Sign in

Wagner Fagundes

@wagnercfagundes.bsky.social
437 followers 305 following 14 posts

Postdoc @ MLU Halle - Langner's lab. Passionate about evolution in plant pathosystems | #beproud he/him

PostsRepliesMedia
Reposted by Wagner Fagundes
Eirik Lågeide @eiriklag.bsky.social · 01/10/2026
Very excited to share the first preprint from my PhD with the community! This is also the first paper from the Plant Immunogenomics group with @galofir.bsky.social, so stay tuned for more! www.biorxiv.org/content/10.6... 1/n 🧵
biorxiv.org
NO VEIN is an ancestral immunity protein involved in plant-virus interaction
The conservation of immune systems from prokaryotes to eukaryotes can guide discovery of immunity genes across the tree of life. Most studies to date have focused on metazoan systems, while the extent...
28249
Reposted by Wagner Fagundes
Adam Bentham @adamrbentham.bsky.social · 30/09/2026
🚨 Please share! 🚨 I'm recruiting a fully funded 4-year Gatsby Sainsbury PhD studentship at Durham! 🌱🤖 Designing plant immune receptors from scratch, combining AI protein design with structural biology and plant immunity. If you're interested please get in touch! benthamlab.org shorturl.at/U2PdV
benthamlab.org
Bentham Lab — Durham University
Bentham Lab, Centre for Programmable Biological Matter, Durham University. Structural biology and de novo protein design applied to host-pathogen interactions, plant immunity, and neglected tropical d...
02935
Reposted by Wagner Fagundes
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social · 24/09/2026
AlphaFold Database is expanding into pandemic preparedness. Together with NVIDIA, DeepMind, EBI et al. we exhaustively predicted ~1.7 million homo- & heterodimers across 2,812 viral proteomes, resulting in 8,028 high-confidence predictions. 📄 research.nvidia.com/labs/dbr/ass... 🌐 alphafold.ebi.ac.uk
28838
Reposted by Wagner Fagundes
Andrew Urquhart @starships-andrew.bsky.social · 24/09/2026
Another step in the #Starship story - they move via a circular intermediate. Helps explain how these elements horizontally transfer and means that we can modify them into transformation vectors (starmids). www.biorxiv.org/content/10.6...
06136
Reposted by Wagner Fagundes
Thaís Dal’Sasso @thaisdalsasso.bsky.social · 04/09/2026
Thrilled to share the final version of our manuscript! 🎉 @estukenbrock.bsky.social and I investigated the secretome of the barley pathogen #Zymoseptoria passerinii and asked what its protein structures could tell us about #effector evolution. 🔗 link.springer.com/article/10.1... 🧶👇🏻
link.springer.com
Conserved protein folds underpin the diversification of secreted proteins in a fungal pathogen - BMC Microbiology
Background During host colonization, fungal plant pathogens secrete effector-like proteins that alter host cell physiology and target plant-associated microbes. However, rapid evolution and low sequen...
1179
Reposted by Wagner Fagundes
Camilla Molinari @camilla-moli.bsky.social · 14/09/2026
Excited to share this pre-print from my PhD work! We explore a Pmk1-Mst12-Bip1 network required for appressorium-mediated infection by the blast fungus 🌾 www.biorxiv.org/content/10.6... Thread 👇
biorxiv.org
A Pmk1-Regulated Mst12-Bip1 Network Coordinates Appressorium Function, Effector Deployment, and Invasive Growth by Magnaporthe oryzae
To cause rice blast disease, the filamentous fungus Magnaporthe oryzae develops a specialised infection cell called an appressorium, which generates enormous turgor to breach the rice leaf cuticle. Al...
33528
Reposted by Wagner Fagundes
Marcos Bermejo Ruiz @marcosbermejo.bsky.social · 14/09/2026
Going beyond Hi-C metagenomics! In our new pre-print, we adapt the Micro-C protocol to microbiomes. Achieving higher resolution, we recovered 3D genomes and bacterial-plasmid links. Check it here: www.biorxiv.org/content/10.6... @microbiome.bsky.social
2166
Reposted by Wagner Fagundes
Andy Posbe @adnroide.bsky.social · 10/09/2026
Excited to share Fold on Tight! 🎉 We distil recent advances in plant immunity into 10 lessons for using AI structure prediction critically and effectively, in plants and beyond. 📝 zenodo.org/records/2210...
