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Adrià Sogues

@adriasogues.bsky.social
438 followers 244 following 39 posts

Structural Microbiologist CNRS permanent researcher at the Institut Pasteur (Paris) Passionate about spores, S-layers, cell envelope & cell division. Former postdoc at VIB-VUB in Brussels (EMBO & MSCA fellow) 🇪🇺🇫🇷🇧🇪🇪🇸🏳️‍🌈

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Reposted by Adrià Sogues
Pride in Microbiology @prideinmicro.bsky.social · 01/10/2026
Please join us for our 2026 LGBTQIA+ STEM Day Symposium! Registration form: forms.gle/VyXy4WXmr96B...
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Tanmay Bharat @tbharat-lab.bsky.social · 30/09/2026
Diverse S-layer anchoring mechanisms create an epiplasmic space in prokaryotic cell envelopes. Our review with @bupbuse.bsky.social and @vikramalva.bsky.social discussing a cellular compartment created by the S-layer out in Current Opinion in Microbiology. www.sciencedirect.com/science/arti...
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Nika Pende @nikapende.bsky.social · 23/09/2026
So happy to see this paper finally out 🥳 it took only seven years after the first purification of archaeal peptidoglycan 🤣 Congrats to all the people involved 🥂🍾 And here is the story behind the paper: communities.springernature.com/posts/cracki...
communities.springernature.com
Cracking the Archaeal Cell Wall: How a hydrolase overturned a 50-year-old paradigm
Using bioinformatics, biochemistry, NMR, as well as the newly characterized enzyme ArmA from methanogenic archaea, we revised the existing knowledge on archaeal peptidoglycan structure. At the same ti...
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Adrià Sogues @adriasogues.bsky.social · 25/08/2026
Wouldn’t miss this conference for anything! Looking forward to it!
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Adrià Sogues @adriasogues.bsky.social · 24/08/2026
I mean… look at this awesome S-layer structure 🤯 How cool is it?! Congratulations to all the authors!! 🎉
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Adrià Sogues @adriasogues.bsky.social · 24/08/2026
My latest publication with the @remaut-lab.bsky.social is out! We wrote a review about Structure and Function of S-layers in G+ bacteria. Enjoy the read! :) www.sciencedirect.com/science/arti...
sciencedirect.com
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Félix Ramos-León @felixrl.bsky.social · 18/08/2026
Excited to share my latest work in the @ramamurthilab.bsky.social, now in @cp-cellreports.bsky.social! We show that division geometry organizes surface adhesins in S. aureus and enables the formation of abscess communities that protect bacteria from immune cells. www.cell.com/cell-reports...
cell.com
Orthogonal cell division mediated by PcdA organizes surface virulence factors to drive staphylococcal abscess community formation
Staphylococcus aureus divides along sequential orthogonal planes, but the function of this geometry has remained unclear. Ramos-León et al. show that orthogonal division promotes uniform deployment of...
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Reposted by Adrià Sogues
Carballido-López's lab @carballido-lab.bsky.social · 27/07/2026
And two more pre-prints from the lab, focusing on MreB polymerization cycle and dynamics! www.biorxiv.org/content/10.6... www.biorxiv.org/content/10.6...
biorxiv.org
A genetic screen unveils the polymerization cycle of the bacterial actin-like MreB
MreB, a bacterial actin homologue that organizes cell wall synthesis in most rod-shaped bacteria, assembles into membrane-associated filaments through mechanisms that have remained elusive despite dec...
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Adrià Sogues @adriasogues.bsky.social · 23/07/2026
It’s finally official!! 🤩 Starting in October, I’ll be joining the @cnrs.fr as a permanent researcher, working at the @pasteur.fr in the BCCM unit. Thanks to everyone who supported me and I can’t wait to get started on this next chapter!
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Géraldine Laloux @lalouxlab.bsky.social · 09/07/2026
New preprint! We show that the bacterial predator B. bacteriovorus deploys a unipolar Tad nanomachine for irreversible attachment to prey and invasion. @coralietesseur.bsky.social used CRISPRi+microfluidics to overcome barriers associated with essential systems in an obligate predatory lifestyle 🦠
biorxiv.org
A polarity-controlled Tad nanomachine enables prey invasion in a bacterial predator
Type IV pili are dynamic surface appendages assembled by envelope-spanning nanomachines that mediate diverse bacterial interactions, yet how these systems are adapted to predatory lifestyles remains p...
