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Dena Goldblatt

@denagoldblatt.bsky.social
1.7K followers 1.9K following 35 posts

Postdoc at NINDS. Interests in spinal circuit assembly & function, neuro-evo-devo. 🐟—>🐭. Prev. Brandeis, NYU Neuro, DSPAN fellow

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Dena Goldblatt @denagoldblatt.bsky.social · 24/08/2026
Bsky hivemind: what are we liking for Xenium cell type classifiers these days? Have tried RCTD, tangram, and label transfer. 50% of the dataset is easy to classify, but wildly different results across classifiers for the other 50%. +1 if anyone’s specifically fought with spinal cord data. Thx!
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Maria Antonietta Tosches @matosches.bsky.social · 27/07/2026
Excited to share a new preprint from the lab, by @andrewmatheson.bsky.social and team, where we dive into the superpower of newts: plasticity! www.biorxiv.org/content/10.6... Like many good projects, this started with a serendipitous observation... 🧵1/5
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Alex Eve @amjeve.uk · 24/07/2026
Neuronal circuits are assembled using a repertoire of different chemical and electrical synapses, with the latter connecting the cytoplasm between two neurons. Anne Martin asks how this complex process develops, finding proteins that bridge both synapse types. #2026SDB Preprint⤵️
biorxiv.org
Electrical synapse molecular diversity revealed by proximity-based proteomic discovery
Neuronal circuits are composed of synapses that are either chemical, where signals are transmitted via neurotransmitter release and reception, or electrical, where signals pass directly through intern...
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Biodiversity Pics @biodiversitypix.bsky.social · 01/07/2026
🐐 Poissons, ecrevisses et crabes, de diverses couleurs et figures extraordinaires, . A Amsterdam, Chez Reinier & Josué Ottens, 1754.. [Source]
Historical illustration displaying seven colorfully detailed aquatic creatures including fish, a shrimp, and a crab, each labeled with French names and numbers. The fish have striped, vibrant patterns in yellows, pinks, greens, and blues, featuring prominent fins and coral-like textures. The shrimp illustrations show segmented bodies with extended antennae and legs, colored in pink and blue hues. The crab has a rounded body with multiple legs and pincers, painted in shades of yellow, blue, and orange. The drawing style is scientific yet artistic, printed with fine lines and soft color fills. Despite the "goat" keyword, the image depicts marine animals with no goat reference.
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c0nc0rdance @c0nc0rdance.bsky.social · 12/06/2026
Want to hear something freaky? If a deer gets a cut on its antlers while it's still in velvet, the next year when the deer grows a completely NEW rack, it will often grow an extra branch in the exact spot of the cut. Let's talk about TROPHIC MEMORY, the weird way cells (may) remember each other.
static.klipy.com
Majestic Deer with Huge Velvet Antlers
Alt: Majestic Deer with Huge Velvet Antlers. To be clear, this is probably a genetic event or even a breeding decision, but it illustrates the strange ways that antlers can grow. This poor buck, I'm assuming probably a white tailed deer, looks a bit overwhelmed to have a monstrous rack.
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James McInerney @jomcinerney.bsky.social · 09/06/2026
I'm mostly doing "Slow Reads" over on substack (it's always free), so you might get through a cup of coffee reading this one. Make sure you read to the end. profmcinerney.substack.com/p/good-enough
profmcinerney.substack.com
Good enough
What we have learned from absurd evolution
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MwahahahahahadScientist @mads100tist.bsky.social · 07/06/2026
ZebrafishRock @zebrafishrock.bsky.social over ten years and going strong 🧪🐟
I LIKE Fish AND ME AND MY FRIENDS LOOK AT fish ALL THE TIME AND SOMETIMES THE fish ARE NEAT AND WE TELL OUR OTHER FRIENDS ABOUT IT AND OUR FRIENDS ALSO LIKE fish AND SOMETIMES WE HAVE fish PARTIES AND SO NOW WE KNOW A LOT ABOUT fish.