13217
Reposted by Wagner Fagundes
Genome Biology and Evolution @genomebiolevol.bsky.social · 07/09/2026
Evseeva et al. sequenced a historic plant pathogen outbreak that swept across the island of Martinique, highlighting the role of horizontal transfer in shaping the ecological success of the emerging pathogen Ralstonia spp. 🔗 academic.oup.com/gbe/article/... #societyjournal #genome #evolution
academic.oup.com
Interspecies Exchange of Mobile Genetic Elements During a Plant Disease Outbreak
Abstract. Outbreak sequencing provides insight into the origin and evolutionary processes acting on emerging pathogens. Sequencing a historic multihost out
084
Reposted by Wagner Fagundes
Mariana Schuster @marischuster.bsky.social · 07/09/2026
I'm excited to share that my newly funded #ERCStG FRONTERA is recruiting two postdoctoral researchers at @ipbhalle.bsky.social 🌱🔬 If you are passionate about plant immunity, proteolysis, membrane proteins, or proteomics, I'd love to hear from you. 🧵 Please RT/share!
18885
Reposted by Wagner Fagundes
Science Magazine @science.org · 04/09/2026
It’s the first time a frog—or any amphibian—has been observed pollinating a plant, researchers reported in 2023.⁠ ⁠ Learn more on #NationalWildlifeDay: scim.ag/4riUU1G
This Brazilian frog might be the first pollinating amphibian known to science. Nectar-loving tree frog likely moves pollen from flower to flower
314841
Reposted by Wagner Fagundes
Daniel Croll @danielcroll.bsky.social · 04/09/2026
Our lab is looking for PhD students to join us in 2027 🎓🎉 The projects can be structured around our research directions: - Transposable element dynamics - Fungal pangenomics - ML/language model genomics applications - Pathogen adaptation More here pathogen-genomics.org ("Jobs") and please share! 🙏
pathogen-genomics.org
Evolutionary genomics of pathogens
Croll lab at University of Neuchatel. The lab of Daniel Croll wants to understand how pathogens evolve to cause disease. For this, we mainly focus on major crop pathogens to unravel mechanisms of rapi...
23852
Reposted by Wagner Fagundes
Cecile Lorrain @ccilelorrain.bsky.social · 31/08/2026
Now accepted: Haplotype-phased assemblies of the two poplar rust fungi species: Melampsora larici-populina and Melampsora allii-populina academic.oup.com/g3journal/ar...
academic.oup.com
Haplotype-phased assemblies of the two poplar rust fungi species: Melampsora larici-populina and Melampsora allii-populina
Abstract. Dikaryotic rust fungi maintain two distinct haploid nuclei for most of their life cycle, making their large, repeat-rich genomes difficult to ass
22116
Reposted by Wagner Fagundes
PLOS Biology @plosbiology.org · 27/08/2026
Giant viruses are known across eukaryotes. This study by @hyphaltip.bsky.social &co identifies Mycodnaviridae, a global giant #virus family that persistently infect zoosporic #fungi, providing a promising model for studying #giantVirus infection in eukaryotes. 🧪 #AcademicSky plos.io/3Sq4ioL
Allomyces javanicus California 12
Sexual structures of the fungus Allomyces javanicus California 12, which is persistently infected with a giant virus. Image credit Timothy James.

I confirm that the images provided can publish under the Creative Commons Attribution
License.
11912
Reposted by Wagner Fagundes
Gulnara Tagirdzhanova @metalichen.bsky.social · 11/08/2026
Our study on giant transposons Starship 🚀🧬 in the genome of the lichen fungus Xanthoria is now out in @pnas.org! What did we find out about Starships in #lichen fungi? 👇Updated thread below 🖥️ 🧪 🦠 🧫 #SymbioSky 1/6 www.pnas.org/doi/10.1073/...
17145
Reposted by Wagner Fagundes
Thorsten Langner @thorstenlangner.bsky.social · 06/08/2026
🚨safe the date🚨 our SNP2Prot SFB @snp2prot.bsky.social @unihalle.bsky.social will host an international conference next summer (June 21st-23rd 2027) with a fantastic line-up of international experts. Registration opens October 17th.
