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dave dougan

@douganlab.bsky.social
171 followers 198 following 73 posts

Regulated proteolysis | N-degron | AAA+ machines | #Proteostasis #Ndegron scholar.google.com/citations?user=6… … views my own

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dave dougan @douganlab.bsky.social · 04/08/2026
Inducible cysteine synthesis by CysK2 provides copper resistance in Mycobacterium tuberculosis | mBio journals.asm.org/doi/10.1128/...
journals.asm.org
Inducible cysteine synthesis by CysK2 provides copper resistance in Mycobacterium tuberculosis | mBio
Copper is a proposed component of the host immune response against Mycobacterium tuberculosis; thus, an understanding of how this pathogen mitigates copper stress may yield new targets for therapeutic...
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Nature Structural & Molecular Biology @natsmb.nature.com · 01/08/2026
ICYMI: New online: A coupled TOM–TIM22 supercomplex in human mitochondrial protein import
dlvr.it
A coupled TOM–TIM22 supercomplex in human mitochondrial protein import
Nature Structural & Molecular Biology, Published online: 31 July 2026; doi:10.1038/s41594-026-01852-1TOM and TIM22 complexes facilitate the transport of carrier protein substrates into mitochondria. New work shows that, in human mitochondria, these two protein complexes form transient supercomplexes to facilitate protein biogenesis.
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dave dougan @douganlab.bsky.social · 03/08/2026
An adaptor for feedback regulation of heme biosynthesis by a mitochondrial protease | Science www.science.org/doi/10.1126/...
science.org
An adaptor for feedback regulation of heme biosynthesis by a mitochondrial protease
Heme biosynthesis is tightly coordinated to support essential functions without accumulating toxic porphyrins and depleting cellular iron. Heme induces degradation of the heme biosynthetic enzyme, 5-a...
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dave dougan @douganlab.bsky.social · 27/07/2026
UTR-ly unexpected: RNA chaperones tame intrinsically disordered proteins: Cell www.cell.com/cell/fulltex...
cell.com
UTR-ly unexpected: RNA chaperones tame intrinsically disordered proteins
How do cells ensure that complex, multidomain proteins fold correctly? Luo et al. reveal a self-contained solution. The 3′UTR of an mRNA co-translationally chaperones the protein it encodes, preventin...
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dave dougan @douganlab.bsky.social · 20/07/2026
www.nature.com/articles/s41...
nature.com
A tail of two ligases - Nature Chemical Biology
Targeted protein degradation eliminates disease-driving proteins by co-opting the ubiquitin–proteasome system. Now, a single degradation tail enables a molecular glue to hijack two E3 ubiquitin ligase...
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dave dougan @douganlab.bsky.social · 11/07/2026
GID4-Recruiting PROTACs for BRD4 Degradation Overcome Resistance Driven by CRBN and VHL Deficiency pubs.acs.org/doi/10.1021/...
pubs.acs.org
GID4-Recruiting PROTACs for BRD4 Degradation Overcome Resistance Driven by CRBN and VHL Deficiency
Despite the identification of over 600 E3 ligases, current proteolysis-targeting chimeras (PROTACs) predominantly rely on CRBN and VHL. Recently, GID4, a substrate receptor of the CTLH E3 ligase compl...
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The EMBO Journal @embojournal.org · 29/06/2026
How is human mitochondrial ATP synthase assembled from 28 subunits of 17 kinds? Deleting individual subunit/assembly factor, He, Carroll, Walker et al @mrc-mbu.bsky.social show assembly proceeds via constituent structural modules that may have evolved independently link.springer.com/article/10.1...
link.springer.com
Assembly of the catalytic module and the rotor of human ATP synthase - The EMBO Journal
Human ATP synthase is a molecular rotary machine bound in inner mitochondrial membranes, built from twenty-eight subunits of seventeen kinds, two encoded in mitochondrial DNA, the remainder in nuclear...
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dave dougan @douganlab.bsky.social · 04/06/2026
www.nature.com/articles/s41...
nature.com
Stress-induced ribosome degradation in Bacillus subtilis is mediated by the RNase Y-specificity complex - Nature Communications
Transcriptional regulation is a central mechanism underlying bacterial adaptation to stress. Here, the authors used a genetic fitness screen to show that the Y-complex in Bacillus subtilis contributes...
