #microskyfindaphd.comMRC DiMeN Doctoral Training Partnership: Metabolic barcoding of microbial antibiotic exposomes at Newcastle University on FindAPhD.comPhD Project - MRC DiMeN Doctoral Training Partnership: Metabolic barcoding of microbial antibiotic exposomes at Newcastle University, listed on FindAPhD.com 054
Reposted by Karrera DjokoDr Katherine Duncan @kateduncan.bsky.social · 26/11/2024The Natural Products Atlas 3.0: extending the database of microbially derived natural products - thanks to the Linington lab for letting the Duncan lab be part of the curation efforts academic.oup.com/nar/advance-... #NaturalProducts #SpecializedMetabolites #microsky #microbialchemistryacademic.oup.comThe Natural Products Atlas 3.0: extending the database of microbially derived natural productsAbstract. The Natural Products Atlas is a database of microbially derived natural products that contains structures, producing organism taxonomy, biosynthe 08035
Reposted by Karrera DjokoUrszula McClurg @urszulamcclurg.bsky.social · 26/11/2024I am delighted to announce a tailored PhD scheme supporting candidates from minority backgrounds. This scheme is fully funded, passport blind and comes with tailored mentoring www.findaphd.com/phds/program.... Come join us at @livuni-ismib.bsky.social!findaphd.comFindAPhD : Fully funded studentship at the Institute of Systems, Molecular and Integrative Biology at University of LiverpoolApply for a PhD: Fully funded studentship at the Institute of Systems, Molecular and Integrative Biology at University of Liverpool 11214
Reposted by Karrera DjokoMelanie Blokesch @mblokesch.bsky.social · 25/11/2024Exciting times! Our latest preprint is now live 🤩! After nearly 16 yrs of running my lab, I truly believe this is one of the most significant contributions we've made. It offers fresh hypotheses about how pandemic Vibrio cholerae spreads globally. Let’s dive in!🧵..1/n www.biorxiv.org/content/10.1...biorxiv.orgDiverse phage defence systems define West African South American pandemic Vibrio choleraeOur understanding of the factors underlying the evolutionary success of different lineages of pandemic Vibrio cholerae remains incomplete. Interestingly, two unique genetic signatures define the West ... 4236112
Karrera Djoko @thecopperdoctor.bsky.social · 26/11/2024Re-bluesky-ing this? Re-posting? What's the word? 😅 297
Reposted by Karrera DjokoAlexis Verger 🧬🧫🧪 @alexis-verger.cpesr.fr · 25/11/2024Look who's here @pnas.org ✔️ @science.org ✔️ @naturecellbiology.bsky.social ✔️ @natrevgenet.bsky.social ✔️ @naturebiotech.bsky.social ✔️ @naturemicrobiol.bsky.social ✔️ @naturechemistry.bsky.social ✔️ @genesdev.bsky.social ✔️ @cellchembiol.bsky.social ✔️ @genomeresearch.bsky.social ✔️ @jcellbiol.bsky.social ✔️ 34503237
Reposted by Karrera DjokoBejaLabTechnion @bejalab.bsky.social · 25/11/2024The Parkinson’s disease drug entacapone disrupts gut microbiome homoeostasis via iron sequestration www.nature.com/articles/s41... 012
Reposted by Karrera DjokoBen Neely @benneely.com · 24/11/2024I took biochem in 2001, and for nearly 20 years read amino acid sequences daily… and I never knew Dayhoff named them or even the logic behind things like Q until last Friday (h/t Mike Janech). Also, this is another big Dayhoff moment for me. She was incredible! #proteomics #bioinformaticsbiology.arizona.eduDr. Margaret Oakley Dayhoff 1419979
Reposted by Karrera DjokoSophien Kamoun @kamounlab.bsky.social · 24/11/2024ChatGPT and similar LLM systems will help you save time here when used judiciously 👇 15220
Reposted by Karrera DjokoᐯIᑕTOᖇ ᑎIᘔET, ᗰᗪ @nizet.bsky.social · 22/11/2024Crazy stuff in PNAS dental plaque bacterium 𝘊𝘰𝘳𝘺𝘯𝘦𝘣𝘢𝘤𝘵𝘦𝘳𝘪𝘶𝘮 𝘮𝘢𝘵𝘳𝘶𝘤𝘩𝘰𝘵𝘪𝘪 can divide into an unprecedented 14 daughter cells at once—then each daughter cell starts growing immediately in a rare process called multiple fission, achieving 0.5 mm per day of expansion www.snexplores.org/article/bact...snexplores.orgThese mouth bacteria use a new type of cell division to make 14 cells at onceThe newfound strategy seen in C. matruchotii might help oral bacteria recover lost territory after each eviction by toothbrushing. 17345114
