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Ohad Roth

@ohadroth.bsky.social
117 followers 197 following 13 posts

Postdoc @SorekLab, Weizmann Institute of Science. Alumnus of the Weinstain and Shani labs, Tel Aviv University.

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Reposted by Ohad Roth
Gal Ofir @galofir.bsky.social · 08/10/2026
A new plant-bacteria immunological connection in the first preprint of our group at @mpi-bio-fml.bsky.social @plantevolution.bsky.social! Straight from the top of Mt. Olympus ⛰️🦅 Led by Eirik @eiriklag.bsky.social, in collaboration with @geminiteamlab.bsky.social www.biorxiv.org/content/10.6...
Our preprint with the view from the top of the Olympus in the background
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Milena Malisic @milenamalisic.bsky.social · 08/10/2026
🌱🦠 Excited to share part of my PhD work @mpipz.bsky.social with @hotvegetables.bsky.social as co-first, in collab with @leibnizipk.bsky.social and @ceplas.bsky.social. We found that Arabidopsis and its microbiota work together to adapt iron acquisition to soil pH. www.cell.com/cell/fulltex... 🧵
cell.com
Arabidopsis uses distinct coumarins and bacterial pathways for pH-adaptive iron acquisition
Arabidopsis coordinates Fe acquisition with its root microbiota by releasing distinct coumarin chemotypes in response to environmental pH. These root-exuded specialized metabolites interact with root-...
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Adam Bentham @adamrbentham.bsky.social · 30/09/2026
🚨 Please share! 🚨 I'm recruiting a fully funded 4-year Gatsby Sainsbury PhD studentship at Durham! 🌱🤖 Designing plant immune receptors from scratch, combining AI protein design with structural biology and plant immunity. If you're interested please get in touch! benthamlab.org shorturl.at/U2PdV
benthamlab.org
Bentham Lab — Durham University
Bentham Lab, Centre for Programmable Biological Matter, Durham University. Structural biology and de novo protein design applied to host-pathogen interactions, plant immunity, and neglected tropical d...
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Danve Castroverde @danvec.bsky.social · 16/09/2026
Transcriptional activation of plant immunity by salicylic acid www.nature.com/articles/s41...
nature.com
Transcriptional activation of plant immunity by salicylic acid - Nature
A mechanistic basis for how the hormone salicylic acid promotes transcriptional activation during plant immune responses is described.
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Michael Hothorn @structplantbio.bsky.social · 11/09/2026
Nice work by @cellsensing.bsky.social Glycan recognition by a plant damage-sensing immune receptor www.science.org/doi/10.1126/...
science.org
Glycan recognition by a plant damage-sensing immune receptor
Pathogens target and degrade the extracellular matrix surrounding plant cells. A central question is how cell wall-derived damage-associated molecular patterns (DAMPs) are recognized and integrated to...
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Reposted by Ohad Roth
Nature Plants @natplants.nature.com · 15/09/2026
Last talk today at #PPRM2026 by Moutassem Omary (Zipfel lab) illustrates the modularity and flexibility of PRR signalling: after redundant receptors, peptides and antipeptides, here come the secreted LRR domains that can basically replace BAK1 and interfere with various pathways. #PlantScience
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François Rousset @francoisrousset.bsky.social · 08/09/2026
🚨 We are excited to share the first preprint of our lab ! We discovered an NADase enzymatic domain in bacterial immunity and in the human protein TEP1. www.biorxiv.org/content/10.6...
biorxiv.org
A widespread NADase domain links bacterial immunity with human TEP1
Recent discoveries on bacterial immunity have revealed that several protein domains involved in anti-phage defense are conserved in eukaryotes, such as SIRim, TIR, PNP and gasdermin. Bacterial immune ...
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BejaLabTechnion @bejalab.bsky.social · 08/09/2026
Functional chimeric mRNAs encode proteins in mammalian immunity www.nature.com/articles/s41...
nature.com
Functional chimeric mRNAs encode proteins in mammalian immunity - Nature
Inflammation induces interchromosomal DNA interactions that bring parent genes into close proximity, facilitating the formation of chimeric mRNAs that encode physiologically relevant, functional prote...
