Reposted by Sultan NazirNature Microbiology @natmicrobiol.nature.com · 17/09/2026Out Now! Bacterial growth rate in populations and single cells #MicroSkygo.nature.comBacterial growth rate in populations and single cellsNature Microbiology, Published online: 17 September 2026; doi:10.1038/s41564-026-02449-6In this Perspective, Levin and Wang give a brief history of bacterial growth rate and discuss how it is connected to nutrient availability and macromolecule synthesis, with a focus on (p)ppGpp as a central hub regulating resource allocation and, indirectly, growth rate at the single-cell level. 04216
Reposted by Sultan NazirGEValT @gevaltcrispr.bsky.social · 17/09/2026Meet GEValT! Germline Engineering by Viral transduction! No more injections www.biorxiv.org/content/10.6...biorxiv.orgInfectious transgenesis in arthropodsIn the last decade, there has been an explosion in the development of in vivo germline genetic editing technologies in arthropods, first pioneered by the Receptor-Mediated Ovary Transduction of Cargo ... 24318
Reposted by Sultan NazirGenome Biology and Evolution @genomebiolevol.bsky.social · 04/08/2026Nazir & @bramvandijk.bsky.social demonstrate how phage lifecycle dynamics and spatial heterogeneity drive mobile genetic element–gene associations, providing new insights into the evolution of phage-encoded virulence. 🔗 doi.org/10.1093/gbe/evag181 #societyjournal #virusdoi.orgViral Lifecycle Dynamics and Spatial Structure Explain Why Accessory Genes Are Associated With Temperate PhagesAbstract. Genes encoding for virulence factors are frequently found on prophages, yet the evolutionary forces driving this association remain unclear. The 054
Sultan Nazir @sultannazir.bsky.social · 07/08/2026🚨 New paper with @bramvandijk.bsky.social, out now in Genome Biology and Evolution! Why do accessory genes so often hitch a ride on temperate phages? We show that spatial structure alone can tip selection toward a prophage locus over a chromosomal one. doi.org/10.1093/gbe/... 🧵 Two mechanisms:doi.orgViral Lifecycle Dynamics and Spatial Structure Explain Why Accessory Genes Are Associated With Temperate PhagesAbstract. Genes encoding for virulence factors are frequently found on prophages, yet the evolutionary forces driving this association remain unclear. The 1249
Reposted by Sultan NazirMark Chadbourn @chadbourn.bsky.social · 20/07/2026Thousands of young people from India’s Cockroach Janta Party are marching on parliament. It’s the latest protest movement that has been sweeping across the Global South - the young who feel they’re being ignored by the elite.bbc.co.ukJantar Mantar, CJP, parliament: Thousands of youth-led 'cockroach' protesters march in DelhiDelhi police say the Cockroach Janta Party (CJP) protesters, who want education reforms, don't have permission for the march. 319866
Reposted by Sultan NazirDavid Giron Villalobos @dagivi.bsky.social · 22/06/20261/4. Excited to share the first preprint from my PhD at @binfutrecht.bsky.social and @uti-revisited.bsky.social 🐥. In this work, we explored the urinary tract microbiome composition (urobiome) by combining data from multiple metagenomic sequencing studies 💛🦠. www.biorxiv.org/content/10.6...biorxiv.orgCross-study metagenomics analysis reveals distinct microbial signatures of urinary tract infectionsBackground Urinary tract infections (UTIs) represent a major public health concern, increasingly complicated by rising antibiotic resistance, diminishing treatment efficacy, and increasing prevalence ... 32010
Reposted by Sultan NazirJeroen Meijer @jeroenmeijer.bsky.social · 01/06/2026Thrilled that our paper "Eco-evolutionary dynamics of massive, parallel bacteriophage outbreaks in compost communities" is out! 🎉🦠🧬 www.science.org/doi/10.1126/... w/ @paulbrainey.bsky.social, Petros Skiadas, Paulien Hogeweg, @bedutilh.bsky.socialscience.orgEco-evolutionary dynamics of massive, parallel bacteriophage outbreaks in compost communitiesA single bacteriophage can dominate microbial communities yet only evolves when migration changes its ecological context. 24419
Sultan Nazir @sultannazir.bsky.social · 28/05/2026Some snaps from trails around the SFU and UBC campuses from the last 2 months. Vancouver is beautiful 😭 121