The life of a scientist sounds way more fun when you describe it like you're six years old
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Ariel Levine @ariellevine.bsky.social · 21/04/2026
📣 Exciting news: my lab is moving to the Krembil Institute at the University of Toronto’s University Health Network in Fall 2026. We’ll be recruiting for all roles, so reach out if you’re interesting in joining us to study spinal circuits for sensorimotor control www.levine-lab.org
levine-lab.org
Home | Levine Lab
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Zebrafish Rock! @zebrafishrock.bsky.social · 12/04/2026
In vivo imaging of zebrafish spinal cord neural circuit development, captured with adaptive optical lattice light-sheet microscopy. Credit to Eric Betzig @hhmijanelia.bsky.social. #ZebrafishZunday 🧪
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David Schoppik @schoppik.com · 08/04/2026
Our new work goes from genes to behavior to understand the molecular underpinnings of the most common childhood disorder of vision: strabismus. Led by UCSF-bound Emily Gershowitz & Kyla Hamling, plus rockstars @denagoldblatt.bsky.social & @paigel.bsky.social www.biorxiv.org/content/10.6...
A graph of eye velocity versus time that establishes that fish with loss of function mutations in the phox2a gene can't move their eyes when tilted.An image showing expression of a particular gene in the motor neurons that move the eyes. Black spots show where the gene is expressed, dotted lines outline the cranial motor nucleus nIV that contains motor neurons that move the eyes upThe top shows a schematic of a fish with motor neurons marked in green and a pipette used to suction motor neurons for later analysis. The bottom left shows white dots that mark each motor neuron; the bottom right shows no white dots to indicate the motor neurons had been selectively removed for later analysis.
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John Tuthill @tuthill.bsky.social · 24/03/2026
🧵 New preprint led by @bingbrunton.bsky.social, @elliottabe.bsky.social, @lawrencehu.bsky.social We gave a worm brain control of a fly body and it walked What did we learn? Nothing, other than deep reinforcement learning is effective We call it the digital sphinx www.biorxiv.org/content/10.6...
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Fabricio Nicola @fabricionicola.bsky.social · 14/03/2026
Mammals have hundreds of joints and muscles. Controlling them individually would be nearly impossible. How does the nervous system organize such complexity into coherent actions? Our new study explores this question through a natural behavior: jumping.
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Ariel Levine @ariellevine.bsky.social · 15/03/2026
Check out the newest work from our, from Fabricio Nicola @fabricionicola.bsky.social on mouse jumping and spinal cell types. Excellent collab with @vulcnethologist.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
A spinal substrate for modular control of natural behavior
Natural behavior unfolds as coordinated sequences of body movements. This organization suggests that behavior may be built from discrete motor patterns, yet how such arrangements are implemented by neural circuits remains unknown. Here, we combined kinematic analysis, muscle recordings, genetically identified cell types, and closed-loop optogenetic perturbations to examine the organizational logic of natural gap-crossing jumps in mice. Jumping was characterized by a series of precisely defined phases and their associated modular motor patterns. The core phases, propulsion and flight, exhibited distinct signatures of neural control, including unique bursts of coordinated hindlimb muscle activity, differential tuning strategies for jump distance, and active requirements for spinal neural drive. Mapping activity across lumbar interneuron populations and functionally screening candidate cell types for their ability to drive coordinated movement revealed that a population of dorsal excitatory dILB6 neurons can autonomously evoke coordinated multi-joint hindlimb flexion characteristic of the jumping flight phase, across behavioral contexts. These findings provide a specific cellular substrate for the long-standing concept of spinal modular motor control: a flexible, preconfigured motor template that the mammalian CNS can recruit and modulate to meet the demands of natural behavior. ### Competing Interest Statement The authors have declared no competing interest. Intramural Research Program of the National Institutes of Health (NIH)
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Dena Goldblatt @denagoldblatt.bsky.social · 19/02/2026
This one is extra special: my rockstar former UG (now MD-PhD!) Stephanie's first 1st author paper, and my first as senior author, is now out in Development!
journals.biologists.com
Birthdate aligns vestibular sensory neurons with central and motor partners across a sensorimotor reflex circuit for gaze stabilization
Highlighted Article: Circuit nodes often develop along common axes. We find that a ‘first-come, first-served’ temporal rule underscores the organization of a canonical sensorimotor circuit for gaze st...
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Portugues Lab @portugueslab.bsky.social · 07/01/2026
1/6: New publication from the lab: “Plastic landmark anchoring in zebrafish compass neurons” by Ryosuke Tanaka (@ryosuketanaka.bsky.social) and Ruben is available here: rdcu.be/eX1L4
rdcu.be
Plastic landmark anchoring in zebrafish compass neurons
Nature - Using two-photon microscopy with a panoramic virtual reality setup, how head direction cells in larval zebrafish integrate visual landmarks and optic flow to track orientation is revealed.
