Reposted by Kate BakerWill Ratcliff @wcratcliff.bsky.social · 16hApplication review for the GRC in Microbial Population Biology will start October 15th! Please apply before then if you are keen on coming. www.grc.org/microbial-po... 23126
Reposted by Kate BakerKate Baker @ksbakes.bsky.social · 25/09/2026We have an open Assistant/Associate Professor position in Pathogen Biology at the Department of Genetics - come and join us! 🦠 🧫 🧬https://www.cam.ac.uk/jobs/assistantassociate-professor-in-pathogen-genetics-pc51175cam.ac.ukAssistant/Associate Professor in Pathogen GeneticsApplications are invited for an Assistant or Associate Professorship in Pathogen Genetics to be held in the Department of Genetics. We are searching for a talented individual with a track record of fu... 03970
Reposted by Kate BakerHonour McCann @honour.bsky.social · 26/09/2026Great to see this published! A little paper backstory: was reading about interesting outbreaks during COVID-related shutdowns and happened across some cool work by Emmanuel Wicker et al., who first documented this outbreak and made a collection with fantastic metadata 1/9 1156
Kate Baker @ksbakes.bsky.social · 25/09/2026We have an open Assistant/Associate Professor position in Pathogen Biology at the Department of Genetics - come and join us! 🦠 🧫 🧬https://www.cam.ac.uk/jobs/assistantassociate-professor-in-pathogen-genetics-pc51175cam.ac.ukAssistant/Associate Professor in Pathogen GeneticsApplications are invited for an Assistant or Associate Professorship in Pathogen Genetics to be held in the Department of Genetics. We are searching for a talented individual with a track record of fu... 03970
Kate Baker @ksbakes.bsky.social · 24/09/2026Some old friends on this one which has taken a long time to come together. Congratulations to what I remember as a wonderful community of researchers on this incredible effort 🦇 🧬 033
Reposted by Kate BakerSimon Fisher @profsimonfisher.bsky.social · 23/09/2026“Bats are extraordinary among mammals, having uniquely evolved powered flight & laryngeal echolocation, along with disease resistance, extended healthspan & ability to hibernate. With genome assemblies of 103 bat species we provide new insights into evolutionary history & trait diversification.”🦇🧬🙌🧪nature.comReference genomes and fossils revise bat family phylogeny and biogeography - NatureAn updated phylogeny of bats is presented, based on new genome assemblies and many ancient fossils and including all known bat families. 14020
Kate Baker @ksbakes.bsky.social · 20/09/2026Is this the academic equivalent of ‘you must show your working’ 001
Reposted by Kate BakerNoah Whiteman @nkwhiteman.bsky.social · 18/09/2026Reminder that the deadline for the tenure track position in my division in MCB is one month away (October 19), as you’ll see it is a wide open search in terms of area within and across fields of genetics, genomics, evolution, and development. Please circulate. 02624
Reposted by Kate BakerDidier Mazel @amazeld.bsky.social · 18/09/2026Dear all, I have the pleasure to inform you that the online course "Resistance to Antibacterial Agents", produced by the Institut Pasteur, will start on November 3, 2026. How does ABR emerge and spread? ... 🔗 www.fun-mooc.fr/en/courses/r...fun-mooc.frResistance to antibacterial agentsThe origin, risks, diagnosis, epidemiology of resistance to antibacterial agents in man and livestock worldwide, as well as preventive and countermeasures, in a « one health » perspective. 12018
Reposted by Kate BakerJulian Parkhill @julianparkhill.bsky.social · 16/09/2026This will be an amazing opportunity for the right person. The Department of Veterinary Medicine in Cambridge is recruiting for an established chair who will also be our Head of Department. Your research can be in any area of veterinary science. Please circulate. www.cam.ac.uk/jobs/profess...cam.ac.ukProfessorship of Veterinary ScienceThe Board of Electors to the Professorship of Veterinary Science invite applications for this Professorship from persons whose work is connected with veterinary science (ideally in research aligned wi... 11023
Kate Baker @ksbakes.bsky.social · 09/09/2026... short answer yes, but you would have a fun and rewarding few years getting to the long answer! Exciting new group and great environment at Bath looking for a PhD student 👇 160