Reposted by Sultan NazirTheoretical Biology & Bioinformatics @ UU @binfutrecht.bsky.social · 13/05/2026Proud of @ehauptfeld.bsky.social for receiving the Young Investigator Award by @biosb.bsky.social, in recognition to her PhD achievements in research and education! Very well deserved, and congratulations! @ubc-uu.bsky.social @utrechtuniversity.bsky.social 093
Reposted by Sultan NazirEllinor Alseth @ellinoralseth.bsky.social · 13/05/2026When is an antiphage mechanism an evolved defence adaptation? This question has been on my mind for so long, because despite the field’s rapid progress there is currently no widely agreed framework in place to answer it. So @brownlab.bsky.social and I wrote this, and I'm happy to share the preprint!ecoevorxiv.orgThe bacterial immune system: identifying evolved defense adaptations 15326
Reposted by Sultan NazirMart Krupovic @mkrupovic.bsky.social · 11/05/2026With Eugene Koonin, we wrote a rather comprehensive review on the origin, evolution and organization of the #virosphere. We describe all 10 viral realms and the logic behind them, and so much more. Check it out! comptes-rendus.academie-sciences.fr/biologies/ar... 1256130
Reposted by Sultan NazirAsher Leeks @asherleeks.bsky.social · 14/04/2026The Social Lives of Viruses is coming to Vancouver, Canada, from 4th-8th August 2026! This is a free meeting dedicated to all aspects of virus-virus interactions & evolution. To apply: socialviruses.zoology.ubc.ca @sociovirology.bsky.social #socialviruses #evosky #lovevirology #virosky 06146
Reposted by Sultan NazirSam von der Dunk @derdunk.bsky.social · 09/04/2026Very excited with the online publication of our modeling work on the evolution of sexual reproduction during obligate endosymbiosis: doi.org/10.1098/rstb.... The first publication of Alkmini Zania 🎉; together with Paulien Hogeweg.doi.org 12111
Reposted by Sultan NazirBram van Dijk 🏳️🌈 @bramvandijk.bsky.social · 23/03/2026Phd Position alert 🚨 Join our project ASTRAfun (Adaptation and Starship Traffic in Root-Associated fungi), in which we will use computational models to unveil the hidden dynamics of fungal evolution. It’s not going to be just regular fun. It’s going to ASTRAfun. 🤓 www.uu.nl/en/organisat...uu.nlPhD Position in Computational Modelling of Fungal EvolutionHow do giant mobile elements called ‘Starships’ reshape fungal plant pathogens? Help us computationally model their spread and impact in nature and agriculture! 12527
Reposted by Sultan NazirCharles Mullon @charlesmullon.bsky.social · 09/03/2026With @saramitri.bsky.social, @sonjalehtinen.bsky.social and L. Lehmann we’ve launched the UNIL Center for Theory in Ecology and Evolution @unil.bsky.social🇨🇭 To kick things off, we’re offering short visiting fellowships for theorists in ecology & evolution. Apply & pls RP 😀 tinyurl.com/2wem36zzunil.chUnil center for theory in ecology and evolution (UCTEE) - FBM UnilPage Unil Center for Theory in Ecology and Evolution of site Faculty of Biology and Medicine hosted by the University of Lausanne 09276
Reposted by Sultan NazirJorge Moura de Sousa @jmouradesousa.bsky.social · 02/03/2026➡️ preprint from the lab! Bacteria have loads of antiviral defences in their mobile genetic elements (MGEs). So when MGEs move between bacteria, the defences move with them, generating a fast turnover of defences in bacteria. But what about the antiviral defence turnover in the MGEs themselves? 🤔 🧵👇biorxiv.org 17747
Reposted by Sultan NazirBram van Dijk 🏳️🌈 @bramvandijk.bsky.social · 25/02/2026In case you missed it: our review titled "Spatial structure: shaping the ecology and evolution of microbial communities" is out! 🚨 Let me hit you with some highlights on why spatial structure matters. (and why you should care!) Sharing is appreciated 🙏 🧵👇 doi.org/10.1093/fems... 314788
Reposted by Sultan NazirMarcel Bäcker @marcelbaecker.bsky.social · 12/02/2026Most microbes don't live in shaking flasks; spatial structure shapes how microbes interact and evolve at every scale, as we discuss in our recent review @jeroenmeijer.bsky.social @simonvanvliet.bsky.social @bedutilh.bsky.social @bramvandijk.bsky.social and others academic.oup.com/femsre/artic... 🧵👇academic.oup.comSpatial structure: shaping the ecology and evolution of microbial communitiesSpatial structure naturally emerges in microbial communities, shaping growth, interactions, and evolution, and revealing how microscale processes scale up 25029