02619
Reposted by Wagner Fagundes
Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 05/08/2026
PLEASE SHARE! New job openings in my lab @zmbp-tuebingen.bsky.social. We have a broad interest into the mechanistic basis of how molecular complexes are rewired during cellular development in plants and during invasion by pathogens. 🌱🍄🔬 See details below 👇 #PlantSciJobs
274105
Reposted by Wagner Fagundes
MPI for Biology Tübingen & Friedrich Miescher Laboratory @mpi-bio-fml.bsky.social · 29/07/2026
Congratulations to @sheilaroitman.bsky.social, postdoctoral researcher in Detlef Weigel’s department @plantevolution.bsky.social, on receiving the Women’s Postdoctoral Career Development Award in Science from the Weizmann Institute! Her research explores how viruses shape plant microbiomes.
bio.mpg.de
Career Development Award for Sheila Roitman
23210
Reposted by Wagner Fagundes
Team Thomma @teamthomma.bsky.social · 28/07/2026
📣 New preprint! 🧵 Fantastic work led by @antonkraege.bsky.social Fact: Cerato-platanins are everywhere in fungi. Found across the fungal kingdom, implicated in everything from development to virulence to immune activation. But what do they *actually* do? We finally found the answer 👇
25343
Reposted by Wagner Fagundes
Alice Laigle @alicelaigle.bsky.social · 23/07/2026
📝 NEW PREPRINT It’s with an immense joy that our preprint is finally out and it’s my first first co-author paper!!! 🧬🍄 What is the diversity of 3D genome architectures in fungi? We reconstructed the 3D genome architecture of public Hi-C data from 55 fungal. Preprint: lnkd.in/enxTh2Cm
26021
Reposted by Wagner Fagundes
Thorsten Langner @thorstenlangner.bsky.social · 01/07/2026
‼️Job altert🚨📢 please spread the word: We're looking for a postdoctoral researcher to join our new department "Phytopathology and Plant Protection" at @unihalle.bsky.social. www.verwaltung.uni-halle.de/DEZERN3/AUSS...
35067
Reposted by Wagner Fagundes
Thorsten Langner @thorstenlangner.bsky.social · 08/06/2026
‼️Job alert📢🚨 We are recruiting a Junior Group Leader (f) in Protein Science at Martin Luther University Halle-Wittenberg, jointly hosted by the Institute of Biochemistry and Biotechnology and our Collaborative Research Centre CRC 1664 "Plant Proteoform Diversity – SNP2Prot."
14340
Reposted by Wagner Fagundes
Thomas Badet @tbadet.bsky.social · 11/06/2026
Nearly a year after our symposium on Repeat-Induced Point (RIP) mutations, I’m happy to share the fruit of some of our discussions. The fungal RIP hypermutator mechanism has deep eukaryotic roots www.sciencedirect.com/science/arti... We hope to spark interest in this underappreciated mechanism.
Evolution of major eukaryotic genome defense systems.
The figure is organized along two axes representing core mechanistic features (homology recognition, small interfering RNA, and
heterochromatin assembly) and their lineage-specific elaborations. We hypothesize that a recombination-independent DNA
homology recognition system present in the eukaryotic common ancestor facilitated the emergence of both heterochromatin
assembly and small RNA-based repeat silencing. From this conserved ancestral core, lineage-specific gene neofunctionalizations
gave rise to distinct defense pathways: the RdDM pathway in plants; the piRNA and KRAB–ZFP pathways in vertebrates; and the
repeat-induced point mutation (RIP), methylation induced premeiotically (MIP), MSUD, and tandem repeat-induced sexual silencing
(TRISS) systems in filamentous ascomycete fungi. Question marks indicate steps for which the molecular mechanisms remain
unknown.
