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Fumiaki Obata

@obataf-lab.bsky.social
114 followers 89 following 19 posts

PI studying nutritional biology at RIKEN Center for Biosystems Dynamics Research & visiting associate professor in Kyoto University. Interested in Drosophila genetics, amino acid, nutrient, microbiota, metabolism, ageing, lifespan, and many others

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Reposted by Fumiaki Obata
Zongzhao Zhai @immuno-physiology.bsky.social · 25/09/2026
Excited to share our work reporting that fly Lsp2 acts as a nutrient-induced physiological factor that amplifies mTORC1 output in TOP mRNA translation and regulates lifespan. www.nature.com/articles/s41...
nature.com
Lsp2 links mTORC1 to TOP mRNA translation and lifespan in Drosophila - Nature
In Drosophila, the protein Lsp2, which is induced by dietary essential amino acids, is a key physiological effector of mTORC1, and mutant flies that lack the Lsp2 gene exhibit reduced translation of T...
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Reposted by Fumiaki Obata
Nature @nature.com · 24/09/2026
A fruit-fly protein thought only to store amino acids in fact responds to nutritional deficiency in both development and adulthood, resulting in lifespan extension go.nature.com/4d6rRdo
go.nature.com
Surprising protein links dietary restriction to increased lifespan in flies
A fruit-fly protein thought only to store amino acids in fact responds to nutritional deficiency in both development and adulthood, resulting in lifespan extension.
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Fumiaki Obata @obataf-lab.bsky.social · 25/09/2026
Our new study just out @nature.com Together with Koshi Imami @RIKEN IMS, Hina Kosakamoto found out the key molecule mediating lifespan extension by early life dietary restriction! www.nature.com/articles/s41...
nature.com
Lsp2 links early-life diet to adult translation and lifespan in Drosophila - Nature
Isotope tracing is used to determine the fate of larval dietary amino acids in adult flies, and identifies Lsp2 as a key regulator of translation and lifespan that forms the molecular basis of the eff...
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RIKEN Center for Biosystems Dynamics Research (BDR) @riken-bdr.bsky.social · 18/11/2025
【採用情報】 理研BDRの栄養応答研究チーム (チームディレクター: 小幡史明)から、研究員または特別研究員の公募が出ています。 栄養に関する研究に興味のある方はぜひ! 随時受付、審査を行い、ポストが埋まり次第締め切ります。 詳細は👇 www.riken.jp/careers/rese...
riken.jp
研究員または特別研究員募集 栄養応答研究チーム(25-1968)
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Fumiaki Obata @obataf-lab.bsky.social · 14/12/2025
New study from the lab posted to @biorxivpreprint.bsky.social PhD student Yuka discovered the beautiful mechanism for overcoming nutrient deficiency by microbiota and a new metabolic pathway! Dietary requirement of choline for phospholipids is very complicated www.biorxiv.org/content/10.6...
biorxiv.org
Dual Metabolic Compensation to Dietary Choline Deficiency by the Drosophila Hologenome
Coping with an unbalanced diet is critical in animals. However, the mechanisms that mitigate deficiencies of specific nutrients, such as choline, remain poorly understood. Choline is converted to phos...
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Reposted by Fumiaki Obata
Nature Metabolism @natmetabolism.nature.com · 01/12/2025
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Fat sensory cues in early life program central response to food and obesity
Nature Metabolism, Published online: 01 December 2025; doi:10.1038/s42255-025-01405-8Non-nutritive sensory components of high-fat diet, such as bacon flavour, are sufficient to impair metabolic health in offspring in mice.
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Fumiaki Obata @obataf-lab.bsky.social · 27/11/2025
Our new study out @BMC Biology. The first Mosquito study from the lab, driven by a great effort of phd student Yusuke Kato with the hard work of Chisako Sakuma. Amino acid economy meets a blood-sucking insect. link.springer.com/10.1186/s129...
link.springer.com
Temporal changes in amino acid profiles coordinate mosquito physiology and egg maturation in Aedes aegypti - BMC Biology
Background Female Aedes aegypti mosquitoes utilize host blood to support egg maturation by digesting, absorbing, and metabolizing its components. Among these, amino acids are essential as both signali...
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Fumiaki Obata @obataf-lab.bsky.social · 24/11/2025
a tiny contribution from my lab to the great work! Amino acid biology in tumour growth. Congrats! A pint ahead in Melbourne!