Reposted by Karrera DjokoProteases and Innate immunity lab @ York @protinnimmunity.bsky.social · 22/11/2024PhD project with Ioannis Kourtzelis, our lab and Mesenbio in lovely York! Macrophage, EV and innate immune responses, what's not to love! www.findaphd.com/phds/project...findaphd.comCASE Project: Unravelling the role of extracellular vesicles in the orchestration of macrophage – mediated immune regulation. at University of York on FindAPhD.comPhD Project - CASE Project: Unravelling the role of extracellular vesicles in the orchestration of macrophage – mediated immune regulation. at University of York, listed on FindAPhD.com 056
Karrera Djoko @thecopperdoctor.bsky.social · 22/11/2024Took the group out for afternoon coffee to celebrate paper acceptance, new members, returning member, and end of a successful UG project. Definitely the best parts of my job. 0100
Karrera Djoko @thecopperdoctor.bsky.social · 21/11/2024We have a fully-funded PhD position to develop and test a mathematical model that can explain how metal ions influence microbial coexistence. Will suit candidates with a natural sciences, maths, ecology, or microbiology background who can imagine themselves doing some wet lab and some modelling.findaphd.comPopulation-scale impacts of metals on microbial communities at Durham University on FindAPhD.comPhD Project - Population-scale impacts of metals on microbial communities at Durham University, listed on FindAPhD.com 187
Reposted by Karrera DjokoLucy Crouch @lucyicm.bsky.social · 21/11/2024We also have a industry-linked PhD position on Bacteroides and host glycans that will be advertised soon #glycotime🍭 The IMI is an amazing environment with lovely PIs doing loads of cool science, so please apply if you see a project you're interested in 🥼🧪 035
Reposted by Karrera DjokoMatthew Freeman @mjafreeman.bsky.social · 19/11/2024Here’s my spreadsheet of starter packs (>80!) related to broadly ‘mechanistic biology’ plus some intriguing extras Complete with collective nouns I’ve been tracking these but now can’t keep up Hope it’s helpful 2/2 docs.google.com/spreadsheets...docs.google.com@mjafreeman.bsky.social's BlueSky starter packs for 'mechanistic' biologists 39204123
Reposted by Karrera DjokoÁkos T Kovács @evolvedbiofilm.bsky.social · 19/11/2024Bacillus on the Blue place, starting small, but hopefully extending to keep the conversation active [it was also gorwing slow on Twitter] go.bsky.app/BfusVyD 63218
Reposted by Karrera DjokoAlasdair Hubbard @dralhubb.bsky.social · 19/11/2024PhD studentship available. The project is VERY interdisciplinary, combing social science, biophysics and microbiology to understand inequalities of UTIs treatment and replicate them in vitro to help choose the correct antibiotic. Pls share, home students only #AMR #MicroSky tinyurl.com/45d8h54utinyurl.comHealth inequalities which impact the treatment of urinary tract infectionsFind out about this studentship opportunity on Health inequalities which impact the treatment of urinary tract infections. 33223
Karrera Djoko @thecopperdoctor.bsky.social · 18/11/2024We have a fully-funded PhD position to develop & test a mathematical model to explain how metal ions influence microbial coexistence. Would suit candidates with Maths, Bio, or Nat Sci background. Great project & training. Our project undergrads this year are currently writing a paper already! 12322
Reposted by Karrera DjokoJessica Blair @jessicamablair.bsky.social · 15/11/2024PhD studentship alert!! Two projects available with me fully funded by BBSRC This one is a collaboration with Dr Michelle Buckner warwick.ac.uk/fac/cross_fa... And this one a collaboration with @overtonlab.bsky.social warwick.ac.uk/fac/cross_fa... Both will be lots of fun! Come & join us 😃warwick.ac.ukProfessor Jessica BlairProfessor Jessica Blair 210265
Reposted by Karrera DjokoDr Katherine Duncan @kateduncan.bsky.social · 14/11/2024The starter pack I made is at the 50/50 limit - I’ve heard many packs were expanded automatically to 150 people, any suggestions on how to make this happen? go.bsky.app/72NeGsT 2128
Reposted by Karrera DjokoSusanne Gebhard @gebhardlab.bsky.social · 13/11/2024New preprint from the team, looking at the links between carbon metabolism, calcium detoxificatin and bacterial biomineralisation! As always a fun collaboration with Kevin Paine and many other wonderful people. www.biorxiv.org/content/10.1...biorxiv.orgMetabolic insights into microbially induced calcite formation by Bacillaceae for application in bio-based construction materialsMicrobially induced calcite precipitation (MICP) offers promising solutions for sustainable, low-cement infrastructure materials. While it is known how urea catabolism leads to biomineralization, the ... 154