14622
Reposted by Wagner Fagundes
Diana Gómez De La Cruz @dianagdlc.bsky.social · 05/06/2026
So proud to see this story finally out!🎉 We added new data since our previous preprint—transgenic barley plants with an engineered immune receptor that fights off two fungal pathogens at once. Short 🧵 and link to the original preprint thread on X👇 www.science.org/doi/10.1126/...
science.org
Molecular mimicry of a pathogen virulence target by a plant immune receptor
Plants and animals respond to pathogen attack by mounting innate immune responses that require intracellular nucleotide-binding leucine-rich repeat (NLR) proteins. These immune receptors detect pathog...
1210359
Reposted by Wagner Fagundes
Camilla Molinari @camilla-moli.bsky.social · 01/06/2026
@talbotlabtsl.bsky.social and I reviewed what we know about our favourite cereal killer and compared it to human-infecting relatives. Check it out! 👇 www.tandfonline.com/doi/full/10....
tandfonline.com
Pathogenicity and virulence of the blast fungus Magnaporthe oryzae
The blast fungus Magnaporthe oryzae is the causal agent of the most serious disease of cultivated rice and an emerging threat to wheat production. Controlling blast diseases is therefore critical t...
1158
Reposted by Wagner Fagundes
Team Thomma @teamthomma.bsky.social · 30/05/2026
📣Last week another @biorxivpreprint.bsky.social dropped: "A fungal pathogen effector that shapes host plant microbiota kills bacteria through lipoteichoic acid binding and membrane disruption" a joint effort by @nicksnelders.bsky.social & @gabriellapetti.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
15331
Reposted by Wagner Fagundes
Eva Stukenbrock @estukenbrock.bsky.social · 28/05/2026
Many pathogens that infect wild plants are close relatives of crop pathogens. Important model systems for studying plant diseases. Check out the special issue on wild plant pathosystems published in the Philosophical Transactions B: royalsocietypublishing.org/rstb/issue/3...
royalsocietypublishing.org
Volume 381 Issue 1951 | Philosophical Transactions of the Royal Society B | The Royal Society
Influential themed journal issues across the life sciences.
02514
Wagner Fagundes @wagnercfagundes.bsky.social · 27/05/2026
Congratulations @estukenbrock.bsky.social 🥳🥳🥳 Well deserved!
041
Reposted by Wagner Fagundes
The Tattooed Professor @schwessinger.bsky.social · 11/05/2026
Finally made it.... congratulations all.
02713
Reposted by Wagner Fagundes
Jana Sperschneider @jsperschneider.bsky.social · 07/05/2026
📢 EffectorGeneP is finally here! Stop missing small, single-exon or orphan genes from your favourite pathogen genome. Current tools only annotate 15%-78% of effector genes, EffectorGeneP finds 95% - including the large AvrSr26 family in stem rust. #Bioinformatics 📖 www.biorxiv.org/content/10.6...
biorxiv.org
04328
Reposted by Wagner Fagundes
Fantin Mesny @mesny.bsky.social · 29/04/2026
🎉 📰 Very happy to share the journal publication of our manuscript "Plant-associated fungi co-opt ancient antimicrobials for host manipulation"! #ScienceAdvancesResearch @science.org @teamthomma.bsky.social www.science.org/doi/10.1126/...
science.org
Plant-associated fungi co-opt ancient antimicrobials for host manipulation
Fungal effectors may have evolved from ancient antimicrobials, shaping plant microbiota and immunity during infection.
69649
Reposted by Wagner Fagundes
Altegoerlab @faltegoer.bsky.social · 21/04/2026
We just received funding for a 2yr postdoc position on cryoEM of fungal gpcrs. Official call will open soon. Contact me if you‘re interested!
21710
Reposted by Wagner Fagundes
PlantEvolution 🌱🌾 @plantevolution.bsky.social · 16/04/2026
1/8 🔥 New preprint dropped: Dynamic co-existence of bacteriophages and their hosts 🦠 in the Arabidopsis thaliana 🌱 phyllosphere Work led by the indomitable @sheilaroitman.bsky.social‬ #plantscience #microbiome #holobiont www.biorxiv.org/content/10.6...
48246
Reposted by Wagner Fagundes
Cecile Lorrain @ccilelorrain.bsky.social · 15/04/2026
Thrilled to share our paper now out in Nature Plants 🎉 We developed a genome-host association (GHA) approach to study pathogen adaptation directly from field metadata by using the originating host cultivar as phenotype. www.nature.com/articles/s41...
nature.com
Genome–host association mapping reveals wheat pathogen genes involved in host specialization - Nature Plants
This study introduces genome–host association (GHA), leveraging natural epidemics to map the genetic landscape of host adaptation in the pathogen Zymoseptoria tritici. Applied to 832 wheat fungal stra...
