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Golia Shafiei

@goliashf.bsky.social
635 followers 262 following 42 posts

Director of Informatics | Senior Scientist | Ann S. Bowers Women’s Brain Health Initiative (WBHI)

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Reposted by Golia Shafiei
Steven Meisler @stevenmeisler.com · 01/10/2026
There are many MRI approaches for studying myelin. But which ones are reliable, how do they relate to each other, and how do they behave in gray vs white matter? In our new preprint, we introduce Myelin Imaging Reliability and ReprOducibility Resource (MIRROR) 🧠🪞 📄🔗 www.biorxiv.org/content/10.6...
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Christian Schnell @neuroschnell.bsky.social · 02/10/2026
New paper in @plosbiology.org Biology from Theodore D. Satterthwaite's lab about the maturation of intrinsic timescale across the human cortex during development: journals.plos.org/plosbiology/...
journals.plos.org
Intrinsic timescale develops hierarchically from sensorimotor to association cortex in youth and stabilizes in adulthood
Intrinsic timescale reflects the temporal window of neural processing, but how it matures across the human cortex during development remains unclear. This study shows that intrinsic timescale develops...
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Andrea Luppi, PhD @loopyluppi.bsky.social · 02/10/2026
1/ 🚨 Just out in @natneuro.nature.com! 🧠 We profiled >6,000 features of brain dynamics across humans, macaques, marmosets, mice, fish and worms 🧑🐒🐒🐁🐟🪱 to find a shared neural endpoint of anaesthesia: spatiotemporal isolation of local activity 🧵👇 🔗 doi.org/10.1038/s41593-026-02460-4
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Ted Satterthwaite @ted-satterthwaite.bsky.social · 30/09/2026
Check out this awesome work by @goliashf.bsky.social -- now out in PLOS Biology -- showing that development of intrinsic neural timescale aligns with the cortical hierarchy defined by the S-A axis in multiple datasets.
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Golia Shafiei @goliashf.bsky.social · 30/09/2026
So excited that our work is now published in PLOS Biology!! 🎉 Check out the final version here: doi.org/10.1371/jour... And for a bit more context and what we found, here’s our earlier thread: bsky.app/profile/goli...
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PLOS Biology @plosbiology.org · 30/09/2026
How do intrinsic timescales, which reflect the temporal window of neural processing, mature during development? This study by @goliashf.bsky.social @ted-satterthwaite.bsky.social &co identifies a hierarchical trajectory, from sensorimotor to association cortices. 🧪 #NeuroSky plos.io/46RzqRG
Developmental patterns of intrinsic timescale.
(a) Average timescale increases during development in youth  (b) Age effects quantified as partial R2 are depicted across the cortex, displaying a heterogeneous spatial distribution. (c) Age effects on intrinsic timescale were compared to the S–A axis, identifying a hierarchical pattern of developmental patterns in intrinsic timescale along the S–A axis. The results demonstrate that intrinsic timescale in association regions increases during development in youth while it remains relatively stable in sensorimotor regions.
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Sofie Valk @sofievalk.bsky.social · 20/08/2026
Brain structural variations across neurodevelopmental and psychiatric conditions are systematically constrained by the brain's intrinsic architecture > www.medrxiv.org/content/10.6...
medrxiv.org
Lifespan brain structural variation reveals shared organization across mental health conditions
Elucidating the neurobiological basis of neurodevelopmental and psychiatric conditions (NDPCs) remains challenging because brain alterations vary within diagnoses and overlap across them. Whether dive...