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Ohad Roth @ohadroth.bsky.social · 07/09/2026
If you are here and interested in this research or would like to discuss related topics, please don't hesitate to reach out 😊
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Ohad Roth @ohadroth.bsky.social · 07/09/2026
I'll be presenting our work revealing a mechanism that allows bacterial pathogens to suppress plant TIR immune signaling. More details can also be found in our recently posted preprint: www.biorxiv.org/content/10.6...
biorxiv.org
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Ohad Roth @ohadroth.bsky.social · 07/09/2026
At the peaceful library of the University of East Anglia in Norwich, looking forward to hearing about the latest advances in plant pathology and getting to know the people behind the work at #PPATH2026, starting tomorrow!
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Caetano Reis e Sousa @reisesousalab.bsky.social · 19/08/2026
Hope you enjoy this short piece, which came out yesterday. Some thoughts I’ve been musing on for a while about why adaptive immunity evolved. Read it for free at rdcu.be/fAO5P
rdcu.be
Why adaptive immunity?
Nature Reviews Immunology - Adaptive immunity is indispensable to vertebrates, yet most living organisms defend themselves perfectly well without it. Here, I ask why somatically diversified antigen...
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Jason Nomburg @jnoms.bsky.social · 22/07/2026
Happy to share the first preprint out of the Nomburg lab! Many aspects of cellular immunity are shared across the tree of life. Here, we show that some of these conserved aspects of cellular immunity are mirrored by conserved effectors of immune antagonism. Thread below! 1/15
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Josep Mercadal @josepmercadal.bsky.social · 21/07/2026
Our work on pattern formation in fossil and extant liverworts is out! @dev-journal.bsky.social Check it out if you are interested in fossils, evo-devo, and how mathematical modeling can help us understand the evolution of developmental processes! 🌿🧪 Thread ⬇️
journals.biologists.com
Lateral inhibition governs ancestral cellular patterning in fossil and extant liverworts
Highlighted Article: Comparative and mathematical analyses reveal that oil body cell patterning in fossil and extant liverworts is consistent with a local activation-lateral inhibition mechanism, poin...
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Osterman Ilya @ostermanilya.bsky.social · 13/07/2026
🚨 We're hiring! My new lab at EMBL Hamburg is looking for a Research Technician. I'm looking for someone excited by phages, metabolism, enzymes, structural biology and bacterial immunity—if you know the right person, please share this post!🧵⬇️ Apply here: embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
embl.wd103.myworkdayjobs.com
Research Technician (Osterman Group – Metabolism-driven immunity)
EMBL Hamburg / CSSB The European Molecular Biology Laboratory (EMBL) is Europe’s flagship life sciences organization, with more than 110 independent research groups across Heidelberg, Hamburg, Grenobl...
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bioRxiv Plant Bio @biorxiv-plants.bsky.social · 10/07/2026
Computational design of de novo integrated domains enables rational control of pathogen effector recognition in plant NLR immune receptors. www.biorxiv.org/content/10.64898/20…
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bioRxiv Plant Bio @biorxiv-plants.bsky.social · 11/07/2026
Hormone-dependent receptor docking controls calcium channel activity in plants www.biorxiv.org/content/10.64898/20…
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Osterman Ilya @ostermanilya.bsky.social · 09/07/2026
Excited to share that our Metis story is now published in Science! 🎉 Bacteria can sense phage-induced degradation of their genome and activate immunity. Many thanks to everyone who contributed to this work. 📄 www.science.org/doi/10.1126/... More details in my earlier thread 🧵⬇️
science.org
Bacteria sense virus-induced genome degradation via methylated mononucleotides
Phages often degrade the genome of their bacterial host to individual nucleotides. Here we describe Metis, a bacterial defense system that directly senses phage-mediated host genome degradation. Metis...
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 07/07/2026
It takes two: A Widespread Temperate Bacteriophage Contributes to Regulation of the Type III Secretion System in Pseudomonas syringae www.biorxiv.org/content/10.64898/20…
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Nick Talbot @talbotlabtsl.bsky.social · 06/07/2026
The mycobiont of the lichen Xanthoria parietina produces the siderophore ferrichrome which enables iron acquisition and nutrient exchange with its algal photobiont. Great collaboration with my group & @metalichen.bsky.social led by Hubertus Haas 👇 www.nature.com/articles/s41...
nature.com
Siderophore production by the lichen fungus Xanthoria parietina supports its algal symbiont - Nature Communications
The mechanisms underlying the adaptation of lichens to nutrient-poor environments are poorly understood. Here, Happacher et al. show that a globally distributed lichen fungus produces an iron-scavengi...
