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Aaron Storey

@aaronstorey.bsky.social
103 followers 134 following 19 posts

Mass Spectrometry Core Director at Arkana Laboratories

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Reposted by Aaron Storey
Kidney International @kidneyint.bsky.social · 04/11/2025
Dual-Antigen Membranous Nephropathy doi.org/10.1016/j.kint.2025.10.006 #NephSky #MedSky #membranousnephropathy @mayoclinicpath.bsky.social @arkanalabs.bsky.social @lynncornell.bsky.social @aaronstorey.bsky.social
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Aaron Storey @aaronstorey.bsky.social · 25/07/2025
nature.com
Antigens in membranous nephropathy: discovery and clinical implications - Nature Reviews Nephrology
Since the discovery of PLA2R, several target antigens associated with membranous nephropathy have been identified. This Review describes the distinct clinical associations, pathology and prognostic fi...
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Aaron Storey @aaronstorey.bsky.social · 10/07/2025
Thanks Affinisep for the invitation to talk about our work. And thanks for making great desalting plates. m.youtube.com/watch?v=v8t-...
m.youtube.com
Affinisep webinar "Implementation of a mass spectrometry typing assay in clinical proteomics"
YouTube video by AFFINISEP
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Reposted by Aaron Storey
Ben Neely @benneely.com · 10/06/2025
Did you miss #asms2025 like me and wish you could ask a press correspondent how it was? Well look no further, #THEProteomicsShow with me and @proteomicsnews.bsky.social does just this! Find it wherever you find fine podcasts.
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Saganism @sagan.bsky.social · 12/05/2025
Science is more than a body of knowledge. It is a way of thinking; a way of skeptically interrogating the universe with a fine understanding of human fallibility.

If we are not able to ask skeptical questions, to interrogate those who tell us that something is true, to be skeptical of those in authority, then, we are up for grabs for the next charlatan (political or religious) who comes rambling along.
Carl Sagan
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Saganism @sagan.bsky.social · 02/05/2025
Dr. Anthony Fauci urges Americans not to accept "Normalization of Untruths".
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Saganism @sagan.bsky.social · 28/04/2025
That kind of skeptical, questioning, "don't accept what authority tells you" attitude of science - is also nearly identical to the attitude of mind necessary for a functioning democracy. They have very consonant values and approaches, and I don't think you can have one without the other.
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UW Genome Sciences @uwgenome.bsky.social · 23/04/2025
A transformer model for de novo sequencing of data-independent acquisition mass spectrometry data www.biorxiv.org/content/10.1...
biorxiv.org
A transformer model for de novo sequencing of data-independent acquisition mass spectrometry data
A core computational challenge in the analysis of mass spectrometry data is the de novo sequencing problem, in which the generating amino acid sequence is inferred directly from an observed fragmentat...
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Reposted by Aaron Storey
Michael MacCoss @maccoss.bsky.social · 28/04/2025
Andy Hoofnagle and I wrote a comment about the paper also in Clin Chem pubmed.ncbi.nlm.nih.gov/40272410/
pubmed.ncbi.nlm.nih.gov
The Need for Better Validation: Evaluating Aptamer and Proximity Extension Assays for Large-Scale Clinical Proteomics Studies - PubMed
The Need for Better Validation: Evaluating Aptamer and Proximity Extension Assays for Large-Scale Clinical Proteomics Studies
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Michael MacCoss @maccoss.bsky.social · 28/04/2025
This paper from Rooney et al is definitely worth a read if you are considering experiments with either Somascan or Olink. pubmed.ncbi.nlm.nih.gov/40172053/
pubmed.ncbi.nlm.nih.gov
Correlations Within and Between Highly Multiplexed Proteomic Assays of Human Plasma - PubMed
Precision of these 2 proteomics platforms in human plasma has diverged as the coverage has increased. These results highlight the need for careful consideration in platform selection based on specific...