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Adrià Sogues @adriasogues.bsky.social · 18/06/2026
Meet AbpX, a biomatrix protein from the hyperthermophile Pyrodictium abyssi. It forms Ca²⁺-triggered fibrils via donor strand complementation. Using cryo-EM + X-ray, we built a full lattice model and place AbpX in a new TasA superfamily clade. A very nice collaborative project! tinyurl.com/mryzcz4n
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Adrià Sogues @adriasogues.bsky.social · 27/04/2026
This one deserves it🤩! We used cryo‑EM to identify a new “sporesilk” in Bacillus thuringiensis. The fiber, called A‑ENA, forms an incredibly stable covalent network that increases virulence by keeping the toxic payload and spores in a biofilm-like structure. www.nature.com/articles/s41...
nature.com
Auto-crosslinking sporesilk fibers promote endospore and Cry toxin clustering - Nature Communications
Authors reveal that protein nanofibrils govern assembly of bacterial spores and extrasporal toxins into insecticidal aggregates. Spores and parasporal bodies are incased in a “sporesilk” matrix that d...
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Reposted by Adrià Sogues
Nature Microbiology @natmicrobiol.nature.com · 07/04/2026
Out Now! Local peptidoglycan composition defines division site selection in Streptococcus pneumoniae #MicroSky
go.nature.com
Local peptidoglycan composition defines division site selection in Streptococcus pneumoniae
Nature Microbiology, Published online: 07 April 2026; doi:10.1038/s41564-026-02322-6Sequential peptidoglycan carboxylase activity of DacA and DacB generates a local peptidoglycan signature that recruits MapZ and establishes the division site at the Streptococcus pneumoniae cell equator.
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Institut Pasteur | 130 years of biomedical research @pasteur.fr · 23/03/2026
🧬 EMBO Workshop – The complexity of mycobacterial infections: from research to real-world impact 📅 14–18 Sept 2026, Paris Tuberculosis & non-tuberculous mycobacteria at the heart of discussions: evolution, host–pathogen interactions, drug resistance. 🔗 meetings.embo.org/event/26-myc...
Tuberculosis (TB), caused by Mycobacterium tuberculosis, remains one of the deadliest infectious diseases worldwide. Meanwhile, non-tuberculous mycobacteria (NTM) are an increasing global health concern. NTM infections often resemble TB clinically, which can lead to misdiagnosis and inappropriate therapy. Additionally, drug-resistant strains of M. tuberculosis and NTM exacerbate the global antimicrobial resistance crisis. A better understanding of the biology of mycobacterial pathogens and of the mechanisms underlying disease pathogenesis and transmission is critical to reduce their burden worldwide.

This EMBO Workshop is the fourth in a successful series held at the Institut Pasteur in Paris, following the meetings organized in 2012, 2016, and 2022. It will bring together scientists, clinicians, public health experts, and representatives from industry and non-profit organizations, who will share recent insights into mycobacterial infections, from fundamental discoveries to translational research, and their practical implications. The program will cover mycobacterial evolution, physiology, metabolism, host–pathogen interactions, immune responses, mechanisms of drug evasion, therapeutic strategies, vaccines, and diagnostics. Emerging experimental models, computational approaches, and artificial intelligence will also be addressed, showing how recent technologies contribute to advancing mycobacterial research and interventions.
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i2bcparissaclay.bsky.social @i2bcparissaclay.bsky.social · 17/03/2026
We are looking for outstanding scientists to develop ambitious research programs in molecular and cellular biology, with special interest in multidisciplinary projects and computational biology.More info: www.i2bc.paris-saclay.fr #MolecularBiology #CellBiology #ComputationalBiology #TeamLeaders#I2BC
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Félix Ramos-León @felixrl.bsky.social · 13/03/2026
Our recent work is now available in bioRXIV!
