iiinova — where your digital self keeps evolving

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spaXio - MSCA doctoral network @spaxio.bsky.social · 08/02/2026

We are still seeking the right candidates for Projects 12 and 13, and have therefore reopened the application process. We are looking for two motivated bioinformaticians eager to help unravel metastatic processes in colon and breast cancer. Details: www.spaXio.eu/news Deadline: 18 February 2026

spaxio.eu

spaXio - MSCA doctoral network - News

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Nik Fortelny @nikfortelny.bsky.social · 17/01/2026

Open positions for 11 scientists! Our newly funded consortium "EpiFlaMe" is looking for 7 PhD students, 2 bioinformaticians (postdoc and technician), and 2 wet lab technicians. Interested? Submit your application until Feb 13, 2026 via www.plus.ac.at/epiflame

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Fabian Theis @fabiantheis.bsky.social · 04/11/2025

🚀 Prophet v3 is out! AI that predicts how cells respond to genetic & chemical perturbations across readouts. Now scales to 1.9 M molecules + in vitro validation of melanoma-specific hits 🧬💊 📄 biorxiv.org/content/10.1... #AI #Biology #DeepLearning

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spaXio - MSCA doctoral network @spaxio.bsky.social · 04/11/2025

Less than a week left to apply! Join the spaXio Doctoral Network, where we’re decoding the biology of metastasis through spatial omics, organoid models, and computational biology. Don’t miss your chance to be part of this cutting-edge research community. Apply now: www.spaXio.eu

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Adrian Liston @labliston.bsky.social · 28/10/2025

Pre-print alert! And this one really is a must read for anyone that does spectral #flowcytometry. It is a complete, fully-automated spectral unmixing pipeline that reduces error up to 9000-fold. Want to get a tough sample, like lung, looking like this? Read more! www.biorxiv.org/content/10.1...

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spaXio - MSCA doctoral network @spaxio.bsky.social · 17/10/2025

Join spaXio, an EU-funded MSCA Doctoral Network exploring how cancer spreads & interacts with its surroundings using spatial multi-omics, 3D tumoroids, advanced imaging & AI. 🎓 14 fully funded PhD positions across Europe! 🌐 www.spaXio.eu 📝 Apply: civis.smapply.io/prog/spaxio_...

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Jeremias Lab @jeremiaslab.bsky.social · 29/09/2025

🚨 New preprint alert! 🚨 We just posted our latest manuscript on patient-derived xenograft (PDX) models in acute myeloid leukemia (AML): 📝 "A platform of robust patient-derived leukemia models covering subgroups for which no cell lines exist" www.biorxiv.org/content/10.1... Why this matters ⬇️

biorxiv.org

A platform of robust patient-derived leukemia models covering subgroups for which no cell lines exist

Preclinical cancer research requires robust model systems, especially for poor prognosis entities like acute myeloid leukemia (AML), a highly aggressive blood cancer. Here, primary tumor cells from 13...

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Isabela Corina Fortunato, PhD @icfortunato.bsky.social · 27/09/2025

Happy to share that my PhD has finally taken the shape of a paper! ✨ Huge thanks to all authors, especially @davidbrueckner.bsky.social & @ehannezo.bsky.social for leading the modeling and @raimonsunyer.bsky.social & @xaviertrepat.bsky.social for their invaluable supervision. 🧵👇

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Fabian Theis @fabiantheis.bsky.social · 28/09/2025

🚀 Excited to share scPortrait! Led by Sophia Mädler & Niklas Schmacke w/ the Mann lab — a new @scverse tool for standardized single-cell image data. Enables ML-ready extraction, >1B cell processing, cross-omics, & cancer macrophage insights. 🔗 www.biorxiv.org/content/10.1...

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Hans Clevers @hansclevers.bsky.social · 06/09/2025

1/11 In @science.org: A new perspective on how our intestines renew. Cells are not “pushed out” by crowding or die from apoptosis. Instead, cells play a mechanical tug-of-war, where weaker cells extrude, reframing gut renewal as force-regulated. www.science.org/doi/10.1126/...

science.org

Epithelial tension controls intestinal cell extrusion

Cell extrusion is essential for homeostatic self-renewal of the intestinal epithelium. Extrusion is thought to be triggered by crowding-induced compression of cells at the intestinal villus tip. In th...

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Martin Pacesa @martinpacesa.bsky.social · 27/08/2025

Exciting to see our protein binder design pipeline BindCraft published in its final form in @Nature ! This has been an amazing collaborative effort with Lennart, Christian, @sokrypton.org, Bruno and many other amazing lab members and collaborators. www.nature.com/articles/s41...

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spaXio - MSCA doctoral network @spaxio.bsky.social · 12/07/2025

spaXio members were proud to take part in the Summer School "Immuno-Oncology in the Spatial Omics Era", hosted by the Institut Cancer et Immunologie (ICI) Marseille and CIVIS. It was a fantastic week filled with cutting-edge scientific talks, hands-on workshops, and inspiring student presentations.

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spaXio - MSCA doctoral network @spaxio.bsky.social · 30/04/2025

Big news from Uni Salzburg! The Xenium spatial transcriptomics platform is up and running. Supported by FFG-backed CellComm initiative, Centre for Tumour Biology and Immunology and Dept of Biosciences and Med.Biology, this tech brings next-level spatial resolution to our cancer research efforts!

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Peter Krenn @petkrenn.bsky.social · 02/04/2025

What a day! First our granted MSCA doctoral network spaXio @spaxio.bsky.social, now my first last authorship! Perfect timing as we will need to do some serious organoid manipulations to achieve our spaXio goals! Check out our protocol: pubmed.ncbi.nlm.nih.gov/40163310

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Spencer S Watson @drspencerwatson.bsky.social · 02/04/2025

Thrilled to announce our doctoral network for spatial oncology as been funded by Marie Skłodowska-Curie Actions! This combines some of the best immuno-oncology and computational labs across Europe to create a multi-disciplinary PhD program for spatial-omics cancer research. More details soon!

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