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Anuj

@rnfr2d2.bsky.social
125 followers 144 following 31 posts

CryoEM | Anaerobic structural biology | Bioenergetics | CO2 fixation and energy conservation SYNMIKRO Marburg

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Reposted by Anuj
Nika Pende @nikapende.bsky.social · 23/09/2026
So happy to see this paper finally out 🥳 it took only seven years after the first purification of archaeal peptidoglycan 🤣 Congrats to all the people involved 🥂🍾 And here is the story behind the paper: communities.springernature.com/posts/cracki...
communities.springernature.com
Cracking the Archaeal Cell Wall: How a hydrolase overturned a 50-year-old paradigm
Using bioinformatics, biochemistry, NMR, as well as the newly characterized enzyme ArmA from methanogenic archaea, we revised the existing knowledge on archaeal peptidoglycan structure. At the same ti...
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Alexey Amunts @amunts.bsky.social · 31/08/2026
A sad day. Ada's pioneering work on the ribosome changed how we understand one of the central machines of life. She is a remarkable example of curiosity and boldness in pursuing questions that seemed impossible. Her scientific courage and persistence has been an inspiration.
wis-wander.weizmann.ac.il
Prof. Ada Yonath, Nobel Laureate and a Model of Scientific Perseverance, Has Passed Away - Weizmann Wonder Wander - News, Features and Discoveries
From pursuing an impossible dream to uncovering one of the cell’s best-kept secrets and advancing the design of improved antibiotics
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 19/08/2026
Powering methanogenesis from fatty acids by a twin-heme-mediated reverse redox-loop www.biorxiv.org/content/10.64898/20…
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Ben Engel @cellarchlab.com · 07/08/2026
One month left to apply!! 🧪 @biozentrum.unibas.ch seeks a group👩‍🔬 exploring molecular questions relevant to climate 🌍, including biogeochemical cycles (e.g., carbon, nitrogen) ♻️, bioenergetic energy conversion (e.g., photosynthesis, chemosynthesis) ☀️⚗️, and the adaptation to environmental change 🌊🌡️🦠🌾
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Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 05/08/2026
PLEASE SHARE! New job openings in my lab @zmbp-tuebingen.bsky.social. We have a broad interest into the mechanistic basis of how molecular complexes are rewired during cellular development in plants and during invasion by pathogens. 🌱🍄🔬 See details below 👇 #PlantSciJobs
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Schuller Jan @schullerjm.bsky.social · 21/07/2026
We currently have an opening for a PhD position in the lab. If you are interested in pursuing some serious structural biology of photosynthetic and chloroplast processes please apply. Prerequisite is previous experience in cryoEM and/or phototrophs. stellenangebote.uni-marburg.de/jobposting/2...
stellenangebote.uni-marburg.de
Doctoral and Postdoctoral Researcher Positions in the Cluster of Excellence ‘Microbes for Climate’
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Florent Waltz @florentwaltz.bsky.social · 27/07/2026
This story is now published in @natplants.nature.com ! 🎉🎩 Check out the final article here: nature.com/articles/s41477-026-02361-1 Very similar to the original bioRxiv preprint, with the addition of some cool polysome analysis (in the supplementals)! Thanks and congrats to everyone involved! 🙏
nature.com
Chloroplast-encoded small subunit extensions reshape the Chlamydomonas chlororibosome - Nature Plants
Using in situ cryo-electron tomography, researchers found a unique ‘arm’ domain on the small subunit of Chlamydomonas chlororibosomes. This discovery suggests that chlororibosome structure is more evo...
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Sven T. Stripp @stripplab.bsky.social · 23/07/2026
Who's interested in time-resolved serial crystallography on [FeFe]-hydrogenase?? Check out Moritz' new preprint: www.biorxiv.org/content/10.6...
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Moritz Senger @moritzsenger.bsky.social · 23/07/2026
The title says it all. Check out our preprint 👇👇👇👇
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Nature @nature.com · 14/07/2026
Nature research paper: Architecture of the 8 MDa Hdr–Vhu–Fwd super-assembly in class I methanogens go.nature.com/4h34dRD
go.nature.com
Architecture of the 8 MDa Hdr–Vhu–Fwd super-assembly in class I methanogens - Nature
The structure of the Hdr–Vhu–Fwd super-assembly reveals a lineage-specific and modular 8 MDa complex with the ability to adapt to diverse anaerobic niches.