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Adrià Sogues @adriasogues.bsky.social · 09/03/2026
Great science, nice environment and a very exciting project!! Highly recommended! 👇
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Séamus Holden 🔬🦠🧫 @seamusholden.bsky.social · 26/01/2026
SAVE THE DATE! The next instalment of the long-running Bacterial and Archaeal Cell Division Conference will take place at www.marriott.com/en-us/hotels..., Italy from the 20th to 23rd of April 2027. Organisers: me, @s-lab.bsky.social, @awehenkel.bsky.social. More info soon. #MicroSky
marriott.com
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Adrià Sogues @adriasogues.bsky.social · 06/01/2026
Preprint out! That was a really enjoyable collaboration! We report the structure and higher-order assembly of AbpX, a biofilm component in Archaea. And as a bonus, this protein gave me one of the most beautiful crystals I’ve ever had! 🤩💎
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Kate Beckham @kshbeckham.bsky.social · 14/12/2025
www.nature.com/articles/s41...
nature.com
AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination - Nature Methods
An analysis of AlphaFold protein structure predictions shows that while in many cases the predictions are highly accurate, there are also many instances where the predicted structures or parts of pred...
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Géraldine Laloux @lalouxlab.bsky.social · 20/11/2025
Apply now to attend the next EMBO Bacterial Networks meeting #EMBOBacNet 🗓️13-18 September 2026 📍Sant Feliu de Guixols, Spain 📝Program and registration info: meetings.embo.org/event/26-bac... 👩‍🔬Organised with co-chair @s-lab.bsky.social and ECR @coralietesseur.bsky.social #MicroSky
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Adrià Sogues @adriasogues.bsky.social · 13/11/2025
S-layer, a (re)blooming field and a fascinating world for both microbiologists and structural biologists. A very complete and up-to-date review of S-layer functions, structure, and biogenesis. Congrats to all the authors!
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Ricardo Henriques @henriqueslab.bsky.social · 22/10/2025
🦠🔬🤖🧑‍💻 #mAIcrobe is out! With @pinholab.bsky.social's lab, we launched an open-source framework for high-throughput bacterial image analysis. By rockstars A. Brito & B. Saraiva et al, making #DeepLearning for phenotyping accessible! Easy to use, plus model training 📜 www.biorxiv.org/content/10.1...
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Adrià Sogues @adriasogues.bsky.social · 18/10/2025
The line-up I would dream of 🤩
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Institut Pasteur Education @pasteuredu.bsky.social · 15/10/2025
Cryo-Flow : when science freezes and flows ❄️ After turning her thesis on tuberculosis into a rap, Yaëlle Wormser aka Lady Pipette, doctoral student at the Institut Pasteur, is back with a new track — Cryo-Flow — a song that turns Cryo-Electron Microscopy (Cryo-EM) into rhythm & rhyme. @pasteur.fr
youtube.com
Cryo-Flow : when science freezes and flows ❄️
YouTube video by Institut Pasteur EDUCATION
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Yoann Santin @ysantin.bsky.social · 18/09/2025
CRISPRi on #Bdellovibrio to study essential genes 🤗🤩 #MicroSky
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Adrià Sogues @adriasogues.bsky.social · 18/09/2025
A new chapter begins! Happy to be back at the @pasteur.fr , a place that feels like home. Excited for the journey ahead and all the science to come!
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Institut Pasteur | 130 years of biomedical research @pasteur.fr · 01/09/2025
🎓 Applications for Institut Pasteur's PhD programs open Sept 1-Oct 20, 2025 for October 2026 entry. Apply to up to 4 projects across 6 programs: PPU, PPU-IMAGINE @institutimagine.bsky.social, PPU-@ox.ac.uk, PPU-EID @upcite.bsky.social & more 🧬 Register now ✍️ www.pasteur.fr/en/education...
Pasteur-Paris University International Doctoral Programme, The call for enrollment of students in October 2026 will be open from September 1st to October 20th, 2025
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Adrià Sogues @adriasogues.bsky.social · 17/08/2025
Many spores from the Firmicutes group are decorated with hair-like structures. Since the 60s, they remained a mystery. @remaut-lab.bsky.social named these fibres ENdospore Appendages (ENAs). Using Cryo-ID, we report the identity, structure and function of F-ENA. www.nature.com/articles/s41...
nature.com
Cryo-EM identifies F-ENA of Bacillus thuringiensis as a widespread family of endospore appendages across Firmicutes - Nature Communications
B. thuringiensis spores contain uncharacterized protein filaments that extend from the surface of the exosporium. Here, the authors show that these filaments feature conserved β-barrel neck domains an...
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Saravanan Palani @syncellbiolab.bsky.social · 08/08/2025
Thrilled to see our work published in @embojournal.org #asgard #archaea #cytoskeleton #tubulin #FtsZ We sincerely appreciate the constructive peer review and the reviewers’ thoughtful, supportive feedback, which greatly strengthened our work.