Reposted by Sultan NazirJosje Romeijn @jromeijn.bsky.social · 09/12/2025Now officially published in Current Biology 🥳🥳 @mfseidl.bsky.social @binfutrecht.bsky.social www.cell.com/current-biol...cell.comExtensive horizontal transfer of transposable elements shapes fungal mobilomesRomeijn et al. reveal that horizontal transposon transfer is widespread in fungi, contributing up to 70% of transposon content in some taxa. The authors uncover thousands of events across diverse line... 36337
Reposted by Sultan NazirDaniel Tamarit @danieltamarit.bsky.social · 10/12/2025Welcome to Bluesky, @pieterhart.bsky.social! Pieter just joined my group as a PhD student studying bacterial genome evolution—exciting years ahead! Here he is enjoying a chat about his MSc work (w/ @kassipan.bsky.social & @ettema.bsky.social) at Science4Life @utrechtuniversity.bsky.social 🧬🦠✨ 2234
Reposted by Sultan NazirJamie Hall @jpjhall.bsky.social · 18/11/2025🚨#PhD studentship opportunity! Plasmids provide bacteria with antimicrobial resistance, but do they have more fundamental effects on behaviour? 🧫🦠💫🧟♂️ Apply for a 4y funded MRC DiMeN position with me and Jamie Wheeler @livuni-ives.bsky.social www.findaphd.com/phds/project...findaphd.comMRC DiMeN Doctoral Training Partnership: Resistant zombies: how drug-resistance plasmids manipulate the behaviour of the opportunistic pathogen Pseudomonas aeruginosa at University of Liverpool on Fin...PhD Project - MRC DiMeN Doctoral Training Partnership: Resistant zombies: how drug-resistance plasmids manipulate the behaviour of the opportunistic pathogen Pseudomonas aeruginosa at University of Li... 13044
Reposted by Sultan NazirCarl-Magnus Svensson @cmsvensson.bsky.social · 18/09/2025Followed by more interesting science about phages by @sultannazir.bsky.social 021
Sultan Nazir @sultannazir.bsky.social · 25/08/2025Excited to present work from my preprint at #SMBI2025 @uni-jena.de on September 18th. I will be speaking on how spatial structure can explain the association of microbial accessory genes with inducible prophages. asb-conference.hki-jena.de/schedule/asb-conference.hki-jena.deSchedule – Applied Systems Biology SymposiaEmmanuel Saliba, University of Würzburg, Germany. 062
Reposted by Sultan NazirRichard Lenski @relenski.bsky.social · 12/08/2025Excited to share new #program, STEPS, which can simulate #dynamics of the E. coli Long-Term Evolution Experiment (#LTEE) or other microbes in serial transfer regime. telliamedrevisited.wordpress.com/2025/08/12/s... STEPS developed by @devinmlake.bsky.social, Zachary Matson, Minako Izutsu, and me.telliamedrevisited.wordpress.comSTEPS To ItAnnouncing a new program, called STEPS, to simulate the dynamics of evolving microbial populations. 418367
Reposted by Sultan NazirMary (geographile) @geographile.bsky.social · 28/06/2025Okay this is what Pride is. "Around 100,000 march at Budapest Pride in defiance of Hungary’s ban on the event" The picture brings me incredible joy. So many people. Giant flag. So much joy. So much bravery. www.pbs.org/newshour/wor...pbs.orgAround 100,000 march at Budapest Pride in defiance of Hungary's ban on the eventMarchers gambled with potential police intervention and heavy fines to participate in the 30th annual Budapest Pride, which was outlawed by a law passed in March by Prime Minister Viktor Orbán's right... 0296
Reposted by Sultan NazirJosje Romeijn @jromeijn.bsky.social · 20/06/2025The first paper of my PhD is now available as a preprint! 🎉 Transposable elements (TEs) don't just jump within fungal genomes, they also move extensively between species. In this study, we screened over 1,300 fungal genomes and found a conservative estimate of 5,500+ horizontal transfer events.biorxiv.org 710245