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Reposted by Fumiaki Obata
Louise Cheng @chengflylab.bsky.social · 24/11/2025
Tagging first author @joannaqd.bsky.social and collaborators @obataf-lab.bsky.social
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PLOS Biology @plosbiology.org · 19/11/2025
How does the #tumor #microenvironment modulate sensitivity to nutrient restriction? @chengflylab.bsky.social &co show that this is regulated by the SCL36 amino acid transporter Pathetic at the #BloodBrainBarrier perineural glial cells in #Drosophila #brain tumors @plosbiology.org 🧪 plos.io/4ibwXWY
Left: Maximum projection images of elavC155QF>QUAS-prosRi tumor brains stained with Repo and Dpn. The animals were moved from standard food to chemically defined diet (CDD) (top left), CDD minus Leu (top right), CDD minus Ile (bottom left), and CDD minus Met (bottom right) at 72hALH and dissected at 120hALH. Right: Schematic depicting the working model. Nutrient Restriction (NR) inhibits BBB glia expansion, which consequently limits brain tumor growth. The authors show that NR inhibits the expression of fat body and glia-derived Ilp6, causing downregulation of the InR/PI3K pathway in BBB glia. This results in a reduction in Path expression and the downstream mTOR-S6K pathway, causing a slowdown of BBB glial cell cycle progression. Path downregulation and defects in BBB expansion consequently led to a decrease in brain AAs, such as Leu, which hinders brain tumor protein synthesis to slow down tumor growth. Data information: ALH, after larvae hatching.
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Reposted by Fumiaki Obata
Dan J. Hayman @danjhayman.bsky.social · 24/09/2025
Latest exciting work from me and @mirresimons.bsky.social (and the first bit of data from my @vivensa.bsky.social ECR Fellowship) now out as a preprint, looking at effects of knocking down individual spliceosome components on lifespan in vivo: www.biorxiv.org/content/10.1...
biorxiv.org
Knockdown of the fly spliceosome component Rbp1(orthologue of SRSF1) extends lifespan
Biological regulation is a highly intricate process and involves many layers of complexity even at the RNA level. Alternative splicing is crucial in the regulation of which components of a protein-cod...
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Reposted by Fumiaki Obata
Nature Metabolism @natmetabolism.nature.com · 17/09/2025
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Tracking dietary exposures with metabolite biomarkers
Nature Metabolism, Published online: 17 September 2025; doi:10.1038/s42255-025-01370-2Plasma metabolic variation reflects dietary exposures. We show that biomarker panels are objective and reproducible in assessing dietary intake and quality, and can accurately predict clinical phenotypes such as diabetes and hypertension.
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Fumiaki Obata @obataf-lab.bsky.social · 13/09/2025
New study out! We developed the protocol for dietary manipulation of protein and amino acids in marmoset! FGF21 induction and taurine drop observed. Achieved by intra-RIKEN collab and the first author Yuka's effort. Here comes Primate Nutritional Biology! www.nature.com/articles/s41...
nature.com
Manipulating dietary protein and amino acids in the common marmoset Callithrix jacchus impacts circulating metabolites and FGF21 levels - Scientific Reports
Scientific Reports - Manipulating dietary protein and amino acids in the common marmoset Callithrix jacchus impacts circulating metabolites and FGF21 levels
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Reposted by Fumiaki Obata
Nature @nature.com · 09/09/2025
A long-standing mystery in the development of fly embryos has been resolved go.nature.com/4nhVxaa
go.nature.com
Flies evolved a shock-absorber tissue used during embryonic development
The role of tissue that forms between the head and trunk of a fly embryo has been unclear. It turns out that it absorbs forces when nearby cells move and divide.
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岩波書店 @iwanami.co.jp · 27/08/2025
「読み進めるほどに「腹八分目」という漠然とした言葉の奥深さが沁みてくる」 「江戸時代に「腹八分目」と言い表したヒト(貝原益軒)の直感にも感心する、楽しい読書だった」 8/24読売新聞で、奈倉有里さんが小幡史明『「腹八分目」の生物学』をご書評くださいました。☞ iwnm.jp/029735 お陰さまで売れています!