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dave dougan @douganlab.bsky.social · 02/06/2026
Activation mechanism and structural assembly of the Mycobacterium tuberculosis ClpP1P2 protease and its associated ATPases: Cell Reports www.cell.com/cell-reports...
cell.com
Activation mechanism and structural assembly of the Mycobacterium tuberculosis ClpP1P2 protease and its associated ATPases
Weinhäupl et al. determine the cryo-EM structure of the ClpC1P1P2 complex from Mycobacterium tuberculosis, revealing an asymmetric architecture and selective activator binding. They show that molecula...
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dave dougan @douganlab.bsky.social · 18/05/2026
The N-degron pathway regulates glucose and insulin homeostasis through the lysosomal degradation of RXRA/RXRα via SQSTM1/p62: Autophagy: www.tandfonline.com/doi/abs/10.1...
tandfonline.com
The N-degron pathway regulates glucose and insulin homeostasis through the lysosomal degradation of RXRA/RXRα via SQSTM1/p62
Central to the pathogenesis of type 2 diabetes (T2D) is the failure in insulin secretion from pancreatic β-cells associated with insulin resistance. The nuclear receptor RXRA/RXRα (retinoid X recep...
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dave dougan @douganlab.bsky.social · 10/05/2026
AAA+ protein unfoldases—the Moirai of the proteome - Azinas - FEBS Letters - Wiley Online Library febs.onlinelibrary.wiley.com/doi/10.1002/...
febs.onlinelibrary.wiley.com
FEBS Press
AAA+ unfoldases are essential molecular motors that power protein degradation and disaggregation. This review integrates recent cryo-electron microscopy (cryo-EM) structures and single-molecule bioph...
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Şuayb Üstün @suaybuestuen.bsky.social · 10/05/2026
Insane. This could happen to any of us and in fact, it already has. Scientists need to stand together more visibly and raise their voices collectively. It cannot become normal that entire labs are shut down and scientific work is undermined.
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Şuayb Üstün @suaybuestuen.bsky.social · 06/05/2026
See my new post on our homepage ✍️ The journey to our newest publication on how plants cope with proteotoxic stress ♻️ www.cell.com/molecular-ce... From Doubt to Discovery: A 15-Year Journey into Proteostasis, Pathogens, and Persistence
theustunlab.com
From Doubt to Discovery: A 15-Year Journey into Proteostasis, Pathogens, and Persistence
More than 15 years ago, during my PhD, we stumbled upon something unexpected. In a yeast two-hybrid screen, bacterial effector proteins from Xanthomonas and Pseudomonas interacted with a subunit of…
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dave dougan @douganlab.bsky.social · 07/05/2026
A dynamic gateway: Uncovering the expanded human TOM complex interactome and its regulatory complexity | Science Advances www.science.org/doi/10.1126/...
science.org
A dynamic gateway: Uncovering the expanded human TOM complex interactome and its regulatory complexity
Human TOM complex was revealed as a dynamic hub, with FKBP8 as a human-specific interactor shaping biogenesis.
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dave dougan @douganlab.bsky.social · 22/04/2026
An N-degron proteolytic pathway modulates recipient susceptibility to T6SS DNase effectors
biorxiv.org
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dave dougan @douganlab.bsky.social · 14/04/2026
mtHsp70 chaperone converts mitochondrial proteostasis stress into impaired protein import | PNAS www.pnas.org/doi/full/10....
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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dave dougan @douganlab.bsky.social · 08/04/2026
A C-degron regulates Chk1 kinase by allowing stability of inactive Chk1 and by making it short- lived upon activation www.pnas.org/doi/10.1073/...
pnas.org
A C-degron regulates Chk1 kinase by allowing stability of inactive Chk1 and by making it short- lived upon activation | PNAS
The Arg/N-degron pathway of Saccharomyces cerevisiae is mediated by two interacting E3 ubiquitin ligases, Ubr1 and Ufd4. We show here that the mito...
