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Malcolm 朝精 Barrett

@malcolmbarrett.malco.io
5.3K followers 834 following 770 posts

Ph.D., epidemiology. research software engineer @ Stanford Health Policy. living in Ann Arbor. open-source data science. causal inference. doing poems on aircrafts. approximately Bayesian. formerly Posit, Apple, AmeriCorps. 心を燃やせ。sic semper tyrannis.

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Reposted by Malcolm 朝精 Barrett
Per Engzell @pengzell.bsky.social · 5h
Two people at a cocktail party. One says: "I'm a fiction writer in the causal inference genre."
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Andreas Brandmaier @brandmaier.bsky.social · 28/09/2026
Ever looked at your graph and thought: this needs a more dramatic exit strategy? Make your R base plots self-destruct with style. If you must, download here: github.com/brandmaier/d... #RStats #DataVisualization #RProgramming #DataScience #OpenSource #AcademicHumor #noAI
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 29/09/2026
meanwhile Phase 1 Phase 2 Phase 3 LLMs ? AGI
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Jacob Kresovich @jkresovich.bsky.social · 24/09/2026
I get that AI in academia/research is a little controversial, but personally, it has greatly improved my ability to produce low-impact science.
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weeder @weeder.bsky.social · 24/09/2026
God, grant me the courage to change the things I can and incredible new powers to change the things I can't.
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Emil Hvitfeldt @emilhvitfeldt.bsky.social · 23/09/2026
I think I have cracked one of the final things that kept people in keynote over quarto revealjs slides. Introducing ✨️ quarto-revealjs-magic-move ✨️ emilhvitfeldt.com/post/quarto-... #quarto #slidecrafting
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Brady West @bradytwest.bsky.social · 22/09/2026
The University of Michigan National Survey Panel (M-Panel) is now openly accepting questionnaire content from researchers. Would you like to ask questions to a national probability-based panel of adults in the U.S., with an oversample from Michigan? Tap below! mpanel.isr.umich.edu/for-research...
mpanel.isr.umich.edu
For Researchers | M-Panel: National Survey PanelFor Researchers – M-Panel: National Survey Panel
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Mikhail Popov @mpopov.com · 21/09/2026
My team (Product Analytics) is hiring a Sr. Data Scientist to help guide Wikipedia’s anti-abuse and security strategy
job-boards.greenhouse.io
Senior Data Scientist, Safety & Security
Remote
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Reposted by Malcolm 朝精 Barrett
Catherine Rampell @crampell.bsky.social · 20/09/2026
It really is striking how many authoritarian states have ended up in this exact same place, where the leader seizes control of scientific inquiry. Lysenkoism in the Soviet Union, Aryan Physics in the Third Reich, Great Leap Forward (also related to Lysenko) in China.
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 20/09/2026
The perfect notebook would fix me
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Reposted by Malcolm 朝精 Barrett
The Onion @theonion.com · 18/09/2026
Trans Teen Hatches Nefarious Plot To Undergo Years Of Medical Treatments And Counseling To Win At Swimming theonion.com/trans-teen-hatches-nef…
Trans Teen Hatches Nefarious Plot To Undergo Years Of Medical Treatments And Counseling To Win At Swimming
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 17/09/2026
This is giving me a talk idea bout constraining agentic LLMs to improve correctness
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Reposted by Malcolm 朝精 Barrett
Nicolas Hénin @nicolashenin.net · 17/09/2026
Nice campaign by the Norwegian Consumer Council about the declining lifespan of products. Enjoy!
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caroline cash @cashbrowns.bsky.social · 15/09/2026
Nancy 9/8/26
Nancy’s at school…. Her teacher asks her a math problem: if Nancy had three cupcakes, and Sluggo asked her for one, how many would she have left? Nancy’s reply is “three.”
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 14/09/2026
Once again 🕯️summoning the Logistic Regression Is Not Fucked from the Netherworld 🕯️ web.archive.org/web/20190806...
web.archive.org
Logistic regression is not fucked
Summary: Arguments against the use of logistic regression due to problems with “unobserved heterogeneity” proceed from two distinct sets of premises. The first argument points out that …
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Gabor Csardi @gaborcsardi.org · 14/09/2026
New beta of #Rstats rig: LOTS of EXCITING stuff: - new: web site: rig.r-lib.org - new: user-mode R installation: rig.r-lib.org/admin-vs-use... - new: manage R packages (CRAN + git): rig.r-lib.org/pkg-guide.html - new: manage R projects and virtual environments: rig.r-lib.org/proj-guide.h...
rig.r-lib.org
rig – the R Installation Manager – rig
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Mike McQuaid @mikemcquaid.com · 13/09/2026
Today, I’m proud to announce Homebrew 7.0.0. The most significant changes since 6.0.0 are faster installations, stronger sandboxing, native macOS app, vulnerability checks, advisory database, end of macOS 10.15 support and Intel Macs to Tier 3.
brew.sh
7.0.0
Today, I’m proud to announce Homebrew 7.0.0. The most significant changes since 6.0.0 are faster installations and upgrades, stronger sandboxing, a native macOS app, built-in vulnerability checks and an advisory database, the end of macOS 10.15 support and Intel Macs moving to Tier 3.
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Andrew Heiss @andrew.heiss.phd · 11/09/2026
I like this a lot
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Reposted by Malcolm 朝精 Barrett
Carlos Scheidegger @cscheid.net · 10/09/2026
quarto-hub is really coming together, y'all! I'm so excited to share some of this with you at conf next week. Check out our upcoming collaborative wysiwyg editor working on a fully-styled Quarto 2 page:
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Julia M. Rohrer @dingdingpeng.the100.ci · 03/09/2026
Very few people know that this is how it all began @celestialsem.bsky.social
Sewall Wright's guinea pig path diagram, but the guinea pigs are wearing space helmets and there's a space background
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Josiah @josiah.rs · 10/09/2026
I'm starting go all in on S7. Just waiting for new development version to be released 🫣 {s7x} has been an absolute cheat code for my package development lately. s7x.josiah.rs #rstats
s7x.josiah.rs
Extensions to the S7 Object System
Provides utilities that extend the S7 object system: enumerated types with a fixed set of variants, scalar-constrained properties, range-bound numeric properties, and property-level unions and interse...
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 10/09/2026
Listening to this Mingus classic on the importance of version control
Album artwork for Charles Mingus’s Mingus Ah Um, featuring an abstract geometric painting in muted red, blue, yellow, pink, and cream. Below the cover, the track “Better Git It in Your Soul” and artist Charles Mingus are displayed.
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public health guy @publichealthguy1.bsky.social · 10/09/2026
📈📈📈
Gas Station Price Sign Using Scientific Notation