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Richard Sever @richardsever.bsky.social · 06/07/2026
“move from preprint to peer-reviewed publication leaves the central claims of most abstracts intact, indicating preprints are a reliable source…papers that were never posted as preprints were retracted at roughly twice the rate of those that were…” www.biorxiv.org/content/10.6...
biorxiv.org
Tracking claim changes from preprint to publication across 72,644 biomedical studies using large language models
Preprints now disseminate a large share of biomedical research before peer review. Because they have not yet passed peer review, some scientists regard preprint claims as unverified or potentially unr...
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Danve Castroverde @danvec.bsky.social · 03/07/2026
Surface immune signaling unlocks NLR activation through mRNA alternative splicing www.science.org/doi/10.1126/...
science.org
Surface immune signaling unlocks NLR activation through mRNA alternative splicing
Plants activate pattern-triggered immunity (PTI) and effector-triggered immunity (ETI) to combat pathogens. However, how these systems coordinate immune activation while preventing autoimmunity remain...
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Reposted by Ohad Roth
Nature Biotechnology @natbiotech.nature.com · 29/06/2026
Experiment-guided AlphaFold3 resolves measurement-consistent protein ensembles - @istaresearch.bsky.social @alex-bronstein.bsky.social @paulschanda.bsky.social @sankethvedula.bsky.social www.nature.com/articles/s41...
nature.com
Experiment-guided AlphaFold3 resolves measurement-consistent protein ensembles - Nature Biotechnology
A generative model using AlphaFold3 as prior infers protein conformational ensembles consistent with measured experimental data.
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Şuayb Üstün @suaybuestuen.bsky.social · 25/06/2026
I do not want our preprints being „ranked“ in the future by AI. We preprint to foster #openscience sharing it with our community and to make the research of early careers more visibile to help them for future positions etc. We do not need more competition bias and pressure.
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Nature Microbiology @natmicrobiol.nature.com · 24/06/2026
Out Now! Phages tame plant pathogens #MicroSky
go.nature.com
Phages tame plant pathogens
Nature Microbiology, Published online: 23 June 2026; doi:10.1038/s41564-026-02395-3Predicting infection heterogeneity requires looking beyond the host. Phage–bacteria coevolution in tomato fields maintains diverse bacterial strategies and explains uneven disease occurrence across plant populations.
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Jessica Lee Erickson @ericksonlab.bsky.social · 23/06/2026
New Preprint! We identified 20 new type II-secreted effectors from Xanthomonas euvesicatoria and show that they help bacteria feed and remodel plant cell walls during infection. Proud of my team at #ZMBP and collaborators for making this possible! www.biorxiv.org/content/10.6...
biorxiv.org
Defining the Xanthomonas euvesicatoria type II-secreted effector arsenal: core nutritional functions and effector diversity
The type II secretion (T2S) system is conserved across the Xanthomonas lineage, yet its contributions to pathogenicity and secreted protein repertoires are poorly defined. We demonstrate that T2S syst...
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Sorek Lab @soreklab.bsky.social · 17/06/2026
Preprint: Plant pathogens cleave 2’cADPR to suppress TIR immune signaling Inspired by knowledge on how phages inhibit bacterial immunity, we now show that disease-causing bacteria inhibit plant immunity in a similar way. A 🧵 www.biorxiv.org/content/10.6...
biorxiv.org
Plant pathogens cleave 2'cADPR to suppress TIR immune signaling
Small molecules produced by TIR (Toll-interleukin-1 receptor) domains are essential for plant immune signaling. A central TIR-derived signal is 2'cADPR, a cyclic ADP-ribose (ADPR) molecule that is gen...
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Ohad Roth @ohadroth.bsky.social · 17/06/2026
Thanks Jeremy :)
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Ohad Roth @ohadroth.bsky.social · 17/06/2026
Thanks Dor :)
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Ohad Roth @ohadroth.bsky.social · 17/06/2026
Thanks Ziv!
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Ohad Roth @ohadroth.bsky.social · 16/06/2026
Thanks Moutasem :)
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Ohad Roth @ohadroth.bsky.social · 16/06/2026
Thanks Bohdana :)
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Ohad Roth @ohadroth.bsky.social · 16/06/2026
Thanks Ilya :)
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Ohad Roth @ohadroth.bsky.social · 16/06/2026
Special thanks to my co-authors Talya and @amitaig.bsky.social for contributing to the phage experiments and biochemistry, and to Aaron, @federicalocci.bsky.social, Silvina, and Elke in MPIPZ who helped with plant experiments and made my trips to Cologne both productive and enjoyable.