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PennLINC @pennlinc.bsky.social · 07/07/2026
New dataset out in Data in Brief 🧠 We're releasing an open, test-retest neuroimaging dataset built for directly comparing single-echo vs. multi-echo fMRI, head-to-head, in the same people. 1/
sciencedirect.com
A single-echo/multi-echo BOLD fMRI test-retest dataset
Functional MRI (fMRI) remains one of the primary tools for non-invasive studies of brain activity and organization in humans. Recently, multi-echo ima…
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briana-mac.bsky.social @briana-mac.bsky.social · 07/05/2026
How much does the childhood environment shape the brain? In our new preprint, we study the exposome (300+ environmental exposures) and link it to white matter structure in 8,000+ kids. 🧠✨ 🔗 Read the preprint: bit.ly/4wfsybZ 🧵 Thread below
bit.ly
White matter reflects the childhood exposome
The childhood environment is critical for brain development. However, most neuroimaging studies examine individual environmental measures (e.g., socioeconomic status) or a limited set of exposures, obscuring how the combination of complex, real-world exposures jointly influence brain development. Here we investigated how white matter shape and tissue properties are linked to the childhood exposome, a multidimensional measure capturing over 300 environmental exposures. Using multi-shell diffusion MRI from 8,183 children (ages 9-10) in the ABCD study, we quantified microstructural and macrostructural properties across 62 person-specific white matter tracts. The exposome showed widespread and highly replicable associations with both white matter microstructure and macrostructure: more advantaged environments were associated with larger tract macrostructure and lower orientation dispersion. Principal component analysis revealed that the dominant axis of exposome-white matter covariation aligns with the cortical sensorimotor-association hierarchy, such that tracts spanning this hierarchy exhibit the strongest associations with the exposome. Multivariate models demonstrated that patterns of white matter features explained 25% of the variance in the exposome in unseen individuals. Notably, white matter-based prediction of cognition was markedly reduced after accounting for the exposome (~82% reduction in explained variance), indicating that brain-cognition associations overlap substantially with variance captured by the exposome. These findings generalized to independent data from the Healthy Brain Network (n=869), which differs substantially from ABCD in MRI acquisition, participant selection, and childhood environments. Together, these results suggest that white matter architecture strongly reflects the childhood environment. ### Competing Interest Statement A.A.B. has consulted for Octave Bioscience and holds equity in Centile Bioscience. RB is on the Advisory Board and holds equity in Taliaz Health. D.A.F. is a founder of Turing Medical. Any potential conflict of interest has been reviewed and managed by the University of Minnesota. D.A.F. is an inventor of the FIRMM Technology 2198 (FIRMM, real-time monitoring and prediction of motion in MRI scans, exclusively licensed to Turing Medical). Any potential conflict of interest has been reviewed and managed by the University of Minnesota. This research was supported by funding from the National Institutes of Health (T32MH019112 to S.L.M.; R37MH125829 to D.A.F. and T.D.S.; 2R01MH112847 to R.T.S. and T.D.S.; R01MH120482 to T.D.S.; 2R01MH113550 to T.D.S.; R01MH123550 to R.T.S; F30MH138048 to K.Y.S.; RF1MH121868, RF1MH121867, RF1MH126699, R01AG060942, U19AG066567, R01EY033628, and R01EB027585 to A.R.; R01MH134886 to R.B.; T32MH016804 and T32MH018951 to V.J.S; R01MH133843 to A.A.B.; F31MH136685 to J.B.). S.L.M. was supported by the Hartwell Foundation (S.L.M.); G.S. was supported by a postdoctoral fellowship from the Canadian Institutes of Health Research (CIHR). A.S.K. is supported by a NARSAD Young Investigator Award from the Brain and Behavior Research Foundation. M.D.H. was supported by the German Research Foundation (project number 572317568). LMS was supported by a NSF SBE Postdoctoral Research Fellowship (#2507497).
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Leon Lotter @leondlotter.de · 07/05/2026
My most recent and biggest work so far is finally out as a preprint! 🧠🧵 *Linking human brain functional connectivity to underlying neurotransmission* doi.org/10.64898/202... 1/n TL;DR below ↓ #neuroskyence #neuroimaging #MedSky #PsySciSky
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Steven Meisler @stevenmeisler.com · 19/04/2026
Diffusion MRI (dMRI) is a powerful tool to study white matter maturation. In our new preprint, we process and distribute a new resource of >24,000 ABCD dMRI scans using open source tools! We then evaluate how methods shape inferences about development. 🔗 www.biorxiv.org/content/10.6...
