Reposted by Ryan Morin 🇨🇦Ming Tommy Tang @tommytang.bsky.social · 24/09/2026A tumour-derived organoid biobank maps cancer gene dependencies www.nature.com/articles/s4... 012
Reposted by Ryan Morin 🇨🇦Rob Noble @robjohnnoble.bsky.social · 24/09/2026The Moffitt Cancer Center is looking a new faculty member in Integrated Mathematical Oncology with "a track record in developing mathematical models for cancer research, strong publications in mathematical biology or computational oncology, and success securing grant funding".moffitt.wd108.myworkdayjobs.comOpen-Rank Tenure-earning Integrated Mathematical Oncology (IMO) FacultyWorking at Moffitt is both a career and a mission: to contribute to the prevention and cure of cancer. As the only National Cancer Institute-designated Comprehensive Cancer Center based in Florida, Mo... 014
Ryan Morin 🇨🇦 @morinryan.bsky.social · 14/07/2026BC Ferries: You'll need a reservation to take any major ferry so plan ahead! Also BC Ferries: Welcome to our waiting room, you are 999th in line. Just kidding! Now fuck off, our website is broken again. 010
Ryan Morin 🇨🇦 @morinryan.bsky.social · 16/06/2026LCR-modules: a collection of workflows for cancer genome analysis academic.oup.com/bioinformati... Ironically the Lymphoid Cancer Research (LCR) department, namesake of this toolkit, ceased to exist while the manuscript was under review 🫣academic.oup.comLCR-modules: a collection of workflows for cancer genome analysisAbstractMotivation. The surge of genomic data from advanced sequencing technologies is outpacing current analytical pipelines. We introduce LCR-modules, an 010
Ryan Morin 🇨🇦 @morinryan.bsky.social · 19/05/2026Our review on the state of genomic subtyping for DLBCL is out in BCD: Laying the Foundation for Clinically Actionable Genomic Subtyping in Diffuse Large B-cell Lymphoma tinyurl.com/dlbclbcd 🩸aacrjournals.orgLaying the Foundation for Clinically Actionable Genomic Subtyping in Diffuse Large B-cell LymphomaAbstractDiffuse large B-cell lymphoma (DLBCL) is clinically and genetically heterogeneous. The existence of genetically defined subtypes with therapeutic implications is clear. Additional consideratio... 000
Ryan Morin 🇨🇦 @morinryan.bsky.social · 14/05/2026Latest from the Morin lab: HNRNPU Mutations Redirect Cell Cycle Control to E2F in MYC-Driven Lymphomas 🩸 tinyurl.com/HNRNPU Congratulations and a huge thank you to lead author Quratulain (Annie) and all our collaborators!ashpublications.orgHNRNPU Mutations Redirect Cell Cycle Control to E2F in MYC-Driven LymphomasKey Points. HNRNPU loss-of-function mutations are a common feature of B-cell lymphomas with MYC rearrangementsReduced hnRNPU expression causes lower MYC ab 040
Ryan Morin 🇨🇦 @morinryan.bsky.social · 29/04/2026SPEN loss drives extra-follicular diffuse large B cell lymphoma with female-specific lethality and therapeutic vulnerabilities aacrjournals.org/cancerdiscov...aacrjournals.orgSPEN loss drives extra-follicular diffuse large B cell lymphoma with female-specific lethality and therapeutic vulnerabilitiesAbstract. Diffuse large B-cell lymphomas (DLBCL) are genetically and phenotypically heterogeneous, making diagnosis and treatment challenging. Current models suggest DLBCL derive from follicular B cel... 000
Reposted by Ryan Morin 🇨🇦Scholar Goggler bot @scholargoggler.bsky.social · 16/04/2026Pulled this together from Charles Koven's Scholar profile: Model, Carbon, Land, Forest, Climate, Soil @ckoven.bsky.social Create yours at scholargoggler.com #AcademicSky #ClimateChange #Carbon #ClimateScience 021
Reposted by Ryan Morin 🇨🇦Scholar Goggler bot @scholargoggler.bsky.social · 19/03/2026Overview of scholarly works by Jan Geert Hiddink, who writes a lot about benthic, bottom, fishing, marine, seabed, trawling @jangeerthiddink.bsky.social 043