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Roland Hatzenpichler @environmicrobio.bsky.social · 09/07/2026
Awesome work to determine the structure of a freakin 8MDa enzyme complex with over 600 FeS clusters! Sophia won the poster prize at the recent GRC C1 👏 www.nature.com/articles/s41...
nature.com
Architecture of the 8 MDa Hdr–Vhu–Fwd super-assembly in class I methanogens - Nature
The structure of the Hdr–Vhu–Fwd super-assembly reveals a lineage-specific and modular 8 MDa complex with the ability to adapt to diverse anaerobic niches.
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Anuj @rnfr2d2.bsky.social · 08/07/2026
Mother of all electron-bifurcating complexes is here! Congratulations to Sophia @sophia-pa.bsky.social for discovering and determining the structure of this mega assembly! You put in so much effort to get this paper published. I am so happy and proud of you and your achievement!
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trisre.bsky.social @trisre.bsky.social · 06/07/2026
1/ Happy to share our preprint! The Mtr complex catalyses the second-to-last step of the methanogenesis and is an essential bioenergetic machine in most methanogenic archaea. Anaerobic cryo-EM of Mtr reveals a nitrogenase-like metallocluster bound at its active site! www.biorxiv.org/content/10.6...
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Anuj @rnfr2d2.bsky.social · 27/06/2026
Check out this latest work from @gyanaprakash.bsky.social on the structure of an electron bifurcating/confurcating hydrogenase from cyanobacteria!
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Silvia Ramundo @sramundo.bsky.social · 24/06/2026
1/7 New preprint: we found that Chlamydomonas carries a giant and unexpectedly elaborate chloroplast RNA polymerase with 12 previously unknown subunits, overturning the idea that the complexity of this organellar enzyme emerged during plant terrestrialization! www.biorxiv.org/content/10.6...
biorxiv.org
The structure of a 2-MDa chloroplast RNA polymerase reveals unexpected evolutionary complexity
Transcription in chloroplasts depends on the Plastid-Encoded RNA polymerase (PEP), a bacterial-derived enzyme whose catalytic core remains encoded by the highly reduced genome inherited from the cyano...
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Ville Kaila @kailalab.bsky.social · 23/06/2026
I’m extremely grateful for the ERC Advanced Grant – with the awarded 2.5 Mio EUR, we will tackle how electrodynamics effects control the energy currents of life. 🎉 🎉 🎉 www.su.se/english/news...
su.se
ERC Advanced Grant to research on the processes that power life - Stockholms universitet
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Svetlana Dodonova @dodonova-sveta.bsky.social · 19/06/2026
Excited to share our new preprint! 🧬❄️ by brilliant @mdreimann.bsky.social and great collaborators! Using cryo-ET&EM, we reveal archaeal chromatin in a near-native state: variable-beads-on-a-string fibers shaped by growth phase and histone composition #ArchaeaSky www.biorxiv.org/content/10.6...
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Silvia Ramundo @sramundo.bsky.social · 12/06/2026
Do you enjoy the thrill of discovery? Does this photo give you good vibes? Then you might be the right person to join our lab! Current projects range from chloroplast transcription to thylakoid membrane remodeling & we would be happy to welcome bright and motivated people at all career stages!
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Elisabeth Bobkova @bobez.bsky.social · 01/06/2026
Very happy to share my first preprint from my PhD 🎉 doi.org/10.64898/202... We develop an αHL-based framework to engineer and quantify selective diffusion across synthetic membranes using controlled nanopore chemistry. 1/7
doi.org
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Sven T. Stripp @stripplab.bsky.social · 28/05/2026
Cool to see our recent paper among the "Editors' Highlights" in @natcomms.nature.com that "aim to showcase the 50 best papers recently published" 🥰 www.nature.com/collections/...