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岩波書店自然科学書編集部 @iwanami-ns.bsky.social · 25/08/2025
!重版決定! 先月刊行された『「腹八分目」の生物学――健康長寿の食とはなにか』(http://iwnm.jp/029735)、早々に2刷が決定しました! なお現在、一部ネット書店でカート落ちが発生しております。お近くのリアル書店などで、ぜひお探しいただけますと幸いです。 近日中に電子書籍版も配信開始予定ですので、そちらもぜひご利用ください🐭
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Reposted by Fumiaki Obata
Alex Gould Lab @alexgouldlab.bsky.social · 14/08/2025
Drosophila research without FlyBase would be untenable. Time for all labs who can afford it to step up.
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Fumiaki Obata @obataf-lab.bsky.social · 07/08/2025
自分でも気に入っている部分がいくつかあるのですが、そのうちの一つがここのカロリーです。ドーナツはカロリーゼロの衝撃!
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Reposted by Fumiaki Obata
岩波書店自然科学書編集部 @iwanami-ns.bsky.social · 04/08/2025
8/3産経新聞で、小幡史明『「腹八分目」の生物学――健康長寿の食とはなにか』(iwnm.jp/029735)が紹介されました: 「気鋭の研究者による「食の科学」の一冊」 「生存戦略とも結びついた食の奥深さに驚かされる」 www.sankei.com/article/2025...
sankei.com
<書評>長寿のカギは「タンパク質の摂取量」 『「腹八分目」の生物学』小幡史明著
「腹八分目」の戒めは、江戸時代から『養生訓』などで広く知られた健康と長寿のための経験則。20世紀に入り、ラットやミジンコといった動物を使った実験でも、食事制限…
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Reposted by Fumiaki Obata
岩波書店自然科学書編集部 @iwanami-ns.bsky.social · 23/07/2025
『「腹八分目」の生物学――健康長寿の食とはなにか』(iwnm.jp/029735)著者の小幡史明さんに、岩波書店本社へおいでいただきました! ご著書と記念撮影です。 ただいま好評発売中。 腹八分目のかたも、つい食べ過ぎちゃうかたも、ぜひどうぞ。
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Nature Metabolism @natmetabolism.nature.com · 19/07/2025
#Throwback 🧪 COMMENT | ‪ Subcellular quantitative imaging of metabolites at the organelle level @siuzdak.bsky.social‬
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Subcellular quantitative imaging of metabolites at the organelle level - Nature Metabolism
Subcellular quantitative analysis has been a long-standing goal of mass spectrometry imaging, but was originally thought to be unattainable. However, recent advances have made organelle-level absolute quantification through mass spectrometry imaging a reality, thanks to the development of nano secondary ion mass spectrometry.
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岩波書店自然科学書編集部 @iwanami-ns.bsky.social · 15/07/2025
\ 本日 ☆ 刊行 / 小幡史明『「腹八分目」の生物学――健康長寿の食とはなにか』(岩波科学ライブラリー) 試し読みなどはこちら! → iwnm.jp/029735 長寿の鍵となる栄養素とは。腹八分目で、老化そのものも防げるか。不老長寿の薬は……!? 飽くなき探究をいきいきと伝える。 ※電子書籍は8月配信予定です。
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Reposted by Fumiaki Obata
Filipe De Vadder @filipedevadder.bsky.social · 12/07/2025
📢 New preprint: “Liver FGF21 mediates sex-specific adaptation to juvenile protein malnutrition” Led by @ameliejoly.bsky.social, co-supervised with @francoisleulier.bsky.social. We’re proud to share this story. 👉 www.biorxiv.org/content/10.1...
biorxiv.org
Liver FGF21 mediates sex-specific adaptation to juvenile protein malnutrition
Dietary protein sufficiency during childhood is essential for healthy growth and tissue development. Chronic protein deficiency leads to stunting, height-for-age more than two standard deviations belo...
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Fumiaki Obata @obataf-lab.bsky.social · 15/06/2025
A new review from the lab is out. A phd student Ayano and me summerises the current view of amino acid signalling, revealed by Drosophila genetics. www.sciencedirect.com/science/arti...
sciencedirect.com
Nutrient sensing and signalling of specific amino acids: Insights from Drosophila study
Maintaining amino acid (AA) homeostasis is necessary for organisms. To achieve this, organisms have evolved various signalling pathways regulated by s…
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Fillip Port @crisprflydesign.bsky.social · 26/05/2025
Why use #CRISPR in #Drosophila when RNAi works so well? Because for some genes well is not good enough. Check out new preprint from the lab demonstrating a role for Vps15 in Wingless trafficking. Something that was missed in several RNAi screens. www.biorxiv.org/content/10.1...