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dave dougan @douganlab.bsky.social · 31/03/2026
Structural dynamics of the midnolin-proteasome during ubiquitin-independent substrate turnover www.nature.com/articles/s41...
nature.com
Structural dynamics of the midnolin-proteasome during ubiquitin-independent substrate turnover - Nature Communications
Proteasomes typically degrades ubiquitin-tagged proteins, but midnolin enables a distinct ubiquitin-independent pathway. Here, the authors present cryo-EM structures of the midnolin-proteasome complex...
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dave dougan @douganlab.bsky.social · 31/03/2026
NorQD AAA+ complex drives metal insertion by a twisting mechanism www.nature.com/articles/s41...
nature.com
NorQD AAA+ complex drives metal insertion by a twisting mechanism - Nature Communications
AAA+ -ATPases drive diverse molecular remodeling processes in cells. Here, the authors characterize the interaction between the NorQ ATPase and its VWA domain partner NorD, and propose a twisting mech...
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cryoEM papers @cryoempapers.bsky.social · 30/03/2026
Structural dynamics of the midnolin-proteasome during ubiquitin-independent substrate turnover pubmed.ncbi.nlm.nih.gov/41896529/ #cryoEM
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Ahmad Jomaa @jomaalab.bsky.social · 27/03/2026
Check out the final version of this work, out today! @natcomms.nature.com www.nature.com/articles/s41...
nature.com
A molecular switch in NAC prevents mitochondrial protein mistargeting by SRP - Nature Communications
How ribosome-bound NAC distinguishes mitochondrial precursors from ER clients has remained unclear. Here, authors reveal a molecular switch in NAC that limits SRP access to nascent mitochondrial precu...
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Yogesh Kulathu @kulathu.bsky.social · 27/03/2026
Registration now open! 2026 #EMBO #Ubiquitin Workshop set in stunning Monopoli, Puglia 🇮🇹 Cutting edge science, great speakers, short talk opportunities, travel awards Limited spaces. Dont miss out - register early! Registration & more info: meetings.embo.org/event/26-ubi...
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dave dougan @douganlab.bsky.social · 28/03/2026
Structure-function analysis of the bacterial ClpE/ClpP AAA+ protease - Journal of Biological Chemistry www.jbc.org/article/S002...
jbc.org
Structure-function analysis of the bacterial ClpE/ClpP AAA+ protease
General and regulatory proteolysis in bacteria is executed by a set of ATP-dependent proteases composed of hexameric ring-forming AAA+ proteins and associated peptidase barrels (e.g. ClpP). These AAA+...
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N End Rules @n-end-rules.bsky.social · 12/02/2026
Surprisingly: "Conditional stability of HY5 through the ATE N-degron pathway regulates environmental responses in Arabidopsis thaliana". The shining bounds of N-degron pathway influence expands! @charlene-kunaka.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
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giglionelab.bsky.social @giglionelab.bsky.social · 16/02/2026
Join us in Palermo! FEBS Workshop Protein Termini 2026: the power of protein termini across bacteria, plants, and animals—from ribosome biology to proteostasis and applications. Deadline: 3 March 2026 proteintermini.org/meeting #ProteinTermini #Proteostasis #FEBS #EMBO @iubmb.bsky.social
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Sjors Scheres @sjorsscheres.bsky.social · 16/02/2026
Please spread the word: the Structural Studies Division @mrclmb.bsky.social is looking for a new tenure-track, independent group leader with an exciting plan in any area of Structural (Molecular & Cell) biology, in discovery biology and/or methods development. 🥳 mrc.tal.net/vx/mobile-0/...
mrc.tal.net
Research Group Leader Tenure Track - Structural Studies - LMB 2775 - Medical Research Council
Location: Cambridge. Vacancy: Research Group Leader Tenure Track - Structural Studies - LMB 2775. Closing Date: 16/03/2026, 23:55
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paulschanda.bsky.social @paulschanda.bsky.social · 14/01/2026
📢 New preprint alert! How do proteins enter mitochondria? We uncovered a surprising mechanism at the mitochondrial entry gate—using #NMR, in vivo single-particle tracking, yeast experiments, and MD simulations to crack the code. www.biorxiv.org/content/10.6... #StructuralBiology #Mitochondria 🧵 1/8
biorxiv.org
A dynamic displacement mechanism drives protein import into mitochondria
Most mitochondrial proteins are produced in the cytosol and imported through the translocase of the outer mitochondrial membrane (TOM) to reach their final destination. Although this protein entry gat...