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Saganism @sagan.bsky.social · 21/04/2025
Carl Sagan when asked, "Are you a Socialist?"
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Elise Schuenke @troubledminnesotan.bsky.social · 09/04/2025
Little gentle reminder to all the human creatives out there 💪
Panel 1: character crying at a desk
Text: this IS hard

Panel 2: character is now drawing determinedly
Text:  but I can do it
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Johanna Joyce @johannajoyce.bsky.social · 08/04/2025
Excited to see our image on the cover of #Immunity today 🤩 Congrats to the amazing @lbejarano.bsky.social & all authors for our #brain #tumor #vasculature study www.cell.com/immunity/ful... Huge 🙏 🙏 to the v talented @joanagcc.bsky.social for creating this super cover 🧠🧪 @cp-immunity.bsky.social
On the cover: The blood-brain barrier is a defining feature of brain tumors, shaping their biology and therapeutic response. In this issue, Bejarano et al. use single-cell RNA sequencing and spatial analysis to construct a vascular atlas of primary and metastatic brain tumors, revealing distinct alterations in endothelial and mural cells. Glioblastomas undergo substantial vascular remodeling compared to low-grade gliomas, while brain metastases exhibit even greater permeability and increased immune cell interactions. This unveiling of vascular heterogeneity is depicted as a red pencil coloring in the intricate details of tumor-associated blood vessels within a map of the human brain wherein a tumor is surrounded by diverse immune cells. Image by Joana C. Carvalho.
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Oded Rechavi @odedrechavi.bsky.social · 04/04/2025
That's dramatic (and cool): "archaea species can also form multicellular tissue–like structures when compressive forces are applied... ... These results establish multicellularity as a feature of all three domains of life" www.science.org/doi/10.1126/...
science.org
Tissue-like multicellular development triggered by mechanical compression in archaea
The advent of clonal multicellularity is a critical evolutionary milestone, seen often in eukaryotes, rarely in bacteria, and only once in archaea. We show that uniaxial compression induces clonal mul...
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Aaron Storey @aaronstorey.bsky.social · 03/04/2025
Spectrum of Kidney Pathology in Patients with Syphilis - Kidney International Reports www.kireports.org/article/S246...
kireports.org
Spectrum of Kidney Pathology in Patients with Syphilis
Syphilis has been associated with multiple kidney diseases, primarily studied within small series. A large cohort of patients with active syphilis who underwent kidney biopsy were examined to evaluate...
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Aaron Storey @aaronstorey.bsky.social · 01/04/2025
Arkana laboratories is seeking a highly motivated and detail-oriented Mass Spectrometry Lab Technician to join our newly established laboratory team. Please share and learn more in the link below.
arkanalabs.com
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Steve Sweet @stevemsweet.bsky.social · 18/03/2025
Our Translational Proteomics team is recruiting a Senior Scientist! We're based in Gaithersburg, MD, USA. A great opportunity to apply your skills to clinical trial samples, helping to develop new oncology drugs. Please share! astrazeneca.wd3.myworkdayjobs.com/Careers/job/...
astrazeneca.wd3.myworkdayjobs.com
Senior Scientist, Translational Proteomics, Global Mass Spectrometry
Senior Scientist, Translational Proteomics, Mass Spectrometry Introduction to role Do you have a passion for Translational Proteomics and Mass Spectrometry? We are looking for a bold scientist to impa...
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BWJones @bwjones.bsky.social · 16/03/2025
This has only been possible through NIH funding. Funding biomedical science through the NIH has been one of the greatest accomplishments of the United States of America for America, and for the world. We are ALL better for the work that passionate scientists funded by the NIH have been able to do.
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Saganism @sagan.bsky.social · 05/03/2025
It pays to keep an open mind, but not so open your brains fall out.
It pays to keep an open mind, but not so open your brains fall out.
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Aaron Storey @aaronstorey.bsky.social · 05/03/2025
Ordered a cathode ray tube to demonstrate the principle of mass spectrometry. But wouldn’t you know it, I’m struggling to get an ion beam on the new instrument. Any ideas on getting a sufficient voltage across the terminals?