Images from the linked preprint showing Wingless stainings in the Drosophila wing imaginal disc. Targeting vps15 with two indepependent RNAi lines (paper also shows the same with a third line) does not result in a phenotype. In contrast, targeting vps15 with two independent sgRNA constructs and Cas9 results in strong accumulation of Wingless protein in perturbed cells.
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Fillip Port @crisprflydesign.bsky.social · 26/05/2025
CRISPR mutagenesis is also not perfect. A common limitation is generation of genetic mosaics, where only some cells carry gene knockouts. But our new generation of tools substatially improves on that. Described in the preprint below with flies on their way to VDRC: www.biorxiv.org/content/10.1...
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Christian Frezza @frezzalab.bsky.social · 19/05/2025
De novo serine biosynthesis is protective in mitochondrial disease: Cell Reports www.cell.com/cell-reports...
cell.com
De novo serine biosynthesis is protective in mitochondrial disease
Jackson et al. show that serine becomes an essential amino acid in mitochondrial muscle disease, delaying disease progression. Blocking local biosynthesis of serine challenges cellular phospholipid ho...
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Reposted by Fumiaki Obata
Santos lab @santoslab.bsky.social · 18/05/2025
www.crick.ac.uk/news/2025-05... by Clare Green @crick.ac.uk
crick.ac.uk
New stem cell model sheds light on human amniotic sac development
Researchers at the Francis Crick Institute have developed a new stem cell model of the mature human amniotic sac, which replicates development of the tissues supporting the embryo from two to four wee...
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Christian Frezza @frezzalab.bsky.social · 14/05/2025
Taurine from tumour niche drives glycolysis to promote leukaemogenesis www.nature.com/articles/s41...
nature.com
Taurine from tumour niche drives glycolysis to promote leukaemogenesis - Nature
The taurine–taurine transporter axis is a critical dependency of aggressive myeloid leukaemias.
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Nature Portfolio @natureportfolio.nature.com · 23/04/2025
Calorie restriction extends lifespan in many animal models, but the effects in humans and the mechanisms of action are not clear. A Review in Nature Reviews Endocrinology summarizes evidence regarding potential adverse effects of calorie restriction. go.nature.com/42XV1Xa 🔒
This is figure 3, which shows the molecular signalling network in the hypothalamus that regulates hunger.
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Nature Metabolism @natmetabolism.nature.com · 21/04/2025
RESEARCH | TS Nicolaisen, B Kiens et al. (UCPH, DK) Dietary protein restriction in men increases energy intake to maintain body weight partly by FGF21-driven alterations to adipose mitochondria
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Dietary protein restriction elevates FGF21 levels and energy requirements to maintain body weight in lean men - Nature Metabolism
Dietary protein restriction in healthy, lean men elicits an increased energy intake to maintain body weight, which is driven, at least in part, by FGF21-mediated alterations to adipose tissue mitochondria.
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Fumiaki Obata @obataf-lab.bsky.social · 21/04/2025
We are happy to post our first study using common marmosets! We can now manipulate dietary amino acids in primate! FGF21 is highly responsive to dietary amino acids. Via a fruitful collaboration with Takuya Hayashi lab. www.biorxiv.org/cgi/content/...
biorxiv.org
Dietary amino acid manipulations in the common marmoset Callithrix jacchus impacts serum metabolites and FGF21 levels
Restricting dietary protein intake has metabolic and physiological benefits for animals. Rodent studies have identified the involvement of a hormone fibroblast growth factor 21 (FGF21), which is upreg...
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Christian Frezza @frezzalab.bsky.social · 18/04/2025
Mitochondria-organelle crosstalk in establishing compartmentalized metabolic homeostasis: Molecular Cell www.cell.com/molecular-ce...
cell.com
Mitochondria-organelle crosstalk in establishing compartmentalized metabolic homeostasis
Mitochondria are metabolic hubs that communicate with other organelles via metabolite-, lipid-, and signaling-molecule exchange facilitated by membrane contact sites (MCSs). MCSs, regulated by tetheri...
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Fumiaki Obata @obataf-lab.bsky.social · 15/04/2025
Amazing work done in the Rewitz lab where a gut hormone governs the protein appetite, sleep, and lifespan! more amino acid responsive hormones to come?