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Ville Kaila @kailalab.bsky.social · 09/05/2026
Check out our latest paper – today out in JACS - on proton gates in the antiporter modules of Complex I! So proud of my amazing lab – Sofia Badolato, Sarah Rossmann & Hyunho Kim – and thank you @kawresearch.bsky.social for long-term support of our work. pubs.acs.org/doi/10.1021/...
pubs.acs.org
Molecular Principles of Gating Proton Transport in the Antiporter Modules of Respiratory Complex I
The respiratory Complex I is a highly intricate redox-driven proton pump that powers oxidative phosphorylation across all domains of life. Yet, despite major efforts, its long-range energy transductio...
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Sven T. Stripp @stripplab.bsky.social · 06/05/2026
Endlich wieder Massephase! 🙏🏻 Hier der Presseartikel für unsere neue Publikation: www.uni-potsdam.de/de/nachricht... @unipotsdam.bsky.social @unimarburg.bsky.social @schullerjm.bsky.social @natcomms.nature.com
uni-potsdam.de
Biomasse aufbauen – Membrankomplex hilft Steinfresser-Mikroorganismen, Kohlendioxid umzuwandeln
Medieninformation 06-05-2026 / Nr. 035
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Sven T. Stripp @stripplab.bsky.social · 06/05/2026
Now online with @natcomms.nature.com 🤩 doi.org/10.1038/s414...
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Altegoerlab @faltegoer.bsky.social · 21/04/2026
We just received funding for a 2yr postdoc position on cryoEM of fungal gpcrs. Official call will open soon. Contact me if you‘re interested!
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Ben Engel @cellarchlab.com · 14/04/2026
Across scales from cells🦠 to atoms⚛️ – We reveal how anaerobic #bacteria break down very stable aromatic compounds found e.g. in oil spills 🛢️ #Bioremediation #TeamTomo 🧪 🧶🧬 🔬 Awesome collab with Lena, Matthias, @schullerjm.bsky.social @rnfr2d2.bsky.social @tomaspascoa.bsky.social @tamb-o.bsky.social
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Ben Engel @cellarchlab.com · 14/04/2026
Thanks for the fun collaboration into this fascinating “oil eating” biomachine. I learned a lot! 🧪 #TeamTomo
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Tomas Pascoa @tomaspascoa.bsky.social · 14/04/2026
1/ Excited to share our preprint! 🥳 Degradation of aromatic compounds, including BTEX pollutants, requires highly endergonic aromatic ring reduction. Using #cryoEM and in situ #cryoET, we show how BCRII couples electron bifurcation modules in one giant redox machine www.biorxiv.org/content/10.6...
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Anuj @rnfr2d2.bsky.social · 14/04/2026
How do “LEGO-like” electron-bifurcating modules combine to drive degradation in BTEX-contaminated ecosystems? Check out our latest preprint, where we use cryo-EM and cryo-ET to reveal how the 1 MDa BCRII complex powers extremely endergonic aromatic ring reduction. www.biorxiv.org/content/10.6...
biorxiv.org
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Marie C. Schölmerich @mschoelmerich.bsky.social · 11/04/2026
New preprint alert 🚨: Who actually drives methane production in anoxic sediments 🧬🔥? We point to a transcriptionally dominant 🦠 clade: VadinHA17. shorturl.at/Rijc0 @bledinadede.bsky.social @taylorpriest.bsky.social
biorxiv.org
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Trends in Microbiology @cp-trendsmicrobiol.bsky.social · 11/04/2026
Breathing both ways: simultaneous aerobic–anaerobic respiration in microbes
dlvr.it
Breathing both ways: simultaneous aerobic–anaerobic respiration in microbes
Microorganisms have historically been classified as obligate aerobes or anaerobes, facultative anaerobes, or microaerophiles, reflecting differences in respiratory strategies dictated by the use of oxygen and alternative electron acceptors. Recent discoveries provide evidence that a deviant strategy, the concurrent reduction of oxygen and other electron acceptors, is more widespread than previously thought. Such co-respiring bacteria employ hybrid metabolic strategies that extend models of electron acceptor use. In this review, we investigate mechanisms of co-respiration, summarize the biochemical components enabling parallel electron flow, and discuss the regulation of aerobic and anaerobic pathways under changing redox conditions. We also examine the evolutionary context of these strategies during the rise of oxygen on early Earth and outline experimental approaches needed to resolve co-respiration in individual cells.