Reposted by Ryan Morin 🇨🇦Carlos Scheidegger @cscheid.net · 20/03/2026Quarto v1.9 is out! We'll have an announcement blog post soon, but quarto.org/docs/download/ has the main highlights, including: - PDF accessibility in latex and typst - llms.txt support - third-party engine extensions Give it a whirl, and thanks! 04411
Reposted by Ryan Morin 🇨🇦Scholar Haiku Bot @scholarhaiku.bsky.social · 17/03/2026Ultraviolet disinfection of water, germicidal light A #haiku inspired by Sara E. Beck's publications bsky handle: realsarabeck.bsky.socialrealsarabeck.bsky.socialSara Beck, Ph.D. (@realsarabeck.bsky.social)Asst. Professor @ University of British Columbia in environmental engineering, researching water disinfection and water reuse 🦠🧬🧪|www.becklabubc.com | Former @NASA flight controller | Endurance Athlet... 041
Reposted by Ryan Morin 🇨🇦Scholar Haiku Bot @scholarhaiku.bsky.social · 17/03/2026Airborne emissions, Aerosol transmission moves Virus through the air. A #haiku inspired by Linsey C. Marr's publications bsky handle: linseymarr.bsky.sociallinseymarr.bsky.socialLinsey Marr (@linseymarr.bsky.social)Engineering professor at Virginia Tech with expertise in air pollution, airborne microbes, nanotechnology. Avid recreational athlete. 021
Reposted by Ryan Morin 🇨🇦Scholar Haiku Bot @scholarhaiku.bsky.social · 17/03/2026Disordered protein, Molecular dynamics, Folding, structure, change. A #haiku inspired by Kresten Lindorff-Larsen's publications bsky handle: lindorfflarsen.bsky.sociallindorfflarsen.bsky.socialKresten Lindorff-Larsen (@lindorfflarsen.bsky.social)Protein and coffee lover, father of two, professor of biophysics and sudo scientist at the Linderstrøm-Lang Centre for Protein Science, University of Copenhagen 🇩🇰 021
Ryan Morin 🇨🇦 @morinryan.bsky.social · 06/12/2025I’ll definitely be stopping by the puppy playground at every opportunity during #ASH25 040
Reposted by Ryan Morin 🇨🇦SFU Faculty of Science @sfuscience.bsky.social · 05/12/2025The Chemistree is back! Drop by the SFU Chemistry main office to see it. 0121
Reposted by Ryan Morin 🇨🇦Benjamin Haibe-Kains @bhaibeka.bsky.social · 24/11/2025🚀 Ready to lead the next frontier of AI in health care and research? UHN is hiring a Coordinator to spearhead the Blue Vest #AI Initiative at @PMResearch_UHN @PM_CDI to train student volunteers and empower clinicians & scientists. 📍 Toronto 🔗 Apply: smrtr.io/vC7zhsmrtr.io 025
Reposted by Ryan Morin 🇨🇦Ezra Levin ❌👑 @ezralevin.bsky.social · 28/10/2025Spotify is now running ICE recruitment ads. We asked them to stop. They ignored us. Let's show them what we showed Disney. No Kings, No Collaborators, No Capitulators. indivisible.org/cancel-spotifyindivisible.orgDon’t Stream Fascism: Cancel Spotify 24246512570
Ryan Morin 🇨🇦 @morinryan.bsky.social · 21/10/2025Having way too much fun letting NotebookLM explain some of our recent papers in cartoon form 🩸🧬 www.youtube.com/watch?v=5k1B...youtube.comGenetic Subdivisions of Follicular Lymphoma Define Transformation RiskYouTube video by Ryan Morin 030
Reposted by Ryan Morin 🇨🇦Paul Rainey @paulbrainey.bsky.social · 06/10/2025Two new positions are available at the MPI for Evolutionary Biology to support development of our genomics facility. Both stand to become permanent. Both offer a ton of opportunity to engage in a wide range of creative science. Pls repost 🙏 www.evolbio.mpg.de/3838377/job_...evolbio.mpg.deTwo full-time positions | Bioinformatician (m/f/d) + Applications Specialist (m/f/d) - Molecular BiologyThe Genome Facility at the Max Planck Institute for Evolutionary Biology in Plön is seeking to fill two positions (full time) to support and expand our core facility services. 02031
Reposted by Ryan Morin 🇨🇦BK. Titanji @boghuma.bsky.social · 06/10/2025A new Nature Medicine study analyzing health records from >100 million people in the US offers compelling evidence that reactivation of varicella-zoster virus (VZV) ,the same virus that causes chickenpox and shingles may contribute to dementia risk. www.nature.com/articles/s41...nature.comVaricella-zoster virus reactivation and the risk of dementia - Nature MedicineLarge-scale longitudinal health records reveal consistent association of varicella-zoster virus reactivation with dementia. 721484