Reposted by Kate BakerJulian Parkhill @julianparkhill.bsky.social · 08/09/2026Chair in Bacteriology in Cambridge Department of Medicine. A great opportunity. Please circulate. www.cam.ac.uk/jobs/researc...cam.ac.ukResearch Professor in the field of BacteriologyStrengthening Cambridge's leadership in bacteriology research Bacterial infection and antimicrobial resistance remain among the most pressing global health challenges of our time. At Cambridge, the De... 02459
Kate Baker @ksbakes.bsky.social · 08/09/2026Out today: an opinion piece we’ve been thinking around for a while now to narrow the diarrhoeal disease surveillance gap between high income settings and LMIC through traveller genomics. Check it out here 👇 1/8 🧵 doi.org/10.1016/j.ti... 1146
Reposted by Kate BakerJohannes Cairns @jcairns.bsky.social · 06/09/2026Wanna become professor in medical bacteriology at Uppsala? www.uu.se/en/about-uu/...uu.seProfessor in Medical Bacteriology - Uppsala UniversityProfessor in Medical Bacteriology, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Medical Biochemistry and Microbiology, Uppsala University 01218
Reposted by Kate BakerYonatan Grad @yhgrad.bsky.social · 04/09/2026Postdoc position in infectious disease epi, genomics, applied stats to join our work on sampling strategies for pathogen genomics surveillance. Based in Shirlee Wohl’s group at BWH but to work closely with my team. See ad here: massgeneralbrigham.wd1.myworkdayjobs.com/en-US/MGBExt...massgeneralbrigham.wd1.myworkdayjobs.comPostdoctoral FellowSite: The Brigham and Women's Hospital, Inc. Mass General Brigham relies on a wide range of professionals, including doctors, nurses, business people, tech experts, researchers, and systems analysts t... 0818
Reposted by Kate BakerJohn Lees @johnlees.bacpop.org · 03/09/2026I am hiring in this round – please do apply if you are interested in: machine learning (protein/genome/gene language models), methods for pathogen data analysis, pangenomes (or share with any students who might want to work with us) 01616
Reposted by Kate BakerAdrian Liston @labliston.bsky.social · 27/08/2026Two post-doc positions available in our lab! It is a supportive environment and on which boosts careers! Historically, of our ~30 post-docs 27% have gone on to tenure-track positions, 27% did another post-doc, and 42% have gone on to positions in biotech or pharma. 13620
Reposted by Kate BakerMolecular Biology and Evolution @molbioevol.bsky.social · 20/08/2026Boccarella et al. show that bacterial persistence impacts the speed, onset, and magnitude of antibiotic resistance evolution. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio #ecoliacademic.oup.comBacterial Persistence Modulates the Speed, Magnitude, and Onset of Antibiotic Resistance EvolutionAbstract. Bacterial persistence, a phenomenon where a subpopulation of cells can exhibit increased survival to antibiotic stress, allows part of the popula 1146
Reposted by Kate BakerAndrea Schreier @andrea-schreier.bsky.social · 19/08/2026So proud of PhD student Grace Rosburg-Francot's hard work, developing eDNA methods to detect/monitor aquatic invasive species in Lake Tahoe! Would you like to join us in protecting Lake Tahoe from the golden mussel? Check out her campaign at experiment.com! experiment.com/projects/how... 1186
Reposted by Kate BakerLauren Cowley @laurencowley.bsky.social · 07/07/2026Have you registered for Genome Science yet? www.genomescience.org.uk Its going to be in mad for it Manchester September 14th-16th 2026. Lots of great microbial genomics and bioinformatics speakers so make sure you secure a place. Early bird registration ends on 31/7/26.static.klipy.comLiam Gallagher: Oasis Rooftop WalkALT: Liam Gallagher: Oasis Rooftop Walk 065
Reposted by Kate BakerJonathan Coxhead @4130chromo.bsky.social · 16/07/2026Are you going to Genome Science UK 2026 in Manchester 14th-16th September? We know life can get extra busy 😧 before the summer holidays 🏖️ so we've extended abstract submission deadline to 24th July & early bird registration deadline to 10th August 😁 Check out the agenda 🧬🧬 www.genomescience.org.ukgenomescience.org.ukGenome Science UK 2026Manchester University 023
Kate Baker @ksbakes.bsky.social · 09/07/2026👀👇 New work on sexually transmitting Shigella (press-friendly: bit.ly/4bBarEL) From continued collaboration with @clairejenkins2.bsky.social @ukhsa.bsky.social, @pducambridge.bsky.social co-lead @hsalje.bsky.social, a talented student Julia Marshall www.linkedin.com/in/julia--ma..., and others! 🧫🧬💊 11311