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Nature @nature.com · 21/11/2025
Nature research paper: Rewiring an olfactory circuit by altering cell-surface combinatorial code go.nature.com/3MbCoZT
go.nature.com
Rewiring an olfactory circuit by altering cell-surface combinatorial code - Nature
In Drosophila, changing the expression of a small set of cell-surface proteins in just one type of olfactory neuron rewires its connections almost entirely to a new postsynaptic partner neuron type, altering the fly’s odour response and courtship behaviour.
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Yunlu Zhu @yunluzhu.bsky.social · 19/11/2025
Excited to share this work where we found how fish swim differently to keep balance in the dark / explore more in the light. Spoiler: ever wonder what they do during “little pauses” between swims? They are counting!
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Kevin Thiessen, PhD @kevinthiessen.bsky.social · 02/11/2025
I've updated my Bioinformatics Bootcamp: Zebrafish Special Edition blog post on @the-node.bsky.social! Please do share with trainees or anyone new to the community. I hope it adds some breadth to the many resources available to #zebrafish researchers. 🔗 thenode.biologists.com/bioinformati...
thenode.biologists.com
Bioinformatics Bootcamp - Zebrafish Special Edition - the Node
A deep-dive into the many cool (and free) resources available to zebrafish researchers! Disclaimer: This is not a comprehensive list but a list of useful
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David Schoppik @schoppik.com · 02/11/2025
Thread coming soon, but be the first to read the latest from @franziau.bsky.social!
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Isaac Bianco @isaacbianco.bsky.social · 23/08/2025
Latest from the lab. Beautiful work from Joanna Lau and a fantastic collaboration with James Fitzgerald. www.cell.com/current-biol...
cell.com
Supraspinal commands have a modular organization that is behavioral context specific
Lau et al. use calcium imaging and statistical modeling to comprehensively survey reticulospinal activity during diverse locomotor behaviors. They find that a small set of functional modules act combi...
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Sara McArdle @saramcardle.bsky.social · 07/08/2025
I got this in my head and I couldn't focus on work until it existed. Microscopy image file alignment chart, based on how I feel if you give me an image to analyze:
D&D style alignment chart for microscopy images.

Lawful good: .ome.tiff
Lawful neutral: .png
Lawful evil: .jpg
Neutral Good: .tiff
Neutral: .pdf
Neutral Evil: .mrxs
Chaotic Good: .h5
Chaotic Neutral: .ppt
Chaortic Evil: .jpg.avi.tiff
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Dr. Kakani Katija @kakanikatija.bsky.social · 07/08/2025
Excited to share that our manuscript "In situ lightfield imaging of octopus locomotion reveals simplified control" has been published in @nature.com. www.nature.com/articles/s41... If you love 🧪🌎🦑🌊, keep reading this thread! 1/n
MBARI’s innovative EyeRIS camera system collects near real-time three-dimensional visual data about the structure and biomechanics of marine life. Filming deep-sea pearl octopus (Muusoctopus robustus) with this system has provided new insight into octopus locomotion that can contribute to the design of bioinspired robots in the future. Image credit: MBARI
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MwahahahahahadScientist @mads100tist.bsky.social · 05/08/2025
In case you've ever wondered, I talked with @amjeve.bsky.social about science, myself, and the future of #DevBio as part of the Pathway to Independence Fellowship @biologists.bsky.social 🧪 journals.biologists.com/dev/article/...
journals.biologists.com
Pathway to Independence – an interview with Joaquín Navajas Acedo
Joaquín Navajas Acedo is a Postdoc in the lab of Dr Alexander Schier in Biozentrum at the University of Basel, Switzerland. He is interested in how the nervous system evolves and develops at the singl...
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Ralph Emilio Peterson @ralphpeterson.bsky.social · 25/07/2025
New preprint!

 tl;dr — We ran around late at night to record wild rats in NYC and figured out how to quantify their behavior and environment. 🧵 w/ Dima Batenkov, @zamakany.bsky.social, Emily Mackevicius www.biorxiv.org/content/10.1...
biorxiv.org
Computational Urban Ecology of New York City Rats
Urban rats are highly adaptable, thriving in the dynamic and often inhospitable conditions of modern cities. Despite substantial mitigation efforts, they remain an enduring presence in urban environme...