Reposted by Ryan Morin 🇨🇦medRxivpreprint @medrxivpreprint.bsky.social · 19/09/2025DLBCLone: A unified framework for neighbourhood-based genetic subtyping of lymphomas www.medrxiv.org/content/10.1101/202… 001
Ryan Morin 🇨🇦 @morinryan.bsky.social · 26/08/2025Team Lymphomania (students/staff of the Morin Lab) is doing the Terry Fox Run as usual. We each dedicate our time to uncovering molecular causes of lymphoma, building paths to better treatments.🏃♂️🧬 🙏 We are grateful for your support run.terryfox.ca/team/lymphom... #TerryFoxRun #LymphomaResearchrun.terryfox.caTerry Fox RunTerry Fox Run 071
Ryan Morin 🇨🇦 @morinryan.bsky.social · 01/07/2025Post your favourite Doctor Who. Wrong answers only 120
Reposted by Ryan Morin 🇨🇦Graham Collins @graham74gc.bsky.social · 18/06/2025@dgermain21.bsky.social - fantastic work on LymphomaMAPs (microenv of DLBCL) looking at prognosis of CAR-T therapy. Showed that TEX archetype associated with signif worse outcome. Assoc with • exhausted T-cells • super-activated macrophages. #ICML18 021
Reposted by Ryan Morin 🇨🇦Shematologist, MD @shematologist.medsky.social · 14/06/2025Vaccines have literally saved more than 150 million lives over the last 50 years and prevented much more morbidity but hold up guys somebody with a brain worm knows better 7360117
Reposted by Ryan Morin 🇨🇦Manel Esteller @manelesteller.bsky.social · 10/05/2025Excited to report our Blood Cancer Discovery @theaacr.bsky.social article showing how DNA #methylation in #Burkitt #Lymphoma #BL impacts clinical outcome. Team effort co-led by @morinryan.bsky.social @sfu.ca group and our lab at @carrerasijc.bsky.social @ub.edu aacrjournals.org/bloodcancerd... 3183
Reposted by Ryan Morin 🇨🇦Dr. Lucky Tran @luckytran.com · 02/05/2025The Human Genome Project cost taxpayers $3 Billion. Two decades on, it has generated a staggering return on investment of $1 Trillion, with benefits in medicine, agriculture, energy, the environment, & more. If you want to boost the economy, funding science is one of the best things you could do. 5437471156
Reposted by Ryan Morin 🇨🇦Robert Aboukhalil @robert.bio · 05/03/2025In 2024, sandbox.bio had >170,000 tutorial page views! 🥳 The most popular tutorials were: 1. Terminal basics 2. Genomic intervals with bedtools 3. Terminal exercises 4. Data exploration with awk 5. DNA sequencing QC Check them out here: sandbox.bio/tutorials 083
Reposted by Ryan Morin 🇨🇦Ron Filipkowski @ronfilipkowski.bsky.social · 04/03/2025Justin Trudeau gave the exact kind of press conference today that we have been waiting for from our Democratic leaders. Watch it and learn from it. No gimmicks, no stunts, no script, no platitudes, no slogans, no games. Just straight talk, honesty, sincerity and facts. 828342157404
Reposted by Ryan Morin 🇨🇦Caroline-of-the-Cornfields @ahoycaroline.com · 26/02/2025I’m somehow on a Heritage Foundation mailing list (😂) and they sent a survey to see what we think of DOGE. Who wants to offer some m-fing feedback?!? secured.heritage.org/the-heritage... Please share with a friend or a thousand :)secured.heritage.org 148492094543
Reposted by Ryan Morin 🇨🇦American Society of Hematology @ash.hematology.org · 27/02/2025Tomorrow is #RareDiseaseDay! Did you know that a disease is considered rare when it affects fewer than 1 in 2,000 people? But with 7,000+ rare diseases worldwide, they collectively affect 300M+ people. Support the ASH Research Awards Fund 🔗 bit.ly/3XjCFNr #hematology #HemeSky #BloodSky 0115
Ryan Morin 🇨🇦 @morinryan.bsky.social · 27/02/2025"valr provides tools to read and manipulate genome intervals and signals, similar to the BEDtools suite." I wonder if they considered naming it bedRtools? rnabioco.github.io/valr/rnabioco.github.ioGenome Interval ArithmeticRead and manipulate genome intervals and signals. Provides functionality similar to command-line tool suites within R, enabling interactive analysis and visualization of genome-scale data. Riemondy et... 100