Reposted by Kate BakerFrançois-Xavier WEILL @fxweill.bsky.social · 03/07/2026Can bacterial genomics bring 70 years of epidemiological surveillance back to life? We're hiring a postdoc (2–3 years) to explore the historical evolution of Salmonella Typhi using a unique genomic dataset. More details: euraxess.ec.europa.eu/jobs/449895 01917
Reposted by Kate BakerInstitut Pasteur | 130 years of biomedical research @pasteur.fr · 30/06/2026Congratulations to Aude Bernheim (@audeber.bsky.social), elected EMBO Member 2026 🎉 Her work on bacterial immunity is reshaping how we understand immune systems across all life forms — from bacteria to humans. @embo.org 3648
Reposted by Kate BakerDr Charlotte Hammer @epihammer.bsky.social · 29/06/2026I am very honoured to have had my work on disease emergence and pandemic preparedness highlighted together with the work of @ksbakes.bsky.social in this @cam.ac.uk Research Profile. Thank you to everyone who is making this research possible. 042
Reposted by Kate BakerTARGetAMR @target-amr.bsky.social · 26/06/2026🧬 TARGetAMR’s Prof @ksbakes.bsky.social & @drtessjohnson.bsky.social feature in The Lancet Microbe podcast on AMR National Action Plans & microbial genomics. 🎧 The episode is available via The Lancet Microbe, Spotify, Apple Podcasts, and Amazon Music. 👉 Listen: www.targetamr.org.uk/targetamr-le... 043
Kate Baker @ksbakes.bsky.social · 11/06/2026I know a lot of people on the fence about frontiers… hopefully this is all you need to come down 0102
Reposted by Kate BakerMichael Okun @michael-okun.bsky.social · 10/06/2026I’ve officially resigned as Associate Editor for Frontiers in Systems Neuroscience. It used to be a reputable journal, but became a case study in how forced automation destroys academic integrity. 👇 5435871430
Reposted by Kate Bakersylvain Brisse @sylvainbrisse.bsky.social · 07/06/2026👉 Only 2 weeks to go for registrations to the famous ICARe course on #antimicrobials and #resistance in #Annecy, France: www.icarecourse.org Great course, great venue, great networking opportunity with @gdwantibiotics.bsky.social and other huge legends in the fieldicarecourse.orgInterdisciplinary Course on Antibiotics and Resistance 045
Reposted by Kate BakerSholto David @sholtodavid.bsky.social · 02/06/2026Today I'm posting a new blog about an astonishing scientific own goal. Hundreds of papers have reported using a totally wrong antibody to investigate the tumor suppressor p16. This mistake has happened because scientists have muddled the names of two proteins. forbetterscience.com/2026/06/02/m... 1617078
Reposted by Kate BakerGonçalo Castelo-Branco @gocastelobranco.bsky.social · 01/06/2026Come and start your group at @ki.se! ki.se/en/about-ki/...ki.seAssistant Professor recruitment programme 2026Karolinska Institutet continues to grow a global community of excellence. In summer 2026, KI is inviting applications for 21 Assistant Professor positions in medicine and health. We are once again loo... 01217
Reposted by Kate BakerEdward Ross @edwardross.bsky.social · 01/06/2026My latest science comic just dropped! A collaboration between me, @target-amr.bsky.social @ksbakes.bsky.social and Prof. Paul Flowers. Very cool bringing the story of antimicrobial resistance to life, with an interesting detour to Victorian epidemiology and the story of Cholera hunter John Snow! 062
Kate Baker @ksbakes.bsky.social · 28/05/2026Our TARGet AMR genomics-comic is out now - check it out, share it, print it, use it in your lectures, PE events, or maybe even when trying to explain what you do to dinner guests! 🤓 🧬 🧫 1129
Reposted by Kate BakerSam Menefee-Libey @sml47.bsky.social · 24/05/2026I worked as a lifeguard and swim instructor for three years in my teens. This is spot on. Non-paywalled version gcaptain.com/drowning/gcaptain.comDrowning Doesn't Look Like DrowningDrowning is not the violent, splashing, call for help that most people expect. In this article, Mario explains what drowning really looks like and how to recognize it when its happening. 8786537
Reposted by Kate BakerBenoit Marteyn @marteynlab.bsky.social · 18/05/2026Join our team at IBMC in Strasbourg as a postdoctoral fellow to develop/assess new familles of Shigella vaccine. Please RT. emploi.cnrs.fr/Offres/CDD/U...emploi.cnrs.fr Portail Emploi CNRS - Job offer - Postdoctoral researcher (M/F) – Shigella vaccine development 012
Reposted by Kate BakerWillem van Schaik @wvschaik.bsky.social · 14/05/2026Today we are launching the @target-amr.bsky.social flexible funding initiative to pump prime new research across disciplines in the broad field of AMR genomics. Introduction by @ksbakes.bsky.social at #TARGetAMR26 Flexible Funding – TargetAMR share.google/bWYYdQUo8azy... 1209
