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Kelvin (Zewen) Tuong

@kelvintuong.bsky.social
101 followers 161 following 12 posts

Immunology and bioinformatics. TCR/BCR and single-cell. NHMRC Emerging Leadership Fellow, Associate Professor, Computational Immunology, The University of Queensland www.github.com/zktuong/dandelion

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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 09/02/2026
#Connect #Collaborate #Innovate The organising committee for the #ASI Clinical Translation School & #FIMSA Advanced Immunology Course 2026 is happy to announce that registrations are now open! Brisbane, Australia 🗓 27–30 August 2026 Apply now! www.immunology.org.au/events/ASI-C... #science #FIMSA
immunology.org.au
ASI Clinical Translation School & FIMSA Advanced Immunology Course 2026
You're invited to the ASI Clinical Translation School & FIMSA Advanced Immunology Course 2026The Organising Committee cordially invites you to ...
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Xuehan Lu @xuehan-lu.bsky.social · 13/10/2025
Proud to share our review with colleagues across UQFI, IMB, QIMR, AIBN, Child Health Research Centre, and KIRAMS. We discuss how cell–cell interaction in TME guide precision oncology 🔗https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-025-01518-5 #PrecisionOncology #SpatialOmics
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A/Prof Sam Stehbens PhD (She/Her) @samstehbens.bsky.social · 23/07/2025
Fantastic talk from @kelvintuong.bsky.social at IMB #UQ this morning. Importantly …another scientist who uses #cats in their talk. #CatsOfAcademia #IMB-alumni
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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 01/07/2025
dandelionR: Single-cell immune repertoire trajectory analysis in R is out! www.sciencedirect.com/science/arti... Checkout our package at github.com/tuonglab/dan... and on Bioconductor 3.21 onwards! Thanks to everyone involved! @thehumanborch.bsky.social
sciencedirect.com
dandelionR: Single-cell immune repertoire trajectory analysis in R
Integration of single-cell RNA-sequencing (scRNA-seq) and adaptive immune receptor (AIR) sequencing (scVDJ-seq) is extremely powerful in studying lymp…
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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 23/05/2025
Data standards for single‐cell RNA‐sequencing of paediatric cancer - Xu - 2025 - Clinical & Translational Immunology - Wiley Online Library onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
<em>Clinical & Translational Immunology</em> | ASI Journal | Wiley Online Library
Publicly available scRNA-seq data can support new research ideas, especially in resource-limited settings, but the lack of standards complicates data validation and analysis. In this article, we revi....
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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 15/05/2025
New research out from the Belz lab! Very happy to have played a small role in this amazing work!
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Jhelam N. Deshpande @djhelam1.bsky.social · 06/04/2025
Glad that the first thing that I share on here is our (@efronhofer.bsky.social , Vasilis Dakos and Oliver Kaltz) work from my PhD thesis at @isemevol.bsky.social on host parasite eco-evolution in spatial networks out now in Evolution Letters @evolletters.bsky.social ! doi.org/10.1093/evle...
doi.org
Landscape structure as a driver of eco-evolution in host–parasite systems
Abstract. Spatial network structure of biological systems drives ecology and evolution by distributing organisms and their genes. The ubiquitous host–paras
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Michelle Linterman @linterman.bsky.social · 03/04/2025
Great to have our paper out in @pnas.org showing that lung B cells in ectopic germinal centers undergo affinity maturation. @smguillaume.bsky.social @wsfoster.bsky.social @sanmarti92.bsky.social @emae-watson.bsky.social Silvia Innocentin, Grant Kennedy & Alice Denton. doi.org/10.1073/pnas...
doi.org
Lung B cells in ectopic germinal centers undergo affinity maturation | PNAS
The lungs are constantly exposed to the external environment and a myriad of antigenic challenges within the air. Chronic exposure to allergens and...