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Yoann Santin @ysantin.bsky.social · 14/07/2025
Excited to share our newly book chapter on using #miniTurbo proximity labeling in #bacteria We wrote it as a hands-on guide for anyone looking to get started with this approach. Congrats to @coralietesseur.bsky.social and Ophélie Remy 👏 @lalouxlab.bsky.social link.springer.com/protocol/10....
link.springer.com
Identification of In Vivo Protein Networks Using miniTurbo Proximity Labeling in Bacteria
Protein–protein interactions play a crucial role in many bacterial cell processes. miniTurbo-based proximity labeling has emerged as a powerful tool for the identification of in vivo protein net...
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Adrià Sogues @adriasogues.bsky.social · 30/07/2025
Happy to see the final version out! Cryo-EM structure of the PS2 S-layer in Corynebacterium 🔬! We show it provides mechanical support to the cell wall and assembles at the poles in coordination with PG. It can also be used for covalent surface display. www.pnas.org/doi/10.1073/... #microsky
pnas.org
Cryo-EM structure and polar assembly of the PS2 S-layer of Corynebacterium glutamicum | PNAS
The polar-growing Corynebacteriales have a complex cell envelope architecture characterized by the presence of a specialized outer membrane compose...
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Yoann Santin @ysantin.bsky.social · 25/07/2025
Our review on contact-dependent #predation is now out ! We define predation processes and describe how predators kill and eat their prey 😈 Repost appreciated ❤️
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Géraldine Laloux @lalouxlab.bsky.social · 29/07/2025
Bacterial cell wall & periplasm paradigm shift - important read #MicroSky www.nature.com/articles/s41...
nature.com
Peptidoglycan–outer membrane attachment generates periplasmic pressure to prevent lysis in Gram-negative bacteria - Nature Microbiology
Outer membrane attachment to peptidoglycan enables periplasmic pressure to build up and counter cytoplasmic turgor pressure, preventing lysis during osmotic challenges in Escherichia coli.
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Géraldine Laloux @lalouxlab.bsky.social · 25/07/2025
#MicroSky Summer read! Predatory bacteria kill and eat other bacteria. Their deadly actions come in many flavors, often via direct physical contact between predator & prey 🧛 How do they do it? Our review 📖 @coralietesseur.bsky.social @ysantin.bsky.social www.sciencedirect.com/science/arti...
sciencedirect.com
Strategies and mechanisms of contact-dependent predation in bacteria
Predatory bacteria kill other bacteria to acquire nutrients. Among diverse strategies to kill and feed on prey, contact-dependent predation stands out…
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Agata Starosta @agatastarosta.bsky.social · 09/07/2025
New review from our lab! Compartmentalization during bacterial spore formation. Focusing on latest discoveries in Bacillus subtilis #subtiwiki www.sciencedirect.com/science/arti...
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Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social · 07/07/2025
Folddisco finds similar (dis)continuous 3D motifs in large protein structure databases. Its efficient index enables fast uncharacterized active site annotation, protein conformational state analysis and PPI interface comparison. 1/9🧶🧬 📄 www.biorxiv.org/content/10.1... 🌐 search.foldseek.com/folddisco
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Yoann Santin @ysantin.bsky.social · 07/07/2025
You thought all OMPs were trimeric? 🧐 Not in our predator B. bacteriovorus! 🦠 Excited to have contributed to this great collab with the Lovering lab on this intriguing protein. @lalouxlab.bsky.social 👉 Paper here! www.nature.com/articles/s41... #BacterialPredation #Bdellovibrio #StructuralBiology
nature.com
A porin-like protein used by bacterial predators defines a wider lipid-trapping superfamily - Nature Communications
This study reveals that an outer membrane protein from the predator Bdellovibrio bacteriovorus forms a pentameric assembly that traps a lipid monolayer within. This allows the discovery of two superfa...
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STCmicrobeblog @stcmicrobeblog.bsky.social · 04/07/2025
a treat for fans of 𝘉𝘢𝘤𝘪𝘭𝘭𝘶𝘴 𝘴𝘶𝘣𝘵𝘪𝘭𝘪𝘴 and its intriguing spores 👇 #MicroSky
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Alexey Amunts @amunts.bsky.social · 23/06/2025
Running Phenix and stuck? Now you can ask the new Phenix chatbot anything from the 600-page tutorial about how to run any program. Big thanks to Tom Willinger for making this happen! Try it out: phenix-online.org/version_docs...