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Ted Satterthwaite @ted-satterthwaite.bsky.social · 15/04/2026
Just beyond delighted to see this new work from all-star @goliashf.bsky.social out !!!!! Checkout her thread below ⬇️
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Noemí Rubau @noemirubau.bsky.social · 14/04/2026
Imagine we could characterize neurobiological vulnerability to perinatal mood disorders (PMADs)…even before conception🤯? At the TReNDS Lab, we’re building a multimodal dataset following individuals at elevated risk for PMADs from preconception through postpartum.🧠🤰Check out our preprint! 🧵👇
doi.org
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
✨ Massive thanks to all the co-authors and collaborators — especially my fabulous reproducibility buddy @joelleba.bsky.social and my amazing supervisor @ted-satterthwaite.bsky.social !! ✨
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
7️⃣ We also provide all code used to conduct the reported analyses, accompanied with a reproducibility guideline. 💻 pennlinc.github.io/shafiei_time...
pennlinc.github.io
Reproducibility Guide
Code and documentation supporting Shafiei et al., 2026, “Mapping developmental patterns of intrinsic timescale”
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
6️⃣ Together, these findings reveal convergence between major axes of cortical organization and development, highlighting intrinsic timescale as a principled marker of hierarchical brain maturation in youth.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
5️⃣ Our analysis of an independent healthy young adult dataset (age range 22–37 years) underscores the specificity of the developmental findings, suggesting that the intrinsic timescale develops along the S–A axis in youth and stabilizes in adulthood.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
4️⃣ We replicated the findings in an independent developmental sample, assessing the generalizability of the observed developmental patterns.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
3️⃣ We found that developmental changes in the intrinsic timescale follow a hierarchical pattern that recapitulates the sensorimotor–association (S–A) axis. Specifically, fMRI-based intrinsic timescale remains relatively stable in sensorimotor regions but increases in association cortex in youth.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
2️⃣ Using two independent developmental datasets (age range 8–22 years), we investigated the developmental patterns of intrinsic timescale estimated from functional MRI data.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
1️⃣ Intrinsic timescale is a commonly used measure of neural dynamics that displays a hierarchical cortical organization, with shorter timescales in sensorimotor cortex compared to association cortex. However, less is known about how intrinsic timescale evolves during human brain development.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
✨Excited to share that our new preprint, "Mapping developmental patterns of intrinsic timescale", is now available on bioRxiv!! 📚 doi.org/10.64898/202...
doi.org
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
✨Massive thanks to all the co-authors and collaborators — especially my fabulous reproducibility buddy @joelleba.bsky.social and and my amazing supervisor @ted-satterthwaite.bsky.social !!✨
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
7️⃣ We also provide all code used to conduct the reported analyses, accompanied with a reproducibility guideline. 💻 pennlinc.github.io/shafiei_time...
pennlinc.github.io
Reproducibility Guide
Code and documentation supporting Shafiei et al., 2026, “Mapping developmental patterns of intrinsic timescale”
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
6️⃣ Together, these findings reveal convergence between major axes of cortical organization and development, highlighting intrinsic timescale as a principled marker of hierarchical brain maturation in youth.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
5️⃣ Our analysis of an independent healthy young adult dataset (age range 22–37 years) underscores the specificity of the developmental findings, suggesting that the intrinsic timescale develops along the S–A axis in youth and stabilizes in adulthood.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
4️⃣ We replicated the findings in an independent developmental sample assessing the generalizability of the observed developmental patterns.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
3️⃣ We found that developmental changes in the intrinsic timescale follow a hierarchical pattern that recapitulates the sensorimoto–association (S–A) axis. Specifically, fMRI-based intrinsic timescale remains relatively stable in sensorimotor regions but increases in association cortex in youth.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
2️⃣ Using two independent developmental datasets (age range 8–22 years), we investigated the developmental patterns of intrinsic timescale estimated from functional MRI data.
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Golia Shafiei @goliashf.bsky.social · 14/04/2026
1️⃣ Intrinsic timescale is a commonly used measure of neural dynamics that displays a hierarchical cortical organization, with shorter timescales in sensorimotor cortex compared to association cortex. However, less is known about how intrinsic timescale evolves during human brain development.