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David Balchin @davidbalchin.bsky.social · 19/01/2026
Our latest cotranslational folding story is now published @cp-molcell.bsky.social. Really cool (I think) new ideas about how exactly the ribosome directs folding and assembly to make sure complicated proteins mature efficiently in cells. www.cell.com/molecular-ce...
cell.com
The ribosome synchronizes folding and assembly to promote oligomeric protein biogenesis
Large oligomeric proteins constitute a major fraction of proteomes, but are difficult to refold in vitro, raising the question of how cells direct their biogenesis. Roeselová and Shivakumaraswamy et a...
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Niko Dalheimer @niko-dalheimer.bsky.social · 05/02/2026
I’m excited to share my first-author paper, with co-first author @rongqinxiaoxiao.bsky.social, now out in @nature.com. We developed a live-cell single-particle tracking platform to see how TRiC & prefoldin engage proteins during co- and post-translational folding. 1/9 www.nature.com/articles/s41...
nature.com
Single-molecule dynamics of the TRiC chaperonin system in vivo - Nature
Single-particle tracking experiments in intact cells reveal dynamic co- and post-translational interactions of the TRiC–PFD chaperonin complex with client proteins during in vivo protein folding.
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dave dougan @douganlab.bsky.social · 09/02/2026
Molecular mechanisms of mitochondrial AAA+ proteases - Journal of Biological Chemistry www.jbc.org/article/S002...
jbc.org
Molecular mechanisms of mitochondrial AAA+ proteases
Mitochondrial AAA+ proteases, LONP1, ClpXP, YME1L (i-AAA), and the m-AAA complex, maintain protein quality and shape organelle function. Growing interest in these enzymes stems from their association ...
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dave dougan @douganlab.bsky.social · 28/01/2026
Recognition of small Tim chaperones by the mitochondrial Yme1 protease onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
Recognition of small Tim chaperones by the mitochondrial Yme1 protease
Yme1 is a conserved ATP-dependent protease that maintains mitochondrial function by degrading proteins in the intermembrane space. However, how Yme1 selects substrates within the crowded mitochondria...
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dave dougan @douganlab.bsky.social · 25/01/2026
The ribosome synchronizes folding and assembly to promote oligomeric protein biogenesis www.sciencedirect.com/science/arti...
sciencedirect.com
The ribosome synchronizes folding and assembly to promote oligomeric protein biogenesis
Natural proteins often form intricate multidomain, oligomeric architectures. This presents a prima facie challenge to cellular homeostasis, as topolog…
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dave dougan @douganlab.bsky.social · 25/01/2026
A stochastic mechanism drives fast substrate translocation in the AAA+ machine ClpB www.nature.com/articles/s41...
nature.com
A stochastic mechanism drives fast substrate translocation in the AAA+ machine ClpB - Nature Communications
Cells rely on AAA+ machines to move and remodel proteins. Here, authors show that ClpB threads proteins rapidly using ATP to bias diffusive motion, revealing a fast, stochastic Brownian-motor mechanis...
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Haselbach Lab @haselbachlab.bsky.social · 21/01/2026
And another paper with contribution from us. Here Sascha Amann solved the structure of the BORC complex. Due to its shape it is extremely challenging for cryo EM analysis but still he cracked it. Read the full story spearheaded by the Huber lab in Innsbruck: www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Nature @nature.com · 21/01/2026
The US is leaving some of the world’s oldest and most influential scientific networks involved in biodiversity research, climate science and conservation go.nature.com/4a48Ney
go.nature.com
The US is quitting 66 global agencies: what does it mean for science?
The United States is leaving some of the world’s oldest and most influential scientific networks involved in biodiversity research, climate science and conservation. Affected organizations tell Nature that their work continues.
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dave dougan @douganlab.bsky.social · 20/01/2026
[476084-quiet-morning-calm].
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Aaron Whiteley @aaronwhiteley.bsky.social · 18/01/2026
I’m thrilled to share our work on phage triggers of the bacterial immune system in its final form @natmicrobiol.nature.com www.nature.com/articles/s41...
nature.com
A phage protein screen identifies triggers of the bacterial innate immune system - Nature Microbiology
A library of 400 phage protein-coding genes is used to find a trove of antiphage systems, revealing systems that target tail fibre and major capsid proteins.