Reposted by Ryan Morin 🇨🇦Colette Delawalla, PhD @cdelawalla.bsky.social · 10/02/2025Get in dorks, we're going protesting! STAND UP FOR SCIENCE WITH US ON MARCH 7TH, 2025 WASHINGTON DC AND EVERY STATE CAPITOL Because science is for everyone! Find us at www.standupforscience2025.org #standupforscience2025 #scienceforall #sciencenotsilence 491529788
Reposted by Ryan Morin 🇨🇦Luis Ostrosky, MD, FIDSA @drluiso.bsky.social · 15/02/2025If you are an NIH or CDC scientist that lost your job, we have a home for you at UTHealth. I’m hiring physician scientists and we also have transplant ID fellowship slots open. Contact me. #IDSky #MedSky 8326187
Ryan Morin 🇨🇦 @morinryan.bsky.social · 15/02/2025Happy #FlagDay from ScholarGoggler scholargoggler.com 0103
Reposted by Ryan Morin 🇨🇦Willem van Schaik @wvschaik.bsky.social · 06/02/2025Remember that Europe (@ebi.embl.org) has mirrored all these services and they will keep on running. They look and feel a bit different but do the same thing. I think @ewanbirney.bsky.social should be able to confirm. www.europepmc.org www.ebi.ac.uk/jdispatcher/...europepmc.orgEurope PMCHome - Europe PMCEurope PMC is an archive of life sciences journal literature. 9196111
Reposted by Ryan Morin 🇨🇦Stephen Turner @stephenturner.us · 06/02/2025Benchmarking 13 tools for mutational signature attribution, including a new and improved algorithm academic.oup.com/bib/article/26/1/b… 🧬🖥️🧪 github.com/Rozen-Lab/sig_attributio… 062
Ryan Morin 🇨🇦 @morinryan.bsky.social · 06/02/2025Looks like a bunch of people are trying to make a back-up before it's too late! 010
Ryan Morin 🇨🇦 @morinryan.bsky.social · 04/02/2025beyond reckless! "(staff) hoping to prevent as much damage as possible — [...] avoiding crashes or a system-wide breakdown caused by rapidly pushing new code into production with a limited knowledge of the system and its dependencies across the federal government" 040
Reposted by Ryan Morin 🇨🇦Andy Fraser @andyfraser.bsky.social · 04/02/2025Delighted to share our latest paper describing a method to read the levels of hundreds of metabolites or drugs in parallel using DNA sequencing. This method, which we call ‘smol-seq’ (Small MOLecule sequencing), harnesses the power of DNA sequencing for metabolite detection: rdcu.be/d8xLv (1/6)rdcu.beQuantifying metabolites using structure-switching aptamers coupled to DNA sequencingNature Biotechnology - Metabolites can be quantified using a combination of aptamers and DNA barcodes. 1115962
Ryan Morin 🇨🇦 @morinryan.bsky.social · 04/02/2025Does anyone happen to have a backup of PubMed, just in case? How about dbGaP? Genomic Data Commons? 😬 350
Reposted by Ryan Morin 🇨🇦News Eye @newseye.bsky.social · 03/02/2025Bruce MacKinnon, the editorial cartoonist at the Halifax Chronicle-Herald, drew this last November. No newspaper would print it. It now deserves an outing. 2526231011
Reposted by Ryan Morin 🇨🇦Stephen Turner @stephenturner.us · 29/01/2025The Google Scholar PDF Reader extension has always shown an outline, makes references clickable/linked to GScholar (screenshot 1). Now it provides an AI summary of each section (screenshot 2). chromewebstore.google.com/detail/go… 1103
Reposted by Ryan Morin 🇨🇦Eric Topol @erictopol.bsky.social · 29/01/2025The "kitchen sink" of omics to solve the basis for an undiagnosed disease: long read genome , transcriptome, methytome, epigenome, all synchronized (a first) www.nature.com/articles/s41...nature.comSynchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition - Nature GeneticsSimultaneous profiling of the genome, methylome, epigenome and transcriptome using single-molecule chromatin fiber sequencing and multiplexed arrays isoform sequencing identifies the genetic and molec... 716249