the ONION
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Emily Riederer @emilyriederer.bsky.social · 10/09/2026
We could save years of education across data science and data engineering by just printing t-shirts that say "know what makes a row"
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 10/09/2026
we have this little problem where we are always selecting on the data that we *have*
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Reposted by Malcolm 朝精 Barrett
Mike X. Nichols @mikexnichols.bsky.social · 08/09/2026
Thinking about this exchange today
A YouTube video for the Water Temple in The Legend of Zelda: Ocarina of Time. The comments section has an exchange as detailed below. “@TheMrdangles16 • 11y ago: 
i hate the water temple... too confusing :(“ “@KeithHalsell • 2y ago: 
it's been 9 years, i hope you are doing great in life now.” “@TheMrdangles16 • 2y ago: it couldn't be going worse Keith.”
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 08/09/2026
What's really annoying about all this is that, RIGHT NOW, I think I have a good grasp of what tools and skills scientists should have to use these well, and I have no idea how long that will be true.
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Reposted by Malcolm 朝精 Barrett
Adam Austin @ataustin.bsky.social · 07/09/2026
It me
Ben Affleck smoking meme but instead of a cigarette it's .Last.vale
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Bob Wilson @rwilson4.bsky.social · 07/09/2026
New Paper Alert! I have posted a pre-print to the arXiv: Randomization Inference for Matched Pairs with Binary Outcomes (link in comments). If you're doing propensity score matching, optimal matching, etc, and you have binary outcomes, give it a look!
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Lisa DeBruine @debruine.bsky.social · 07/09/2026
I love the concrete examples of how to avoid anthropomorphism in this article: artificial intelligence → probabilistic automation image recognition → image labeling speech recognition → automatic transcription shows bias → reflects bias hallucination → undesirable output goal → success condition
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Vincent Arel-Bundock @vincentab.bsky.social · 04/09/2026
Big news! 🎉 𝚖𝚊𝚛𝚐𝚒𝚗𝚊𝚕𝚎𝚏𝚏𝚎𝚌𝚝𝚜 1.0.0 for #Rstats is out. It’s a big number and it feels like a big step. I wrote a blog on the challenges of interpreting statistical models, SPEED, cool new features, the future, and a 5 year package development and writing odyssey. arelbundock.com/posts/margin...
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Sanjay Srivastava @sanjaysrivastava.com · 03/09/2026
Nothing, absolutely nothing, says your nodes need to be circles
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Richard McElreath 🐈‍⬛ @rmcelreath.bsky.social · 02/09/2026
I personally think anti-monopoly action is needed against the big publishers. I mean, academic publishing markets are not efficient! We have laws about this stuff already. But somehow I doubt any country is even thinking about it?
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Posit @posit.co · 31/08/2026
Announcing cuda​.ml 0.4.0: GPU-accelerated machine learning in #RStats! Bring #NVIDIA compute into tidymodels & parsnip workflows with 2 commands. • Accelerated XGBoost & LightGBM inference via nvForest • Portable model persistence Read more: opensource.posit.co/blog/2026-08...
opensource.posit.co
cuda.ml 0.4.0: GPU-accelerated machine learning from R
cuda.ml 0.4.0 simplifies installation, expands tidymodels integration and tree-ensemble inference, and adds portable persistence for supported fitted models.
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Reposted by Malcolm 朝精 Barrett
Solomon Kurz @solomonkurz.bsky.social · 26/08/2026
With {ggcube}, I can finally make versions of Kruschke's 3D plots. It only took 8 years... Here's a couple previews:
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Stephen Wild @stephenjwild.bsky.social · 31/08/2026
Meme of Grandpa Simpson complaining. 