Reposted by Sultan NazirBram van Dijk 🏳️🌈 @bramvandijk.bsky.social · 09/05/2025🧩 PhD Position – Origins of Darwinian Inheritance 🧩 This joint PhD project between the @rug.nl (Rampal Etienne & Martijn Egas) and @utrechtuniversity.bsky.social (Bram van Dijk) explores how simple prebiotic systems could evolve reliable information transfer. Apply here: shorturl.at/WgYMF 23435
Reposted by Sultan NazirSteve Yurko @steveyurko.com · 16/04/2025Trans women are women. Trans men are men. Fuck Harry Potter. 3331431066
Reposted by Sultan NazirAlexander Harms @aharms485.bsky.social · 06/02/2025🚨 🧬 Updated preprint on the completed BASEL collection - what's new? Some fun with bacterial immunity and a new P22 relative infecting E. coli K-12. A thread 🧵 412248
Reposted by Sultan NazirNanami Kubota @nanamikubota.bsky.social · 02/04/2025Preprint out! Bacteria w/ hyper-replicative filamentous phage lead to overnight emergence of cheater phages. Bacteria w/ both phages can outcompete wildtype, then rapidly lose phage via a phage Tragedy of the Commons @shellyscrib.bsky.social @vscooper.micropopbio.org www.biorxiv.org/content/10.1...biorxiv.orgFilamentous cheater phages drive bacterial and phage populations to lower fitnessMany bacteria carry phage genome(s) in their chromosome (i.e., prophage), and this intertwines the fitness of the bacterium and the phage. Most Pseudomonas aeruginosa strains carry filamentous phages ... 75939
Reposted by Sultan NazirNature Reviews Microbiology @natrevmicro.nature.com · 11/03/2025New online! Interactions and evolutionary relationships among bacterial mobile genetic elementsnature.comInteractions and evolutionary relationships among bacterial mobile genetic elementsNature Reviews Microbiology, Published online: 11 March 2025; doi:10.1038/s41579-025-01157-yIn this Review, Lang and colleagues present an overview of the current knowledge landscape regarding mobile genetic elements in bacteria, with a focus on their… 03427
Reposted by Sultan NazirBram van Dijk 🏳️🌈 @bramvandijk.bsky.social · 12/03/2025Inspired by the work of @renskevroomans.bsky.social and @escolizzi.bsky.social on "selfish multicellularity", I made a very different type of model to replicate their results. Take that #replicationcrisis! (try it yourself here: tbb.bio.uu.nl/bvd/simulati...) 2388
Reposted by Sultan NazirBram van Dijk 🏳️🌈 @bramvandijk.bsky.social · 10/03/2025🚨 Now that @sultannazir.bsky.social has written about his work, let me try and summarise what we found. The question we worked on was inspired by Takeuchi et al. (2023) pubmed.ncbi.nlm.nih.gov/37339743/, who illustrated that (pro)phages are enriched in virulence factors compared to plasmids. [1/10] 12912
Reposted by Sultan NazirAaron Vogan @fungage-lab.bsky.social · 07/03/2025We did it! We caught Starship #transposons moving between #fungal species in the lab, including between species separated by ~100my. We think Starships are a mediator of HGT in fungi, akin to conjugative elements in bacteria. Check out the preprint. www.biorxiv.org/content/10.1... 3256136
Sultan Nazir @sultannazir.bsky.social · 07/03/2025Excited to share the first preprint from my PhD at @binfutrecht.bsky.social ! 1.5 years ago, @bramvandijk.bsky.social hired me to investigate: why do prophages preferentially carry virulence genes? Using mathematical models, we propose that spatial structure plays a key role. Here's a summary: 1/15 2269
Reposted by Sultan NazirSarah McAnulty, Ph.D. @sarahmackattack.bsky.social · 06/03/2025Okay… I gotta mute this one. It’s getting a bunch of replies about how it’s not worth explaining true things because “the right is stupid”. I want us all to reflect on the reality that calling working class Americans stupid only benefits people who stand to gain from a divided working class. 2461338
Reposted by Sultan NazirSimon van Vliet @simonvanvliet.bsky.social · 27/02/2025There is still time to apply to the Alma Dal Co School on Collective Behaviour! The deadline has been extended till March 16th. We would especially welcome applications from members of underrepresented groups. Limited travel grants are available. Apply now and join us! almadalcoschool.github.ioalmadalcoschool.github.ioHomeThe Alma Dal Co School on Collective Behaviour 088