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Alexey Amunts @amunts.bsky.social · 07/04/2026
65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵
langtaosha.org.cn
A Supercomplex Incorporating Both Electron Transport Chain and ATP Synthase
The mitochondrial oxidative phosphorylation system powering most aerobic organisms is typically depicted as two spatially segregated machineries(1): electron transport chain complexes I-IV (ETC CI-CIV
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Anuj @rnfr2d2.bsky.social · 04/04/2026
Highly recommended! Very cool science and great projects!
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Anuj @rnfr2d2.bsky.social · 29/03/2026
Check out the latest work on PSI:Cytc6 complex from Chlamy! many congratulations @gyanaprakash.bsky.social and @schullerjm.bsky.social #cryoem
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Anuj @rnfr2d2.bsky.social · 27/03/2026
I am truly honoured and delighted to receive the GBM #PhDAward from @gbmev.bsky.social Grateful to @schullerjm.bsky.social and Prof. Volker Müller for their continuous support and guidance! www.uni-marburg.de/en/prfolder-...
uni-marburg.de
GBM PhD Prize 2026 awarded to Marburg Researcher Anuj Kumar
Award honors outstanding dissertation on CO₂ fixation and energy conservation in microorganisms
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Sven T. Stripp @stripplab.bsky.social · 24/03/2026
Carbonic anhydrase catalyses the interconversion of CO2 and HCO3- and helps increasing the net-CO2 concentration inside cells. Why? CO2-reducing enzymes like RuBisCO are notoriously slow and ineffective. However, import of HCO3- is typically coupled to ATP consumption...
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Ben Engel @cellarchlab.com · 12/03/2026
This is a proud and exciting moment for me. Manon continues to redefine our understanding of pyrenoid biology, as she pushes the frontiers of #TeamTomo straight into the natural world around us 🌍🌊🌾🔬 Her new group at @gmivienna.bsky.social will explore fresh and impactful questions. Check it out! 🧪👩‍🔬
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Ricardo D. Righetto @lifeonthewedge.bsky.social · 09/03/2026
Stunning video installation by Isabell Bullerschen featuring our T. kivui #CryoET data 🧡 On view until April 19th at the HEK in #Basel! hek.ch/en/program/e...
Still of a video installation by Isabell Bullerschen showing segmentation of a tomogram depicting T. Kivui bacteria.Still of a video installation by Isabell Bullerschen showing segmentation of a tomogram depicting T. Kivui bacteria.Still of a video installation by Isabell Bullerschen showing segmentation of a tomogram depicting T. Kivui bacteria.Still of a video installation by Isabell Bullerschen showing segmentation of a tomogram depicting T. Kivui bacteria.
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Johannes Rebelein @rebeleinlab.bsky.social · 06/03/2026
A childhood dream has come true – I was appointed Full Professor for Sustainable Biotechnology at the University of Düsseldorf @hhu.de : tinyurl.com/f43s74hp and as Director of the Institute for Molecular Enzyme Technology (IMET, www.iet.uni-duesseldorf.de/en/) at FZ Jülich @fz-juelich.de .
tinyurl.com
Mathematisch-Naturwissenschaftliche Fakultät
Heute ernannte Rektorin Prof. Dr. Anja Steinbeck den Biotechnologen Dr. Johannes Rebelein zum W3-Professor für Nachhaltige Biotechnologie. Rebelein wird damit auch Direktor des Instituts für Molekular...
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Sven T. Stripp @stripplab.bsky.social · 04/03/2026
Happy to share our new paper on proton transfer in metalloenzymes, out now in @pccp.rsc.org! Exploiting crystallography, electrochemistry, FTIR spectroscopy, and QM calculations we identified a Zundel ion in the catalytic proton tranfer pathway of [FeFe]-hydrogenase. doi.org/10.1039/D5CP...
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Arjen Jakobi @cryotud.bsky.social · 27/02/2026
New preprint by @alok-bharadwaj.bsky.social explaining the workings of SURFER, a simple tool to segment membrane, micelle or nanodisc densities in cryoEM maps. Try it via the @chimerax.ucsf.edu ToolShed: cxtoolshed.rbvi.ucsf.edu/apps/chimera... Despite LocScale in the name, it works on any map.