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Waggoner Lab @labwaggoner.bsky.social · 03/04/2025
Lung B cells in ectopic germinal centers undergo affinity maturation www.pnas.org/doi/10.1073/... @linterman.bsky.social @smguillaume.bsky.social @wsfoster.bsky.social @sanmarti92.bsky.social @emae-watson.bsky.social
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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 01/04/2025
CellPhoneDB v5 is officially published! nature.com/articles/s41... Very happy to have played a small role in it by developing some tools to help visualise the complex cell-cell interaction data! #SingleCell
nature.com
CellPhoneDB v5: inferring cell–cell communication from single-cell multiomics data - Nature Protocols
CellPhoneDB combines a curated database of receptor–ligand interactions with methods to infer cell–cell communication from single-cell expression data. This protocol update describes an expanded datab...
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Ben Hogan @benjhogan.bsky.social · 05/03/2025
We are recruiting a group leader in laboratory research at Peter Mac Cancer Centre in Melbourne, Australia 🔬🦘💥 Work in a cutting edge research environment in a vibrant world city! We value research excellence, creativity and diversity. Join us! careers.petermac.org/job/MELBOURN...
careers.petermac.org
Group Leader
Group Leader
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AI x Bio Discovery @aixbiobot.bsky.social · 06/03/2025
TEDDY: A Family Of Foundation Models For Understanding Single Cell Biology [new] Foundation models trained on a large single-cell dataset with biological annotations enhance disease state identification, with improvements scaling with size.
TEDDY: A Family Of Foundation Models For Understanding Single Cell   BiologyFigure 1Figure 2Figure 4
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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 25/02/2025
Very happy to share that I got lucky this round and was successful in my #NHMRC Investigator Grant!
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Waggoner Lab @labwaggoner.bsky.social · 20/02/2025
Disease diagnostics using machine learning of B cell and T cell receptor sequences @science.org www.science.org/doi/10.1126/... @zazius.bsky.social @anshulkundaje.bsky.social @scottboydlab.bsky.social
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Shicheng Guo @shihcheng.bsky.social · 13/02/2025
B cells are crucial in infection, inflammation & cancer, acting at inflammation sites & forming tissue-resident memory. Impact on therapy & outcomes is profound. #BcellPower PMID:39910240, Nat Rev Immunol 2025, @NatRevImmunol doi.org/10.1038/s41577-025-01137-6
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Waggoner Lab @labwaggoner.bsky.social · 09/02/2025
NKG7 is a stable marker of cytotoxicity across immune contexts and within the tumor microenvironment www.biorxiv.org/content/10.1... @eomesodermin.bsky.social @nsssusanna.bsky.social @rturiello.bsky.social
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Kelvin (Zewen) Tuong @kelvintuong.bsky.social · 08/02/2025
#single-cell Immune Repertoire Trajectory analysis in R www.biorxiv.org/content/10.1...
biorxiv.org
dandelionR: Single-cell immune repertoire trajectory analysis in R
Integration of single-cell RNA-sequencing (scRNA-seq) and adaptive immune receptor (AIR) sequencing (scVDJ-seq) is extremely powerful in studying lymphocyte development. A python-based package, Dandel...
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Petter Brodin @petterbrodin.bsky.social · 05/02/2025
Thanks for highlighting! Great session
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Waggoner Lab @labwaggoner.bsky.social · 06/02/2025
Review @natrevimmunol.bsky.social @laurenrodda.bsky.social @georgecelis.bsky.social B cells in non-lymphoid tissues www.nature.com/articles/s41...
nature.com
B cells in non-lymphoid tissues - Nature Reviews Immunology
B cells are major drivers of systemic immunity, but they also act locally in non-lymphoid organs. This Review highlights new insights into mechanisms of tissue B cell function as well as efforts to le...
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Waggoner Lab @labwaggoner.bsky.social · 31/01/2025
Temporal profiling of human lymphoid tissues reveals coordinated defense against SARS-CoV-2 challenge @natimmunol.bsky.social www.nature.com/articles/s41... www.nature.com/articles/s41...
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Waggoner Lab @labwaggoner.bsky.social · 24/01/2025
Mapping pre-existing immune landscapes to predict vaccine responses doi.org/10.1101/2025...