35231
Reposted by Wagner Fagundes
Patience Chatukuta @drpchronicles.bsky.social · 10/04/2026
Check out our paper on the diversity of crop wild relatives in Zimbabwe! #CropWildRelatives #PlantScience #Biodiversity #Conservation #ClimateResilience #Zimbabwe www.linkedin.com/posts/dr-pat...
linkedin.com
A national crop wild relative checklist for Zimbabwe reveals edible crop wild relative diversity of regional and global importance | Dr Patience Chatukuta
📢 Check out this checklist of crop wild relatives in Zimbabwe! 💡 Crop wild relatives are the untamed cousins of our cultivated crops. 📊 The checklist provides baseline data for crop improvement and...
044
Reposted by Wagner Fagundes
Eva Stukenbrock @estukenbrock.bsky.social · 13/04/2026
So diverse and yet conserved. Check out opinion paper by Leonhard Pachinger @leopach.bsky.social on antimicrobial effectors produced by fungal pathogens: www.sciencedirect.com/science/arti...
sciencedirect.com
Antimicrobial effectors of plant-associated fungi: multipurpose proteins with fast-evolving surfaces and structurally conserved cores
Plants are exposed to a variety of devastating pathogens, causing significant yearly yield losses. In order to facilitate infections, plant pathogens …
02317
Reposted by Wagner Fagundes
Thorsten Langner @thorstenlangner.bsky.social · 01/04/2026
Now that it's official i've got some news! Our group has moved from @mpi-bio-fml.bsky.social to @unihalle.bsky.social where I am now leading the department for phytopathology and plant protection 🍄🌾🧬
67419
Reposted by Wagner Fagundes
MPI for Biology Tübingen & Friedrich Miescher Laboratory @mpi-bio-fml.bsky.social · 24/03/2026
It’s time to say farewell to ERC Research Group Leader Thorsten Langner after nearly 3 years at the institute. He reflects on his time here, key milestones, and what’s next: tinyurl.com/2vce2d6k Congratulations on your new position—we wish you and your team all the best for the future!
27722
Reposted by Wagner Fagundes
Slavica Janevska @slavi-jan.bsky.social · 21/03/2026
Check out our new review on exciting advances in molecular tools for studying DNA and RNA biology of fungal pathogens! w/ Matthew Blango @femsjournals.bsky.social @trr124-funginet.bsky.social @leibniz-hki.de academic.oup.com/microlife/ar...
academic.oup.com
Advances in molecular tools for elucidating nucleic acid biology in fungal pathogens
Check out this new review highlighting advances in DNA-, RNA-, and chromatin-based technologies and how they are used to keep pace with the emerging threat
11710
Reposted by Wagner Fagundes
Toby Baril @tobybarilbio.bsky.social · 05/03/2026
Need to annotate transposons in fungal genomes? 🧬 Good news #MycoMobilome is now live! Check it out here: doi.org/10.1093/narg... Access the sequences through our Zenodo community (you can also contribute seqs with credit), and synchronisation with @dfam.bsky.social! w/ @danielcroll.bsky.social
doi.org
MycoMobilome: a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom
Abstract. Transposable elements (TEs) are found in nearly all eukaryotic genomes. Despite significant advances in the sequencing of genomes, TE resources r
02512
Reposted by Wagner Fagundes
Clémence Marchal @clemmar.bsky.social · 02/03/2026
There is a week left to apply for two available positions in my lab @ipbhalle.bsky.social - PhD: ipb-halle.mhm.jobs/12-phd-posit... - Postdoc: ipb-halle.mhm.jobs/13-postdocto... Earliest start date: 01/05/2026. We are interested in plant immune receptor biochemistry and evolution. Please share!