Reposted by Sultan NazirSebastian S. Cocioba @atinygreencell.bsky.social · 30/01/2025I think the Microbial Evolution feed is working! Simply add the #MEvoSky hashtag to your post and it will aggregate to the feed linked below. Feel free to introduce yourself in context of microbial evo and adjacent topics. Experimental and directed evo welcome too! bsky.app/profile/did:... 14719
Reposted by Sultan NazirJamie Hall @jpjhall.bsky.social · 03/12/2024🆕New in @plosbiology.bsky.social: we show compensatory mutations make plasmids play Rock-Paper-Scissors and turn conjugation into a weapon🛡️💫✂️🦠 w/Rosanna Wright, Jamie Wood, @mbottery.bsky.social, @kmudz.bsky.social, @scottishwormboy.bsky.social, Ellie Harrison & @brockhurstlab.bsky.social #MicroSkyjournals.plos.orgA chromosomal mutation is superior to a plasmid-encoded mutation for plasmid fitness cost compensationPlasmids spread important traits in microbiomes but impose fitness costs on their hosts. This study of the ecological consequences of plasmid-bacterial compensatory evolution reveals benefits to bacte... 38756
Reposted by Sultan NazirMike Bottery @mbottery.bsky.social · 28/11/2024PhD studentship alert! Fully funded, co-supervised with @rokkrasovec.bsky.social and Prof Mike Bromley, University of Manchester Exploring routes of horizontal gene transfer in pathogenic fungi Exciting project, will be a bunch of fun! Come & join us 🔬 www.findaphd.com/phds/project...findaphd.com 01218
Reposted by Sultan NazirTheoretical Biology & Bioinformatics @ UU @binfutrecht.bsky.social · 25/11/2024Theoretical Biology and Bioinformatics at the protest against the budget cuts on education. This choice will cost - everyone - money in the long run. #WOinActie #wanbeleid 0143
Reposted by Sultan NazirDaniel Tamarit @danieltamarit.bsky.social · 25/11/2024Large crowds mobilising today to protest (we could not even fit in 3 different trains) in The Hague. The Dutch government wants to cut 1 billion euros to science and education. This policy will damage the country profoundly. Stop the budget cuts. Protect the future. @woinactie.bsky.social 0147
Reposted by Sultan NazirÁkos T Kovács @evolvedbiofilm.bsky.social · 21/11/2024Bluesky is emerging as the new platform for science mikeyoungacademy.dk/bluesky-is-e...mikeyoungacademy.dkBluesky is emerging as the new platform for science - Mike Young AcademyScientific Twitter is about to find its true successor. And it is not X. This, our latest release, shows that the Bluesky network of scientists is growing — and growing. 113140
Reposted by Sultan NazirAndy Lee, PhD @andylee.bsky.social · 19/11/2024coming down to the wires on #LGBTQSTEMDay to share a little starter pack of QPOC EEB scientists!! help grow this community and nominate your fave QPOC EEBer! CCmment/DM if you'd like to be added, I would love to connect :) go.bsky.app/S5fpXWm 98648
Reposted by Sultan NazirClara Torres-Barceló @clara-inrae.bsky.social · 19/11/2024Hola, I've just joined Bluesky. Follow me if you are interested in research on #phage diversity and their interaction with #plant pathogenic #bacteria. Also, more changes are coming! After a few years at @INRAE-PV I've just joined @phimresearch.bsky.social. 162
Reposted by Sultan Nazirthebobthedragqueen.bsky.social @thebobthedragqueen.bsky.social · 18/11/2024Me waiting for everyone to leave Twitter. 281768201
Reposted by Sultan NazirJoão Botelho @joaoftsbotelho.bsky.social · 10/11/2024Mobile Elements Starter Pack on BlueSky! Interested in plasmids, phages, ICEs, transposons, integrons, and all things accessory genome? Follow this curated list of researchers and labs doing exciting work in mobile elements. 2910466
Reposted by Sultan NazirMichael Landis @landismj.bsky.social · 19/11/2024Here's a starter pack for early career researchers in evolutionary biology. I prioritized the most-junior folks, and this list quickly filled up with undergrads, grad students, and postdocs. Might do another list later, but I'm tired. Have fun everyone! 🐒 #evobio go.bsky.app/MzND7nX 39265154
Reposted by Sultan NazirLior Pachter @lpachter.bsky.social · 18/11/2024Seems that @biorxivpreprint.bsky.social ought to consider adding links to @bsky.app posts given the mass transfer of scientists from Twitter to @bsky.app that is taking place. 629055