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Journal of Experimental Medicine @jem.org · 23/01/2025
Our new #immunology collection highlights recent studies on barrier immunity, microbiota, molecular immunology, neuroimmunology, and stem cells and regeneration. Explore new research from JEM to accompany the @midwinter-immun.bsky.social Conference! 📚👉 buff.ly/4geAP6W
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Stephen Turner @stephenturner.us · 23/01/2025
Mapping cells through time and space with moscot www.nature.com/articles/s41586-024-… 🧬🖥️🧪 github.com/theislab/moscot
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Waggoner Lab @labwaggoner.bsky.social · 23/01/2025
A gut protozoan plays a key role in shaping the immunological steady state of the lung @cellcellpress.bsky.social Preview by @benjmarsland.bsky.social www.cell.com/cell/fulltex... Manuscript from @theonlylabever.bsky.social www.cell.com/cell/fulltex...
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Miguel Reina-Campos @reinacampos.bsky.social · 22/01/2025
It turns out the immune system is playing 4D chess while we thought it was just playing checkers. Using #spatialtranscriptomics from @10xgenomics.bsky.social and @vizgen.bsky.social we were able to peek into the secret lives of tissue resident T cells in the gut as they form after infection 1/n
nature.com
Tissue-resident memory CD8 T cell diversity is spatiotemporally imprinted - Nature
Profiling of the location and transcriptome of tissue-resident memory&nbsp;CD8 T cell formation at single-transcript resolution&nbsp;finds regionalized signalling as the basis of immune diversity in t...
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Waggoner Lab @labwaggoner.bsky.social · 22/01/2025
seq2PRINT framework applied to scATAT-seq human bone marrow data reveals organization of Cis-regulatory elements across differentiation and ageing @nature.com www.nature.com/articles/s41...
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International Union of Immunological Societies @iuis-online.bsky.social · 22/01/2025
We are excited to share that #IUIS2025 in Vienna, Austria will include a plenary session with speakers, Dr. Laura Mackay and Dr. Donna Farber, on "Immune Memory and Tissue Residency"! Learn more & register at: www.iuis2025.org
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Tamim Ahsan @tamim-ahsan.bsky.social · 22/01/2025
Human microglia atlas unmasks subtype-specific roles of microglia in neurodegenerative disorders. #single-cell #single-nucleus #omics #neurodegenration #microglia doi.org/10.1038/s414...
doi.org
The Human Microglia Atlas (HuMicA) unravels changes in disease-associated microglia subsets across neurodegenerative conditions - Nature Communications
The Human Microglia Atlas includes 91,716 brain immune cells covering six neurologic pathologies. It characterizes the signatures of nine populations and describes the expansion of GPNMB-high microgli...
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Rod Rahimi @rodrahimi.bsky.social · 22/01/2025
Appropriate that cDC2 programs are as complex as CD4 T cells. Job security. "Current debates focus on whether the functional heterogeneity of cDC2s is shaped by ontogenically distinct subsets or by the adaptability of precursor differentiation in response to signals from the tissue." #ImmunoSky
cell.com
Type 2 conventional dendritic cell functional heterogeneity: ontogenically committed or environmentally plastic?
Conventional dendritic cells (cDCs) are sentinels of the mammalian immune system that sense a wide range of danger and homeostatic signals to induce appropriately targeted T cell immune responses. Tra...
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Elisa Rosati Scalchi @elisarosix.bsky.social · 24/12/2024
1/10 Small pre-Christmas #bluetorial on the workshop held by the T-cell Receptor (TR) and Immunoglobulin (IG) Nomenclature Sub-Committee of @iuis-online.bsky.social on policies and procedures for TR/IG gene annotation and nomenclature #immunerepertoire #immunogenetics
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Petter Brodin @petterbrodin.bsky.social · 02/01/2025
How are durable antibody-responses to vaccines induced? News & Views paper discussing excellent new work by Cortese et al in Nature Immunology: www.nature.com/articles/s41... Megakaryocytes promote long-lived plasmablasts via direct and indirect interactions. #ImmSky #HumanImmunology
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Adrian Liston @labliston.bsky.social · 04/01/2025
At @immunolcellbiol.bsky.social we now include #immunology #education articles within our scope. So if you want innovative ways to reach your students, take a look at our first special feature on the topic! onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
<em>Immunology & Cell Biology</em> | ASI Journal | Wiley Online Library
Click on the article title to read more.
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