Text: "My SEM gives me arrows and gobbledygook and that's the way I like it!"
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Journal of Open Source Software @joss-openjournals.bsky.social · 28/08/2026
Just published in JOSS: 'fwb: An R package for the fractional weighted bootstrap' doi.org/10.21105/joss.08880
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Edgar @theotheredgar.bsky.social · 27/08/2026
📣 New #tidymodels cheatsheet alert! "Model Performance with {yardstick}" is now available in PDF and Web here: opensource.posit.co/resources/ch... #posit #rstats #ml
Screenshot of both pages of the cheatsheet
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Dr Ellie Murray, ScD @epiellie.bsky.social · 27/08/2026
Love this! We need more and better descriptive studies. For those whose descriptive psych studies are somewhat epidemiologic in nature, might I recommend this paper on how to do good descriptive work👇🏼 pubmed.ncbi.nlm.nih.gov/35774001/
pubmed.ncbi.nlm.nih.gov
A Framework for Descriptive Epidemiology - PubMed
In this paper, we propose a framework for thinking through the design and conduct of descriptive epidemiologic studies. A well-defined descriptive question aims to quantify and characterize some feature of the health of a population and must clearly state: 1) the target population, characterized by …
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Julia M. Rohrer @dingdingpeng.the100.ci · 27/08/2026
Psychological Science special issue call 📣 Ever had your research denigrated bc it's "only descriptive", "what's the mechanism though?" and "but what are the theoretical implications?" Now has come your time to shine. Send your best descriptive work! www.psychologicalscience.org/publications...
Psychological Science invites submissions that advance psychological science through careful description of psychological phenomena. Psychological research often focuses on explaining and predicting phenomena before we have a sufficiently detailed understanding of them. It can be difficult to build strong theories on incomplete empirical foundations of the phenomena themselves. Careful descriptive research helps establish shared empirical reference points developed around well-characterized phenomena. As such, descriptive research contributes to psychological science both by improving our understanding of the phenomena themselves and by providing a stronger foundation for future theory-building, explanation, and prediction.