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Dena Goldblatt @denagoldblatt.bsky.social · 17/07/2025
Incredible — close enough to see, too far away to hear… @capitalweather.bsky.social from Bethesda
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Randall Munroe @xkcd.com · 12/06/2025
Good Science xkcd.com/3101/
5-panel comic. (1) [teacher with long hair next to whiteboard] TEACHER: I’m supposed to give you the tools to do good science. (2) [teacher addressing students] But what *are* those tools? Methodology is hard and there are so many ways to get incorrect results. What is the magic ingredient that makes for good science? (3) TEACHER: To figure it out, I ran a regression with all the factors people say are important: [embedded list in sub-panel, cut off at end] Outcome variable: correct scientific results. Predictors: collaboration; skepticism of others’ claims; questioning your own beliefs; trying to falsify hypotheses; checking citations; statistical rigor; blinded analysis; financial disclosure; open data (4) TEACHER: The regression says two ingredients are the most crucial: 1) genuine curiosity about the answer to a question, and 2) ammonium hydroxide. (5) STUDENT: Wait, why did *ammonia* score so high? How did it even get on the list? LONG HAIR: ...And now you’re doing good science!
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Dena Goldblatt @denagoldblatt.bsky.social · 04/06/2025
Meanwhile, in RI: “Well you drive past the big blue bug and the old Apex building and then turn left at the Dunkin…”
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Lilah Sturges @lilahsturges.com · 03/06/2025
Are all muppets the same species just with wildly different phenotypes like dogs or are there a lot of different species of muppet
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Dena Goldblatt @denagoldblatt.bsky.social · 26/05/2025
Hooding day for @ericfranklin.bsky.social !!!!!!
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Daniel Cardoso Llach @dcardo.bsky.social · 16/05/2025
I was today years old when I learned that the Magic Schoolbus was an NSF-funded project.
Image of the TV series The Magic School Bus accompanied by the following text: Airing on PBS in the mid-1990s, this NSF-funded animated TV show follows Ms. Frizzle and her class as they set off on field trips out of this world, including careening across the solar system, traveling through the human body or visiting the late Cretaceous period.
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Kevin Thiessen, PhD @kevinthiessen.bsky.social · 17/05/2025
Cross-posting from LinkedIn: www.linkedin.com/posts/kevin-... These are useful (and free!) websites that I found in my search for all things #zebrafish as part of my Bioinformatics Bootcamp. If there’s enough interest, I may do a blog post on the Node. Enjoy!
linkedin.com
#zebrafish | Kevin Thiessen, Ph.D.
A while back, I put together a Bioinformatics Bootcamp for #zebrafish researchers. Here are some of the helpful links & resources that I've come across in my search: Disclaimer: This is not a...
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samuel mehr @mehr.nz · 15/05/2025
PI: "this draft is so great, why didn't we write it this way in the first place??" PhD student: "I did, and then you told me to change it"
HBO max logo evolution
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Kate Starbird @katestarbird.bsky.social · 09/05/2025
When I read ideas about ChatGPT as a replacement for writing, I immediately go to Weick’s explanation of the old adage, “How do I know what I think, until I see what I say?” If it replaces or profoundly shapes the writing process, then it changes the thinking process… which will align w/ its outputs
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Alexandre Dumoulin @axonsalex.bsky.social · 30/04/2025
This time-lapse captures 17 hours of axonal growth from a chicken dorsal root ganglion explant, visualized through the actin cytoskeleton using live confocal imaging. I just submitted this video to the Nikon Small World in Motion competition. Today is the last day to upload yours! 😉 🧪
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Brian Grubb @briancgrubb.bsky.social · 30/04/2025
one of the healthier ways I’ve been managing stress lately is to bottle up all of my rage and anxiety during the day and channel it into watching a baseball game the goddamn Phillies try to lose at 10pm on a weeknight
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Seth Blackshaw @sethblackshaw.bsky.social · 29/04/2025
Our latest manuscript (7 years in the works) tackles the question of how diurnal ground squirrels evolved a cone-dominant retina, in contrast to the ancestral rod-dominant retina retained by virtually all other mammals./1 www.biorxiv.org/content/10.1...
biorxiv.org
Heterochronic transcription factor expression drives cone-dominant retina development in 13-lined ground squirrels.
Evolutionary adaptation to diurnal vision in ground squirrels has led to the development of a cone-dominant retina, in stark contrast to the rod-dominant retinas of most mammals. The molecular mechani...