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Ohad Roth @ohadroth.bsky.social · 16/06/2026
A detailed thread soon, but first, thanks to all my great colleagues and friends in @soreklab.bsky.social, the Schulze-Lefert lab, and @parkergroup.bsky.social (@mpipz.bsky.social) for their support and many fruitful discussions.
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Ohad Roth @ohadroth.bsky.social · 16/06/2026
How do pathogens disarm plant immunity? We discovered a widespread strategy used by plant bacterial pathogens: they directly cleave a conserved immune signaling molecule produced by plant immune receptors. www.biorxiv.org/content/10.6...
biorxiv.org
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Kranzusch Lab @kranzuschlab.bsky.social · 12/06/2026
How do human cells defend against viruses? @sgfern.bsky.social discovers that human immune proteins named ISGs target ancient features of replication shared between animal and bacterial viruses – opening analysis of human immunity to the power of bacterial genetics www.biorxiv.org/content/10.6...
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parkergroup.bsky.social @parkergroup.bsky.social · 09/06/2026
TIRs are key regulators of plant immunity, but the role of conserved TIR-only proteins has remained unclear. Here, we compare TIR-only proteins from Arabidopsis and barley and show that they share a conserved role in plant immunity. www.biorxiv.org/content/10.6...
biorxiv.org
Conserved TIR-only proteins drive transcriptional defense and basal immunity in dicot and monocot plants
Toll/interleukin-1/resistance (TIR) domain NADase enzymes signal in plant immunity by producing ribosylated nucleotide second messengers which activate EDS1 dimer-helper NLR pathways to restrict patho...
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Romi Hadary @romihadary.bsky.social · 03/06/2026
Excited to see our work out in @natmicrobiol.nature.com! We uncovered broad functional diversity within phage sponge families🧽. Huge thanks to all coauthors and brilliant collaborators @kranzuschlab.bsky.social @reneechang.bsky.social ! www.nature.com/articles/s41...
nature.com
Functional diversity of phage sponge proteins that sequester host immune signals - Nature Microbiology
A functional screen reveals phage sponge proteins that bind Pycsar, Thoeris and CBASS signalling molecules to inhibit bacterial immunity.
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Osterman Ilya @ostermanilya.bsky.social · 30/05/2026
Our aRES story is finally out 😀 Beyond what was reported in the preprint, we found that aRES is activated by direct binding of the phage DNA polymerase. Another NAD-degrading defense system — and multiple phage strategies to overcome it. www.sciencedirect.com/science/arti...
sciencedirect.com
Bacterial defense via RES-mediated NAD+ depletion is countered by phage phosphatases
Many bacterial defense systems restrict phage infection by breaking down the molecule nicotinamide (Nam) adenine dinucleotide (NAD+) into adenosine di…
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Osterman Ilya @ostermanilya.bsky.social · 28/05/2026
🚨After 4 fantastic years in the Sorek lab @soreklab.bsky.social, I’ll be starting my own group at EMBL @embl.org bl.org Hamburg. www.embl.org/groups/oster... Metabolism-driven immunity: phages, metabolites, and discovery of new enzymes, molecules, and pathways 🦠🧬
embl.org
Osterman Group – Metabolism-driven immunity
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Sorek Lab @soreklab.bsky.social · 21/05/2026
A nice piece at @science.org covers the exploding field of bacterial immunity, and how it led to the understanding that components of the human immune system evolved from bacterial defenses against phage www.science.org/content/arti...
science.org
Ancient wars between microbes gave us key immune defenses
A better understanding of battles between bacteria and viruses could inspire new medicines
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Nature Biotechnology @natbiotech.nature.com · 05/05/2026
A single-cell screening platform accelerates functional genetics in plants - @sattelylab.bsky.social go.nature.com/4n8wzLv
go.nature.com
A single-cell screening platform accelerates functional genetics in plants - Nature Biotechnology
A pooled, cell-based, genetic screening platform in plants is used for the functional analysis of cytokinin signaling proteins.
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Ohad Roth @ohadroth.bsky.social · 24/04/2026
Inspired by bacterial and plant immunity, Bohdana set out to identify catalytic activities in animal TIR proteins. She shows that TIR domain of human TLR4 is an enzyme that produces the signaling molecule cyclic ADP-ribose (cADPR). More in her thread and preprint, including on Viridiplantae TIRs.
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