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Ben Engel @cellarchlab.com · 10/02/2026
At long last, the Chlamy chloroplast ribosome hat 🎩 (now renamed the arm 💪) is here to say hello👋! We first spotted this extended structure in green algae a decade ago, and @florentwaltz.bsky.social did beautiful work bringing it into focus! #CryoEM ❄️ #TeamTomo 🔬 #PlantScience 🌾 #ProtistsOnSky 🧪
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Sven T. Stripp @stripplab.bsky.social · 25/01/2026
This is what I call a booster 🚀: Milton and colleagues use a novel, bipyridium-type redox mediator to increase the electrochemical H2 evolution activity of [FeFe]-hydrogenase by a factor of 10 compared to previous protocols. pubs.acs.org/doi/full/10....
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Andrew Ellisdon @drellisdon.bsky.social · 09/01/2026
An incredibly challenging single particle cryo-EM structure. Capturing both the N and C termini was difficult enough, but the project required a major effort to resolve the full length protein structure to capture the overall architecture of the KICSTOR-GATOR1 complex. Well worth it in the end!
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Sven T. Stripp @stripplab.bsky.social · 06/11/2025
I am very excited to share our new preprint - "A Zundel Ion in the Catalytic Proton Transfer Pathway of [FeFe]-Hydrogenase" - for which we revisited an older theory of ours, and came to surprising conclusions... 🧵 doi.org/10.26434/che...
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Cornelius Gati @gati.bsky.social · 05/11/2025
Excited to share our latest @nature.com: How does naloxone (Narcan) stop an opioid overdose? We determined the first GDP-bound μ-opioid receptor–G protein structures and found naloxone traps a novel "latent” state, preventing GDP release and G protein activation.💊🧪 🧵👇 www.nature.com/articles/s41...
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Johannes Rebelein @rebeleinlab.bsky.social · 23/10/2025
Our latest work on the nitrogenase-like methylthio-alkane reductase, which specifically reduces reduces carbon-sulfide bonds is now out @natcatal.nature.com: doi.org/10.1038/s419.... We find for the first time large #nitrogenase metalloclusters (P- and L-cluster) outside nitrogenases.
doi.org
Methylthio-alkane reductases use nitrogenase metalloclusters for carbon–sulfur bond cleavage - Nature Catalysis
Methylthio-alkane reductases are recently discovered enzymes that can produce methanethiol and small hydrocarbons from methylated sulfur compounds. Now the cryo-EM structure of a methylthio-alkane red...
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Anuj @rnfr2d2.bsky.social · 23/10/2025
Great work from the lab of @rebeleinlab.bsky.social ! Now out in @natcatal.nature.com
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Roland Hatzenpichler @environmicrobio.bsky.social · 16/10/2025
New preprint: Methyl co-enzme M reductase encoding (potentially methanogenic) Thermoproteota are widespread and transcriptionally active in diverse anoxic ecosystems! @dr-zj.bsky.social, Matthew Kollom & @emileyeloe-fadrosh.bsky.social www.biorxiv.org/cgi/content/... Funded by the DOE BER program.
A diagram showing the environmental distribution of methyl coenzyme M reductase encoding Thermoproteota.
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giovanniconsoli.bsky.social @giovanniconsoli.bsky.social · 11/10/2025
Have you ever looked at the night sky and wondered if there’s a chlorophyll f in the reaction centre of Photosystem I from far-red light adapted cyanobacteria? 🦠 Well, we did (don’t judge) and the work that followed is now out as a First Release in @science.org www.science.org/doi/10.1126/...
science.org
Locating the missing chlorophylls f in far-red photosystem I
The discovery of chlorophyll f-containing photosystems, with their long-wavelength photochemistry, represented a distinct, low-energy paradigm for oxygenic photosynthesis. Structural studies on chloro...
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cryoEM papers @cryoempapers.bsky.social · 09/09/2025
Cryo-EM structure of Chlamydomonas Photosystem I complexedwith the alternative electron donor cytochrome c6 www.biorxiv.org/content/10.1101/2025.09.08.674899v1 #cryoEM
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