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Institut Pasteur Education @pasteuredu.bsky.social · 20/06/2025
🎶 Science meets creativity with TuberKiller! Yaëlle Wormser, PhD student featured in the My PhD at the Institut Pasteur series, raps her tuberculosis research. Discover how music and science collide to make research unforgettable! 👏 🎧 TuberKiller is also available on Spotify! @pasteur.fr
youtube.com
When science meets creativity: TuberKiller | My PhD at the Institut Pasteur
YouTube video by Institut Pasteur EDUCATION
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Félix Ramos-León @felixrl.bsky.social · 09/06/2025
Excited to share our latest review! Check it out to see what we know so far about how Staphylococcus aureus coordinates key processes during its cell cycle
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Yves Brun lab @brunlabcaulo.bsky.social · 02/06/2025
How does your favorite species elongate? 🧵 "Phenotypic plasticity in bacterial elongation among closely related species". Happy to see this paper in print @natcomms.nature.com. Nice work by @mariedelaby.bsky.social, Liu Yang et al. See original 🧵, different colours, same data and conclusions.
nature.com
Phenotypic plasticity in cell elongation among closely related bacterial species
Nature Communications - Multiple types of cell elongation have been described in bacteria, but little is known about how these strategies vary across species. Here, the authors use fluorescent...
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Nature Communications @natcomms.nature.com · 30/05/2025
The nucleoid of rapidly growing E. coli 🦠 localizes close to the inner membrane & is organized by transcription, translation, & cell geometry @michriscopy.bsky.social @uni-wuerzburg.de @heilemannlab.bsky.social @goetheuni.bsky.social #microbiology
bit.ly
The nucleoid of rapidly growing Escherichia coli localizes close to the inner membrane and is organized by transcription, translation, and cell geometry - Nature Communications
The mechanisms underlying bacterial chromosome configuration are not fully understood. Here, Spahn et al. show that the Escherichia coli nucleoid adopts a condensed, membrane-proximal configuration during rapid growth, with transcription and translation acting as main drivers of nucleoid organization.
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Arthur Charles-Orszag @acharlesorszag.bsky.social · 29/05/2025
The archaeal S-layer is not only pretty, it also carries crucial cellular functions, and the list keeps growing! @sshamphavi.bsky.social @marleenvw.bsky.social @archaellum.bsky.social and I wrote a little sheath sheet (+10 pts if you got the pun) 📖 Curr Opin Cell Biol 🔗 doi.org/10.1016/j.ce...
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Adrià Sogues @adriasogues.bsky.social · 20/05/2025
I’m thrilled to finally share this preprint! It contains a WOW Cryo-EM structure (likely one of the strongest protein fibers known to man 🤯), but we’ve also untangled its biological function: a novel type of virulence factor💀! www.researchsquare.com/article/rs-6...
researchsquare.com
Auto-crosslinking sporesilk fibers promote endospore and Cry toxin clustering
Bacillus thuringiesis infects and kills insect larvae via its spores and associated entomotoxin-containing parasporal bodies (PSBs). We show that endospores and PSBs of B. thuringiensis Sv. Israë...
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MMSB-Lyon @mmsb-lyon.bsky.social · 24/04/2025
📖 New publication from the TacC team at MMSB! Congratulations to Nathan Fraikin et al.! @nfrk92.bsky.social @agathe-couturier.bsky.social
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Félix Ramos-León @felixrl.bsky.social · 22/04/2025
Our review on Z-ring placement mechanisms in cocci is out! This was a fun one to write! #Microsky 🦠🧫
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Adrià Sogues @adriasogues.bsky.social · 12/02/2025
New preprint from the @remaut-lab.bsky.social ! Happy to share our latest work on a new member of the ENA family, protein fibers found on the spore’s surface. Using CryoID @mikesleutel.bsky.social identified F-ENA in BTK. The paper dives deep into its structure analysis by integrating X-ray and AF3
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ASM @asm.org · 23/01/2025
Using Bacillus subtilis as a model organism, this #JBacteriology review describes the signal transduction pathway & events leading to spore germination, incorporating the latest findings on transcription and translation likely detected during germination. asm.social/2g2
The germination pathway and related proteins in a Bacillus subtilis spore.
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