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Eric Topol @erictopol.bsky.social · 01/03/2025
Francis Collins, the NIH Director for 12 years, led the Human Genome Project and other NIH efforts for 32 years, resigned today. Key words from his resignation letter www.nytimes.com/2025/03/01/u...
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Arghavan Salles, MD, PhD @arghavansallesmd.medsky.social · 28/02/2025
Of the 4000 researchers at NIH, only 20% are tenured. They’re going to fire all the rest as their contracts come up for renewal, absolutely decimating research at the NIH. This is catastrophic, not just for Americans, but for the whole world. www.science.org/content/arti...
science.org
NIH ban on renewing senior scientists adds to assaults on its in-house research
Policy follows firings of tenure-track scientists and suspension of training programs
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Ben Garcia @garcialabms.bsky.social · 28/02/2025
Was very proud of the US HUPO leadership who held an impromptu "Town Hall" during the US HUPO Conference this week to discuss the recent uncertainties and challenges in science. There were lots of anxieties, difficult questions, but sincere conversations. Most conversations were not centered 1/2
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Aaron Storey @aaronstorey.bsky.social · 27/02/2025
Happy National Protein Day! Cheers to my favorite cellular heteropolymer. nationaltoday.com/national-pro...
nationaltoday.com
National Protein day
Our bodies crave protein. Here's a look at how one of the body's most basic building blocks works.
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Saganism @sagan.bsky.social · 27/02/2025
Extraordinary claims require extraordinary evidence.
Extraordinary claims require extraordinary evidence.
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Chris Ashwood @cashwood.proteaglyco.com · 25/02/2025
A POGase is a huge advance in the glycomics field, which has typically relied on chemical or incomplete enzymatic releases (no Sia). Expect a lot of multi-omic studies enabled by this (N-glycomics, O-glycomics, and proteomics) since the peptide backbone is left intact. www.nature.com/articles/s41...
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Aaron Storey @aaronstorey.bsky.social · 26/02/2025
I had a wonderful time at my first #USHUPO conference. Great posters and great talks by great people who are driving the field to a better understanding of disease. Y’all are awesome. Thanks to Affinisep for the opportunity to talk about our work, and thanks to all for sharing their insights.
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Chris Ashwood @cashwood.proteaglyco.com · 21/02/2025
Our new paper in print describes a new approach: release and analysis of N-glycans in less than 24 hours. A perfect approach for those that are glycan-curious as it does not require changing any of your proteomics buffers! 1/5 #glycotime #teammassspec pubs.acs.org/doi/10.1021/...
pubs.acs.org
Swift Universal Glycan Acquisition (SUGA) Enables Quantitative Glycan Profiling across Diverse Sample Types
The ability to rapidly analyze complex mixtures of glycans derived from glycoproteins is important, but techniques are often laborious and require multiple glycan derivatization steps. Here, we descri...
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R/Proteomics @r-proteomics.bsky.social · 20/02/2025
We're here!! Aaaand we need some help :) Calling all #proteomics researchers www.reddit.com/r/proteomics...
reddit.com
Still seeking new moderators for /r/proteomics and Proteomics discord server
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BioMassSpec @realbiomassspec.bsky.social · 19/02/2025
Comprehensive Immunoglobulin G, A, and M glycopeptide profiling for large-scale biomedical research #MCP #MassSpec www.mcponline.org/article/S153...
mcponline.org
Comprehensive Immunoglobulin G, A, and M glycopeptide profiling for large-scale biomedical research
Glycosylation of immunoglobulin G (IgG) is recognized as a key modulator of cellular effector functions. At the same time, an increasing body of evidence underlines the importance of other antibody is...
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Saganism @sagan.bsky.social · 16/02/2025
We can judge our progress by the courage of our questions and the depth of our answers, our willingness to embrace what is true rather than what feels good.