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Alex Chesler @alexchesler.bsky.social · 23/04/2025
An example of what we in the NIH Intramural program can accomplish. Excited to share our latest paper in close collaboration with Nick Ryba's group. We examined how inflammation transforms representation in somatosensory neurons to cause pain. Lots of surprises here: www.nature.com/articles/s41...
nature.com
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Katherine W. Rogers @katwrog.bsky.social · 21/04/2025
Happy to share a new preprint from my lab! We characterize the on/off kinetics, light dosage-dependence, and more for a suite of optogenetic signaling activators in zebrafish embryos 💡 www.biorxiv.org/content/10.1...
biorxiv.org
An optogenetic toolkit for robust activation of FGF, BMP, and Nodal signaling in zebrafish
Cell signaling regulates a wide range of biological processes including development, homeostasis, and disease. Accessible technologies to precisely manipulate signaling have important applications in ...
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Shawn Burgess @burgesslab.bsky.social · 15/04/2025
It has been a while since I advertised some of the tools we have released to help researchers analyze the zebrafish genome. So a brief Bluetorial on our zebrafish genomics UCSC public data hub and the bigger effort led by @ferencmueller.bsky.social to create a zebrafish ENCODE project (Danio-CODE):
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Dena Goldblatt @denagoldblatt.bsky.social · 04/04/2025
So much joy: my incredible undergrad Marlyn Li from @schoppik.com’s lab is a Goldwater Scholar!!! Check out her profile here 👇 and keep an eye out — she’s applying for MD-PhD programs soon 👀 as.nyu.edu/features/imp... #zebrafish #devbio 🧠
as.nyu.edu
Goldwater Scholar 2025
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Christophe 🔬 Leterrier @christlet.bsky.social · 04/04/2025
Stepwise photobleaching of the economy
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Portugues Lab @portugueslab.bsky.social · 02/04/2025
3/3 We are looking for a lab technician, a lab manager and researchers to join us in this new chapter. Read the post here: portugueslab.com/the-lab-is-h... Reach out to us if you are interested.
portugueslab.com
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Merlin Lange @merlinlange.bsky.social · 22/03/2025
Zoom-in on zebrafish head development captured with a light-sheet microscope. 🧪 #zebrafish #AcademicSky #DevBio #neuroskyence
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Rory Cooper @rorylcooper.bsky.social · 21/03/2025
Check out these feather buds on the chicken embryo's wing! Our latest study @plosbiology.org reveals that temporary inhibition of sonic hedgehog signalling transforms feathers into simple, protofeather-like structures—similar to those of their dinosaur ancestors🔬🦖🧪 journals.plos.org/plosbiology/...
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Randall Munroe @xkcd.com · 17/03/2025
Lungfish xkcd.com/3064
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R. Brian Roome @rbrianroome.bsky.social · 17/03/2025
Check out my postdoc work at Ariel Levine’s lab, hot and fresh, describing how you build a dorsal horn! www.biorxiv.org/content/10.1...
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c0nc0rdance @c0nc0rdance.bsky.social · 16/03/2025
Benjamin Barti at the Hungarian Academy of Sciences - IEM, took this 20X micrograph by confocal microscopy for Nikon's 2018 Photomicrography Competition. You're seeing dye-injected Purkinje cells in a mouse cerebellum. These are some of the largest neurons in the brain.
Description:  It's a microscopic image of a type of red-stained neuron in the cerebellum, and it looks like some sort of undersea coral structure waving in the water, with a long thin line stretching "down".  The rest of the tissue on the slide is either beige or outlined in blue, long thin dendrites or descending fibers, I think?  Not great at neurobiology.

Image of Distinction, 2018 Photomicrography Competition
"Dye-injected Purkinje cells in mouse cerebellum"
CREDIT:  Benjamin Barti
Affiliation:  Hungarian Academy of Sciences - Institute of Experimental Medicine, Department of Molecular Neurobiology, Budapest, Hungary
Technique:  Confocal, Magnification 20x (objective lens magnification)
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Dena Goldblatt @denagoldblatt.bsky.social · 11/03/2025
much needed glimmers!
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Zebrafish Rock! @zebrafishrock.bsky.social · 08/03/2025
Celebrate International Women’s Day by following our two Starter Packs with kickass Scientists from the #zebrafish community! 👩‍🔬 🧪 Volume 1: go.bsky.app/4BegEjv Volume 2: go.bsky.app/VoebYrt
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