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dave dougan @douganlab.bsky.social · 16/12/2025
portlandpress.com/biochemsoctr...
portlandpress.com
Regulation via compartmentation: adaptive localization of the proteasome under stress
Protein degradation by the ubiquitin-proteasome system and autophagy are essential mechanisms that are involved in virtually all cellular activities, and their inadequate function was shown to underli...
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The Science of Parkinson's @scienceofpd.bsky.social · 02/12/2025
Using complexes obtained through PINK1 pulldown, researchers determine the cryo-EM structures of the human Hsp90-Cdc37-PINK1 complex at 2.84 Å, Hsp90-FKBP51-PINK1 at approximately 6 Å, & Hsp90- PINK1 at 2.98 Å www.nature.com/articles/s41...
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David Pocock @davidpocock.bsky.social · 19/11/2025
Save the CSIRO Our national science & research agency is now facing more job cuts than under Tony Abbott Call on the Albanese Govt to fund the scientists & research we need to tackle big issues we face from climate to food security and everything in between www.davidpocock.com.au/save_our_csiro
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Nick Feik @nickfeik.bsky.social · 26/11/2025
Add this to the CSIRO cuts and uni cuts generally and the picture is unmistakable
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Waggoner Lab @labwaggoner.bsky.social · 26/11/2025
We are all mosaics: vast genetic diversity found between cells in a single person @nature.com www.nature.com/articles/d41... @biorxivpreprint.bsky.social ⁦@mayoclinic.org @harvardmed.bsky.social @timcoorens.bsky.social @emblebi.bsky.social www.biorxiv.org/content/10.1...
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Waggoner Lab @labwaggoner.bsky.social · 26/11/2025
A triple-action PROTAC for wild-type p53 cancer therapy @cp-cellrepmed.bsky.social @lorenwalensky.bsky.social @danafarber.bsky.social www.cell.com/cell-reports...
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Isa Manrique @isamanrique.bsky.social · 23/11/2025
🏔️🌧️ 🧬 We wrote this Expert View on oxygen sensing, you can read it here! 👇🏼
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Beckmann Lab @beckmannlab.bsky.social · 23/11/2025
How does the kinase ZAK sense ribosome collisions? Find out in our latest collaboration with the @greenlab.bsky.social @doubleshuang.bsky.social @Vienna Huso: 1/4 rdcu.be/eRmJl #ribosome #cryoEM #LMU #JHMI
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Monte Rosa Therapeutics @monterosatx.com · 19/11/2025
Through proteomic profiling of our proprietary compound library, our team identified a selective, fast, and potent molecular glue degrader that induces cereblon degradation via a novel mechanism. Read the full paper in @natcomms.nature.com: rdcu.be/eQKQk
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cryoEM papers @cryoempapers.bsky.social · 14/11/2025
Structural basis for co-translational assembly of homo-oligomeric proteins www.biorxiv.org/content/10.1101/2025.11.12.687954v1 #cryoEM
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Trends in Biochemical Sciences @cp-trendsbiochem.bsky.social · 18/11/2025
📝 Online now - the Spotlight "Unlocking the protein code: how our organs age across a lifetime" from Dongxue Wang and Jing Yang. #Proteostasis #Aging #BiologicalClocks #Proteomics Read it here: authors.elsevier.com/a/1m7Ts3S6Gf...
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dave dougan @douganlab.bsky.social · 18/11/2025
Ribonuclease toxin RelE1 inhibits growth of Mycobacterium tuberculosis through specific cleavage of the ribosomal anti-Shine–Dalgarno region: academic.oup.com/nar/article/...
academic.oup.com
Validate User
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dave dougan @douganlab.bsky.social · 18/11/2025
Development of a targeted BioPROTAC degrader selective for misfolded SOD1 www.nature.com/articles/s41...
nature.com
Development of a targeted BioPROTAC degrader selective for misfolded SOD1 - Nature Communications
Conventional PROTACs have limited capacity for misfolded proteins. Here, authors develop a BioPROTAC containing an scFv specifically targeting misfolded SOD1, fused to an E3 ligase, and demonstrate a ...
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