03639
Reposted by Wagner Fagundes
Eva Stukenbrock @estukenbrock.bsky.social · 26/02/2026
@thaisdalsasso.bsky.social is applying new tools to address the evolution and functional diversification of secreted proteins of fungal plant pathogen. Preprint here: www.biorxiv.org/content/10.6...
biorxiv.org
01815
Reposted by Wagner Fagundes
Jule Neumann @juleneumann.bsky.social · 19/02/2026
Honored and over the moon to add another Chronobiology talk to the TEDx universe at Aberystwyth next week! 🌓🦟 There are still some tickets left! tedxaberystwyth.com @aberuni.bsky.social @mpi-evolbio.bsky.social @clocksevolution.bsky.social @bioclocksuk.bsky.social
tedxaberystwyth.com
TEDxAberystwyth
Ideas worth spreading
0197
Reposted by Wagner Fagundes
Team Thomma @teamthomma.bsky.social · 14/02/2026
📣 Our latest story just dropped on bioRxiv:: A structurally unique effector shared between Verticillium dahliae and Fusarium oxysporum is involved in cotton defoliation and virulence on other hosts www.biorxiv.org/content/10.6... 🧵
biorxiv.org
34630
Reposted by Wagner Fagundes
MPI for Evolutionary Biology @mpi-evolbio.bsky.social · 11/02/2026
Today is the #InternationalDayofWomenandGirlsinScience ✨ To celebrate, we’re opening registration for our workshop "Women in Evolutionary Biology II" — keynotes, research, networking, and discussions on equality & inclusion in science. 📍 Plön (Germany) | 🔗 workshops.evolbio.mpg.de/event/144/ov...
1109
Reposted by Wagner Fagundes
Clémence Marchal @clemmar.bsky.social · 05/02/2026
Please share! We are looking for a PhD student (4 years) starting from 01/05/2026 at @ipbhalle.bsky.social! If you are interested in plant immunity, receptor biochemistry and evolution, consider applying! Deadline 09/03/2026. Application portal: ipb-halle.mhm.jobs/10-phd-posit...
ipb-halle.mhm.jobs
PhD position in biology (m/f/d) (1/2026)
Leibniz Institute of Plant Biochemistry (Halle) offers a PhD position in Biology
03748
Reposted by Wagner Fagundes
Clémence Marchal @clemmar.bsky.social · 05/02/2026
Please share! We are looking for a postdoctoral scientist (2 years, extension possible) starting from 01/05/2026 at @ipbhalle.bsky.social! The project focuses on plant immune receptor biochemistry and structural biology. Deadline 09/03/2026. Apply at: ipb-halle.mhm.jobs/11-postdocto...
ipb-halle.mhm.jobs
Postdoctoral position in biology (m/f/d) (2/2026)
Leibniz Institute of Plant Biochemistry (Halle) offers a Postdoctoral position in Biology
04856
Reposted by Wagner Fagundes
EvolDir @evoldir.bsky.social · 01/02/2026
Join the Women in Evolutionary Biology II workshop from June 1-3, 2026, at the Max Planck Institute in Plön, Germany. Open to all genders. More info: workshops.evolbio.mpg.de/event/144/…. Registration closes on Feb 20, 2026. #workshop
workshops.evolbio.mpg.de
Women in Evolutionary Biology II
Women in Evolutionary Biology is an event to promote diversity and equality in the field. For this purpose, we invited 6 outstanding women as keynote speakers, offering a unique opportunity to learn from their experiences and celebrate their achievements. While all keynote speakers are women, scientists of all genders and backgrounds in evolutionary biology are welcome to participate in scientific presentations and discussion sessions on topics relevant for women in science. The workshop’s...
0139
Reposted by Wagner Fagundes
Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 30/01/2026
Please share! My group at @zmbp-tuebingen.bsky.social is offering a post-doctoral position (4 years). We look for a structural biologist with experience in Cryo-EM/Cryo-ET to investigate the mechanisms of host invasion by pathogenic fungi. Deadline February 28th! uni-tuebingen.de/universitaet...
085119
Reposted by Wagner Fagundes
Thaís Dal’Sasso @thaisdalsasso.bsky.social · 26/01/2026
Congrats @marco-guerreiro.bsky.social. @estukenbrock.bsky.social and colleagues on this exciting study linking codon optimization and adaptive translation to lifestyle transitions in a group of fungi.
1126