Reposted by Kate BakerTARGetAMR @target-amr.bsky.social · 14/05/2026🌟Great start to #TARGetAMR26! 🎙️Today we heard an inspiring keynote, insightful talks and fantastic discussions on AMR genomics Plus our Co-Directors @wvschaik.bsky.social @ksbakes.bsky.social unveiled: 🚀Launch of our Flexible Funding Initiative 📚Debut of the TARGetAMR comic ⌛️We can't wait for Day 2! 065
Reposted by Kate BakerTARGetAMR @target-amr.bsky.social · 14/05/2026🎉 Its day 1 of the TARGetAMR Conference 2026! 💡 We’re live from The Studio, Birmingham to explore: Building the future of AMR Genomics 🧬 🔎 A full day of innovation, collaboration, and future-focused discussions awaits ⌛️ Stay tuned for highlights from the day! #TARGetAMR26 021
Reposted by Kate BakerVinTorraca @vintorraca.bsky.social · 13/05/2026We are recruiting a postdoctoral researcher to study Shigella persistent infection using the zebrafish infection model! Deadline to apply: 03-Jun-2026 Link to post: shorturl.at/cCZjK Any questions feel free to get in touch! @kingscollegelondon.bsky.social Please repost! 297
Reposted by Kate BakerWhitney Zahnd @whitneyzahnd.bsky.social · 07/05/2026The Department of Epidemiology here at the University of Iowa is searching for a new department chair! Please consider applying or sharing with others who may be interested! jobs.uiowa.edu/faculty/view... www.public-health.uiowa.edu/epi-deo-sear...jobs.uiowa.eduFaculty Requisition Details - Jobs@UIOWA: Search and Apply for Jobs at The University of IowaJobs@UIOWA: The official place to search and apply for jobs at The University of Iowa. 01520
Reposted by Kate BakerLauren Palmer @laurenpalmer.bsky.social · 07/05/2026🚨Faculty job search: University of Illinois Chicago Micro & Immuno department is hiring! Open rank and open area within host-pathogen interactions. Apply by May 31 to join us in UI College of Medicine in the heart of Chicago! uic.csod.com/ux/ats/caree... 584101
Kate Baker @ksbakes.bsky.social · 07/05/2026Cool targeted (delivery) of antibiotics call opening from Wellcome LEAP tomorrow if of interest wellcomeleap.org/focused-anti...wellcomeleap.orgFocused Antibiotics | Wellcome Leap: Unconventional Projects. Funded at Scale.NEW $50M PROGRAM APPLY NOW We are pleased to announce the selected performers.PI Name, PI InstitutionPI Name, PI InstitutionPI Name, PI InstitutionPI Name, PI InstitutionP... 010
Reposted by Kate BakerWill Ratcliff @wcratcliff.bsky.social · 06/05/2026Really reading the literature has always given scientists in training a huge advantage. But these days, it seems like a superpower. So many people skim/AI summarize papers, but then you miss out on so much! It's like reading a description of a Van Gogh painting vs. staring at it for 2h. 38518
Reposted by Kate BakerCharles Wei @rositea.bsky.social · 06/05/2026It took years after my masters to publish BaGPipe, now it's out! It's a Nextflow pipeline to run end-to-end bacterial GWAS, heavily tested and benchmarked on different datasets, and now in good hands of the Sanger's Pathogen Informatics Team. link.springer.com/article/10.1...link.springer.comBaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies - BMC MicrobiologyBMC Microbiology - Microbial genome-wide association studies (GWAS) are crucial for linking genetic variation to phenotypic traits in bacteria. However, current tools often involve complex manual... 2208
Kate Baker @ksbakes.bsky.social · 25/04/2026Had a phenomenal week with an incredible group of 190 researchers from ~30 countries at #Shigella2026 Thank you to everyone involved, and see you in 2028! 0111
Reposted by Kate BakerThe Shigella Meeting @shigellameeting.bsky.social · 22/04/2026Looking good on Day 3 of #Shigella2026 ☀️🇫🇷🧫 0208
Reposted by Kate BakerBen Vezina @bananabenana.bsky.social · 21/04/2026This preprint on #Shigella flexneri covers a new genotyping scheme + tool, #AMR and analysis of 13k genomes from ~1925-current day 🦠 #MicroSky #microbiology 🧪 www.biorxiv.org/content/10.6...biorxiv.org 043
Kate Baker @ksbakes.bsky.social · 21/04/2026@yekwah.bsky.social launches FlexIt: the S. flexneri genotyping scheme at @shigellameeting.bsky.social 🎉 1234
Reposted by Kate BakerThe Shigella Meeting @shigellameeting.bsky.social · 20/04/2026Karen Kotloff follows Philippe’s molecular talk with a tour de force in Shigella clinical and epidemiological features 063