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Brooke Sevchik @bsevchik.bsky.social · 08/04/2026
🍄 Our new living systematic review and meta-analysis on MDMA for PTSD is now live on medRxiv. Here's what we found and how we built upon our open science infrastructure to support it 🧵 www.medrxiv.org/content/10.6...
medrxiv.org
A living systematic review, meta-analysis, and open data resource of trials of MDMA-assisted therapy for PTSD
3,4-methylenedioxymethamphetamine (MDMA) has emerged as a potential treatment for post-traumatic stress disorder (PTSD), generating considerable enthusiasm in the field. However, rapidly changing evid...
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Parker Singleton @parkersingleton.bsky.social · 06/04/2026
🍄 Our new living systematic review and meta-analysis on psilocybin for depression is out now in Nature Mental Health. Here's what we found and the open science infrastructure we built to support it 🧵 Open-Access Link: rdcu.be/fbU5V
rdcu.be
A living systematic review, meta-analysis and open-data resource of randomized controlled trials of psilocybin treatment for symptoms of depression
Nature Mental Health - This study presents a living systematic review and open-data meta-analytic database from 15 randomized controlled trials examining the effects of psilocybin treatment on...
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MindCORE at the University of Pennsylvania @pennmindcore.bsky.social · 19/03/2026
Excited to to learn more about this open resource for studies fo the developing brain today in this talk from @goliashf.bsky.social at Noon. Join us. Bring your laptop. There will be pizza. 200 Goddard @sas.upenn.edu @pennmedicine.bsky.social @upenn.edu
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MindCORE at the University of Pennsylvania @pennmindcore.bsky.social · 13/03/2026
Reproducible Brain Charts (RBC): Demo & Data Exploration Learn About RBC, an open resource for studies of the developing brain & mental health Thursday, March 19, 12–1 PM 200 Goddard Pizza will be served! Golia Shafiei, PhD CIHR Postdoctoral Fellow, PennLINC mindcore.sas.upenn.edu/calendar_eve...
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Audrey Luo @audreycluo.bsky.social · 02/03/2026
We think of white matter as the highways of the brain. But when we followed development along those highways, we were surprised. The journey is more complex than we thought. My final PhD paper, “Two Axes of White Matter Development”, is now out in @natcomms.nature.com! 🛣️🧠✨ 🔗 bit.ly/wm2axes
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Bratislav Misic @misicbata.bsky.social · 13/02/2026
Inter-individual variability of neurotransmitter receptor and transporter density in the human brain | doi.org/10.1007/s004... How do neuroreceptor distributions vary across people?
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Annie G. Bryant @anniegbryant.bsky.social · 27/01/2026
The extended version of my thesis procrastination project/subcortex visualization package is out now in both Python and R, now that I’ve graduated 🤠 This figure shows the 9 atlases included (and counting)! Preprint: www.biorxiv.org/content/10.6... Website: anniegbryant.github.io/subcortex_vi...
Nine subcortical/cerebellar atlases included in the subcortex_visualization Python package (and subcortexVisualizationR package in R). The atlases are depicted in two-dimensional vector graphic format.
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Lucinda Sisk @lucindasisk.bsky.social · 14/01/2026
Excited to share a new preprint that examines how adversity exposure across development is associated with subcortical-cortical structure-function coupling and youth mental health! 🧠 Thread below: 🧵⬇
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Joëlle Bagautdinova @joelleba.bsky.social · 05/01/2026
Ever wondered how white matter tracts actually map onto the cortical hierarchy and cognition—beyond the usual “projection vs association” labels? Our new preprint tackles exactly that! 🧠✨ doi.org/10.64898/202... Thread below 🧵
doi.org
Anatomical White Matter Tracts Span the Cortical Hierarchy to Support Cognitive Diversity
Long-range white matter (WM) tracts support cognition by enabling communication between distant cortical regions, which are organized along a hierarchy defined by the sensorimotor-to-association (S-A)...
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Andrea Luppi, PhD @loopyluppi.bsky.social · 08/12/2025
🧠 Excited to share our latest preprint: Automated Brain Mapping with AI Experts!🤖 www.biorxiv.org/content/10.6... Ever wanted to summarise the cognitive/systems neuroscience literature beyond MRI and PET? Ever wished we could do the same for macaque 🐒 and mouse 🐭 ? Read on! 🧵👇
biorxiv.org
Cognitive cartography of mammalian brains using meta-analysis of AI experts
The complexity of the brain is increasingly mirrored by the complexity of the neuroscientific literature, yet no individual mind can fully grasp the diversity of scales, methodologies and model organi...