We are interested in manuscripts that:

Deepen our understanding of psychological phenomena, including what they look like, how they vary, and how they unfold;
Draw on a variety of sources of evidence and methods, including qualitative, quantitative, and mixed-methods approaches; research conducted in naturalistic settings; intensive, longitudinal, or small-sample designs; and open or large-scale datasets; 
Provide necessary context for interpreting what is being described, including who is represented in the data, the settings and circumstances in which phenomena occur, and the broader social contexts in which they are situated; and/or
Make a substantive contribution to psychological science through the quality, depth, or significance of the description provided.
The deadline for submitting regular manuscripts is April 15, 2027. Registered Reports will also be considered. The deadline for submitting Stage 1 Registered Reports is November 15, 2026. Authors should indicate in the “Comments to Editor” box during submission that the manuscript is intended for the “Descriptive Research in Psychological Science” special issue.
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 27/08/2026
All of causal health research comes down to the fact that people hate being randomized. They will self-sort as soon as is practical
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Malcolm 朝精 Barrett @malcolmbarrett.malco.io · 27/08/2026
This is a great criticism of this particular study. I also think the issues here are common in these sorts of “natural experiments”. Even if the event itself was as good as random for confounding factors, early adopters are almost always different!
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Julia M. Rohrer @dingdingpeng.the100.ci · 26/08/2026
Some people on here really need to go touch graph.
A graph with a green noisy line that looks like grass. X-axis label "x", Y-axis label "y"
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𝙃𝘼𝘾𝙆𝙀𝙍𝙈𝘼𝙉ᴴᴹ @hackermanhm.bsky.social · 26/08/2026
Werner Herzog with a speech bubble making it look like he's saying the quoted post
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Paul Naish @paulnaish.bsky.social · 26/08/2026
Longitudinal weighted and trimmed treatment effects with flip interventions www.tandfonline.com/doi/full/10....
tandfonline.com
Longitudinal weighted and trimmed treatment effects with flip interventions
Weighting and trimming are popular methods for addressing positivity violations in causal inference. While well-studied with single-timepoint data, standard methods do not easily generalize to long...
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Julia Haaf @juliaha.bsky.social · 26/08/2026
I still feel like people should quote Box (1978) instead of the other one. As I understand it, he is basically saying that “Is the model true?” is the wrong question. Therefore, the statement "all models are wrong" is the answer to a *question* that isn't useful.
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Adam Weinstein @adamweinstein.bsky.social · 25/08/2026
Hear me out: The John F. Kennedy and Dolly Parton Memorial Center for the Performing Arts
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Kevin Schaul @kevinschaul.bsky.social · 25/08/2026
This pope tweet is 100% AI-generated, according to Pangram. I deleted the last word. Now it's 100% human. See how hard it is to flip an AI detector -> 🎁 wapo.st/4y3Y7G4
Screenshot showing 100% AI-generatedScreenshot showing 100% human-written
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beetle moses @beetlemoses.bsky.social · 25/08/2026
A New Color (1/5🧵)
Page 1: A man is walking home, smoking a cigarette, being quietly trailed by a UFO above him. As he enters his apartment, two aliens watch from inside the ship. Alien 1, who has a large head, says, “that’s him. Let’s move.” Page 2: The man walks upstairs as the aliens watch from the entrance of the building. The man enters his apartment and greets his little dog. Suddenly there is a knock at the door.Page 3: he peers through his peephole, and sees the two aliens standing in the hallway. Alien 1 is holding a briefcase. From behind him, the voice of alien one: “don’t scream.” Page 4: The aliens are seated across the room on the man’s couch. Sadie is in her bed next to them. Alien 1 says, “you’re not in any danger. Have a seat.” The man looks at his dog and thinks, “sadie is unusually calm.” Alien 1: don’t scream, or it’s a problem.
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Etienne Bacher @etiennebacher.bsky.social · 24/08/2026
#rstats I'm glad to announce Jarl 0.6.0! Jarl is a very fast R linter, written in Rust. This release brings many improvements and fixes. See the blog post: www.etiennebacher.com/posts/2026-0... And the full changelog: jarl.etiennebacher.com/changelog 🧵 to highlight some features below (1/5)
etiennebacher.com
Jarl 0.6.0 | Etienne Bacher
Personal website of Etienne Bacher: blog posts about R, research, and software.
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