We can judge our progress by the courage of our questions and the depth of our answers, our willingness to embrace what is true rather than what feels good.
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BioMassSpec @realbiomassspec.bsky.social · 13/02/2025
PNGaseF-Generated N-Glycans Adduct onto Peptides in the Gas Phase #JASMS pubs.acs.org/doi/10.1021/...
pubs.acs.org
PNGaseF-Generated N-Glycans Adduct onto Peptides in the Gas Phase
Glycoproteomics has recently increased in popularity due to instrumental and methodological advances. That said, O-glycoproteomic analysis is still challenging for various reasons, including signal su...
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Andrea Love, PhD | Biomedical Scientist @drandrealove.bsky.social · 12/02/2025
Nearly every medicine we benefit from started with NIH-funded research. Early discovery work starts in academia. Immunotherapies? Gene therapy for rare diseases? Alzheimer’s and Parkinson’s medicines? Vaccines? Novel cancer treatments? Psychiatric medicines? You betcha. 1/
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Kevin M. Kruse @kevinmkruse.bsky.social · 09/02/2025
Whenever you hear someone sneer about scientific research that seems useless to them — “they’re studying the spit of lizards?!” — remind them that’s exactly how we got Ozempic. globalnews.ca/news/9793403...
globalnews.ca
How a Canadian scientist and a venomous lizard helped pave the way for Ozempic - National | Globalnews.ca
In 1984, Dr. Daniel Drucker, an endocrinologist from the University of Toronto, discovered a hormone that helped pave the way for popular diabetes drugs such as Ozempic.
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Tim Clancy @viewfromarchstreet.com · 08/02/2025
On changes to #NIH indirect rates, there is a law in place that prohibits NIH from making such changes without the approval of Congress. See Division D, Title II Section 224 of The Further Consolidated Appropriations Act, 2024 (Public Law No: 118-47) grants.nih.gov/grants/guide...
grants.nih.gov
NOT-OD-24-110: Notice of Legislative Mandates in Effect for FY 2024
NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Notice of Legislative Mandates in Effect for FY 2024 NOT-OD-24-110. NIH
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Mia Farrow @miafarrow.bsky.social · 08/02/2025
NIH has cut billions of dollars in biomedical funding, effective immediately The move halts a large slice of money for most universities and research institutions virtually overnight, imperiling vital research in everything from cancer to heart disease. www.washingtonpost.com/health/2025/...
washingtonpost.com
NIH cuts billions of dollars in biomedical funding, effective immediately
The move halts a large slice of money for most universities and research institutions virtually overnight, imperiling vital research in everything from cancer to heart disease.
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Saganism @sagan.bsky.social · 04/02/2025
Science is not only compatible with spirituality; it is a profound source of spirituality.
Science is not only compatible with spirituality; it is a profound source of spirituality.
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Devin Schweppe @dschweppe.bsky.social · 31/01/2025
Really enjoyed writing this Insight on molecular phenotyping and clinical proteomics with @oligopain.bsky.social and Andy Hoofnagle. The hardest part was definitely keeping it to 10 citations with all of the exciting work in MS and non-MS proteomics applications in clinical settings!
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Aaron Storey @aaronstorey.bsky.social · 29/01/2025
Uncovering an underlying syphillis infection with mass spectrometry? It could happen: Membranous Nephropathy in Syphilis is Associated with Neuron-Derived Neurotrophic Factor. Excellent work by Sanjeev Sethi and colleagues. journals.lww.com/jasn/abstrac...
journals.lww.com
Membranous Nephropathy in Syphilis is Associated with... : Journal of the American Society of Nephrology
yphilis is associated with a novel target antigen called neuron-derived neurotrophic factor (NDNF). NDNF-associated MN has distinctive clinical and pathologic manifestations and NDNF appears to be the...