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Nature Metabolism @natmetabolism.nature.com · 14/04/2025
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A gut hormone governing protein appetite and longevity
Nature Metabolism, Published online: 14 April 2025; doi:10.1038/s42255-025-01278-xA study in Nature Metabolism reports a protein-responsive gut hormone that regulates appetite, sleep and organismal lifespan. This finding sheds light on the evolutionarily conserved endocrine system that controls dietary protein intake.
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Mirre Simons @mirresimons.bsky.social · 29/03/2025
Latest preprint. We tested the idea that dietary restriction (DR) is an ancient response. www.biorxiv.org/content/10.1... Across Drosophila the lifespan phenotype and the transcriptomic response to DR are conserved. Yet, many genes were Diptera (fly) specific. Mechanisms may not be conserved…
biorxiv.org
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Bardin Lab @bardinlab.bsky.social · 29/03/2025
This is very disturbing. Harvard PhD student Kseniia Petrova (Russian citizen) was arrested by ICE for transporting xenopus embryos into Boston from Paris. She has been detained in Louisiana since Feb. 16. www.theguardian.com/us-news/2025...
theguardian.com
Russian scientist working at Harvard detained by Ice at Boston airport
Kseniia Petrova was returning to the US from a trip to France when officials revoked her visa and detained her
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Fumiaki Obata @obataf-lab.bsky.social · 24/12/2024
new work out from the lab @cellreports.bsky.social A brave phd student Ayano revealed the mechanism how immune activation disrupts renal tubules! The key is a nonsecretory antimicrobial peptide! www.cell.com/cell-reports...
cell.com
A nonsecretory antimicrobial peptide mediates inflammatory organ damage in Drosophila renal tubules
Using the power of Drosophila genetics, Oi et al. identified a nonsecretory antimicrobial peptide, Attacin-D, as an essential factor in inflammatory organ damage in the renal tubules. This study highlights a key player in inflammatory organ injury.
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Fumiaki Obata @obataf-lab.bsky.social · 03/12/2024
Our review has been out! We summarised the current view how diet, esp. amino acids, regulate ageing and lifespan. It highlights context dependency, lifestage, sex, and others, and proposes how early life nutrient signals impact longevity. Check it! www.annualreviews.org/content/jour...
annualreviews.org
Regulatory Mechanisms of Aging Through the Nutritional and Metabolic Control of Amino Acid Signaling in Model Organisms | Annual Reviews
Life activities are supported by the intricate metabolic network that is fueled by nutrients. Nutritional and genetic studies in model organisms have determined that dietary restriction and certain mu...
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Miki Ebisuya @ebisuyamiki.bsky.social · 26/11/2024
We will have "Towards Redesigning Lifecycles" at RIKEN BDR, Kobe Japan, March 3-5! Gorgeous Speakers🤓, Free Registration🤑, Japan in Spring🌸. What else do you want? The oral abstract deadline is Dec 15. www2.bdr.riken.jp/sympo/2025/i...
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Christian Frezza @frezzalab.bsky.social · 22/11/2024
Dual impacts of serine/glycine-free diet in enhancing antitumor immunity and promoting evasion via PD-L1 lactylation 🧪 www.cell.com/cell-metabol...
cell.com
Dual impacts of serine/glycine-free diet in enhancing antitumor immunity and promoting evasion via PD-L1 lactylation
The serine/glycine-free diet inhibits CRC growth and enhances antitumor immunity but also promotes immune evasion through PD-L1 lactylation. It shows promise when combined with immunotherapy and has b...
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Fumiaki Obata @obataf-lab.bsky.social · 22/11/2024
Feastive season! and the end of 2024 is approaching
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Miki Ebisuya @ebisuyamiki.bsky.social · 21/11/2024
📢Register for the RIKEN BDR Symposium 2025 "Towards Redesigning Lifecycles," which will be held March 3-5, 2025 at @BDR_RIKEN Kobe Campus, Japan. Participation fee: FREE (separate fees required for lunch/banquet- optional) For details & deadlines👇 🔗https://www2.bdr.riken.jp/sympo/2025/
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EDRC2025 @edrc2025.bsky.social · 20/11/2024
Welcome to the #EDRC2025 account of the 28th European Drosophila Conference which will take place in Alicante from the 25th to the 28th of September 2025! Stay tuned for the upcoming news!
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Fumiaki Obata @obataf-lab.bsky.social · 17/11/2024
Is anyone creating a Drosophilist starter pack?
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