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Alex Fornito @alexfornito.bsky.social · 11/12/2025
Come and join our team! We are looking for a Research Officer to help with recruitment and assessment on a large-scale human brain imaging study: careers.pageuppeople.com/513/cw/en/jo...
careers.pageuppeople.com
Job Search
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Alain Dagher @alaindagher.bsky.social · 11/12/2025
Cortical expansion and genetic risk for PD. Led by Houman Azizi and Nooshin Abbasi. With @ptenigma.bsky.social @misicbata.bsky.social @yasharneuro.bsky.social @ndrewvo.bsky.social and many others www.medrxiv.org/content/10.6...
medrxiv.org
Brain size links neurodevelopment to neurodegeneration in Parkinson's disease
Genetic studies have advanced our understanding of Parkinson's disease (PD) pathogenesis, establishing a role for autophagy and lysosomal dysfunction. However, how genetic risk translates into neurona...
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Bratislav Misic @misicbata.bsky.social · 18/12/2025
netneurotools: a trainee-oriented approach to network neuroscience | doi.org/10.1101/2025... Our lab’s internal toolkit for accomplishing everyday tasks in brain imaging ⤵️
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Mallar Chakravarty @mallarchak.bsky.social · 22/12/2025
Excited for this new paper in @braincomms.bsky.social by Denise Wezel and @oknox.bsky.social The association between white matter hyper intensity volume and menopausal status in the UK Biobank @linasifi.bsky.social @nikigervais.bsky.social @dadarmahsa.bsky.social academic.oup.com/braincomms/a...
academic.oup.com
Investigating links between white matter hyperintensities and menopausal status using robust age-correction methods in UK Biobank
Wezel, Parent et al. investigated white matter hyperintensity volumes across the menopausal transition in the UK Biobank using strict age-matching procedur
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Ted Satterthwaite @ted-satterthwaite.bsky.social · 24/11/2025
#PenNLINC is recruiting a clinical coordinator / lab manager!!! Looking for someone who is good with both people + code, wants to learn to acquire + analyze imaging data. Alumni in this role have written 1st author papers + gone to top grad programs. Website: www.pennlinc.io Job: bit.ly/4ojvCir
pennlinc.io
neuroimaging | Satterthwaite Lab | UPenn
www.satterthwaitelab.com Homepage for Satterthwaite lab neuroimaging | neurodevelopment | adolescence | psychiatry | machine learning | network science
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Arielle Keller @ariellekeller.bsky.social · 14/11/2025
Happy New Preprint Friday!* Thrilled to share new results in collab with Sarah Lichenstein & @yiplab.bsky.social showing our brain's functional connections reflect the environments we grow up in! tinyurl.com/exposomeConnectivity #neuroskyence #PsychSciSky #DevPsy #cognition *can this be a thing??
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Ted Satterthwaite @ted-satterthwaite.bsky.social · 13/11/2025
Superb work by the stellar @bsevchik.bsky.social — a new fully processed open data resource focused on exec fxn in psychosis and ADHD. ‼️Also‼️ Brooke is applying to PhD programs now— great time to recruit an absolute star ⭐️ + wonderful human.
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bioRxiv Neuroscience @biorxiv-neursci.bsky.social · 12/11/2025
An Open, Fully-processed, Longitudinal Data Resource to Study Brain Development and Transdiagnostic Executive Function www.biorxiv.org/content/10.1101/202…
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Golia Shafiei @goliashf.bsky.social · 13/11/2025
Check out this amazing work by @bsevchik.bsky.social !!
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Valerie Jill Sydnor @valeriejsydnor.bsky.social · 11/11/2025
Happy to share our review "Investigating hierarchical critical periods in human neurodevelopment” in @npp-journal.bsky.social! We examine neurobiological, environmental & behavioral evidence for human critical periods in sensory and association cortex +discuss new research directions rdcu.be/eMkVU 🧵
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