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Saganism @sagan.bsky.social · 08/12/2024
If it can be destroyed by the truth, it deserves to be destroyed by the truth. ~ Carl Sagan
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BK. Titanji @boghuma.bsky.social · 26/12/2024
NIH funded research made important breakthroughs in 2024. Another reminder of why sustained funding for science and research is so vital. Of note 3 NIH funded scientists were recognized with the nobel prize. 5 top health related research highlights here 👇🏾 www.nih.gov/news-events/...
nih.gov
2024 NIH Research Highlights - Promising Medical Findings
NIH findings with potential for enhancing human health include insights into the mechanisms of ME/CFS, a skin test to detect Parkinson’s disease and related disorders, and a promising target for catar...
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ProteomicsNews (Ben Orsburn) @proteomicsnews.bsky.social · 06/12/2024
Spatial proteomics is Nature's Method of the Year for 2024!! Congrats to the great people in our field featured in this virtual issue! www.nature.com/articles/s41...
nature.com
Method of the Year 2024: spatial proteomics - Nature Methods
Approaches for profiling the spatial proteome in tissues are the basis of atlas-scale projects that are delivering on their promise for understanding biological complexity in health and disease.
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BioMassSpec @realbiomassspec.bsky.social · 06/12/2024
Asymmetric N-Glycosylation in the Tailpiece of Recombinant IgA1 #JACS #MassSpec pubs.acs.org/doi/10.1021/...
pubs.acs.org
Asymmetric N-Glycosylation in the Tailpiece of Recombinant IgA1
Here, we employed a variety of mass spectrometry (MS)-based approaches, both (glyco)peptide-centric and protein-centric, to resolve the complex glycoproteoform landscape of recombinant IgA1 produced in HEK293 cells. These key immunoglobulins harbor several N- and O-glycosylation sites, making them considerably more heterogeneous than their IgG counterparts. We provide quantitative data on the occupancy and glycan composition for each IgA1 glycosylation site. Combining all data, we revealed that IgA1 molecules consist of at least three distinct populations with varying N-glycosylation site occupancies at the C-terminal tailpiece, namely, one with both glycosylation sites occupied, another with both glycosylation sites unoccupied, and a third asymmetric population with one glycosylation site occupied and the other unoccupied, challenging the prevailing acceptance that IgA1 N-glycosylation is symmetrical. This finding is significant, given that the tailpiece is involved in interactions with the J-chain and the Polymeric Immunoglobulin Receptor, and in general as antibody glycosylation is a quality attribute that needs to be carefully monitored, as the presence and nature of these modifications can affect the antibody’s efficacy, lifetime, stability, and binding and/or neutralizing capacities. Optimizing strategies to produce recombinant IgA1 requires efficient and specific quality control analytical strategies, as presented here, which is essential for therapeutic IgA1-based antibody development. We expect that the integrated MS-based strategy presented here may be beneficial to comprehensively characterize the glycoproteoform profiles of IgA1-based therapeutics, thereby improving their production and optimization processes and facilitating the pathway to bring more IgA1-based therapeutics into clinical applications.
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Aaron Storey @aaronstorey.bsky.social · 06/12/2024
Wish I had this in grad school.
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Aaron Storey @aaronstorey.bsky.social · 29/11/2024
I will be giving a talk at the Affinisep breakfast seminar at US HUPO 2025 on implementing a membranous nephropathy typing assay on a TSQ Altis.
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John Lukens @lukensjohnr.bsky.social · 27/11/2024
Reduced protein mobility (proteolethargy) is a pathogenic mechanism in chronic disease @cellpress.bsky.social www.cell.com/cell/fulltex...
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Aaron Storey @aaronstorey.bsky.social · 27/11/2024
Mass spectrometry is transforming our understanding of membranous nephropathy. Here is an excellent review by Sanjeev Sethi on the subject:
academic.oup.com
Why laser microdissection and mass spectrometry is the method of choice for detection of membranous nephropathy antigens
Membranous nephropathy is characterized by accumulation of antigen–antibody immune complexes along the subepithelial region of the glomerular basement memb
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