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Ebrahim Lab

@ebrahim-lab.bsky.social
127 followers 125 following 11 posts

Lab focused on molecular force-generators and -sensors in living tissues, and all things microscopy @UVA School of Medicine. med.virginia.edu/ebrahim-lab

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Reposted by Ebrahim Lab
Florian Jug @florianjug.bsky.social · 28/12/2025
🚨 Alarm!!! 🚨 AI/ML course for microscopy image analysis!!! 🧐 In 2026 at Janelia (@hhmijanelia.bsky.social), no tuition, housing and meals provided! Isn’t that borderline unbelievable?!? 20 students, ~14 TAs and lecturers 🗓️ June 4-18 2026 ✍️ Jan 15 2026 ✍️ 🔁 pls!! www.janelia.org/you-janelia/...
janelia.org
Deep Learning for Microscopy Image Analysis
Topics The following will be covered extensively during lectures, exercises, and project work: Image denoising and restoration (fully supervised and self-supervised) Image translation (e.g.,
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JCI insight @insight.jci.org · 29/11/2025
From earlier this week: This issue’s Cover: @ebrahim-lab.bsky.social @dominikrobak.bsky.social & team report on the septin cytoskeleton at apical junctions of intestinal epithelial cells, whereby it maintains barrier integrity & protects from inflammation: insight.jci.org/articles/vie...
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Ebrahim Lab @ebrahim-lab.bsky.social · 24/11/2025
Very excited to share the latest work from our lab in @insight.jci.org, highlighting a role for the #septin #cytoskeleton in protecting against "leaky gut", by recruiting non-muscle myosin II and stabilizing the tight junction. Credit to @dominikrobak.bsky.social for the stunning cover image!
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Ahmad Jomaa @jomaalab.bsky.social · 01/08/2025
Check out our new preprint on the discovery of a molecular switch in NAC that mediates nascent chain sorting on the ribosome and prevents mitochondrial protein mistargeting by SRP. A great collaboration with the Shan Lab @Caltech and the Qi Lab @UVA: www.biorxiv.org/content/10.1...
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Ebrahim Lab @ebrahim-lab.bsky.social · 26/07/2025
Having seen your bingo card, we had to make it happen 😉! Thank you for highlighting our work @hankgreen.bsky.social ! 🙏🏽
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Ebrahim Lab @ebrahim-lab.bsky.social · 17/05/2025
Early for #MicroscopyMonday: #Hemifusomes- Newly discovered ESCRT-independent intermediates of intraluminal vesicle and multivesicular body formation! In collaboration with the Kachar Lab at the NIH and out today in @natcomms.nature.com : rdcu.be/emtQu #cryoET #trafficking #organelle #hemifusion
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Ebrahim Lab @ebrahim-lab.bsky.social · 02/05/2025
"Stereocilia"- actin-based skyscrapers that adorn sensory cells of our inner ear and covert vibrations into electrical signals—the first step in hearing and balance. #FluorescenceFriday
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Reposted by Ebrahim Lab
Shashank Shekhar lab @sshekhr.bsky.social · 26/04/2025
🎉🎉We’re on the cover of Nature Physics! @natphys.nature.com Here is the original paper www.nature.com/articles/s41...
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Ebrahim Lab @ebrahim-lab.bsky.social · 25/04/2025
From stem cell to structure- This human colonoid shows the self-organization of intestinal epithelial cells in 3D—nuclei in magenta, actin in green. A living miniature gut for your #FluorescenceFriday.
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Thibaut Brunet @thibautbrunet.bsky.social · 22/04/2025
A dream come true: the first expansion microscopy images of C. flexa 🤩 Generated by Mylan & Uzuki who learned from the best (@hiralshah.bsky.social @gautamdey.bsky.social @dudinlab.bsky.social). We will learn so much from these!
Expansion microscopy micrograph of the choanoflagellate Choanoeca flexa, vaguely evocative of a cactus. Red = tubulin, green = actin, blue = DNASame with yellow = lipids (BODIPY)
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Mark Peifer (He, him) @peiferlabunc.bsky.social · 21/04/2025
Only 29 slots left out of 200--register now!
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Ebrahim Lab @ebrahim-lab.bsky.social · 18/04/2025
🧫 A gentle reminder that your gut is an actual work of art. #FluorescenceFriday #BeneathTheScope
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Elias Spiliotis @septinlab.bsky.social · 16/04/2025
Two months left for FASEB Conference - Septins: Spatial regulators of cell biology Register now: events.faseb.org/event/septin... Come find out what these filaments do at the interface of the actin and microtubule cytoskeletons and cell membranes. You'll be hooked for life.
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@PoratShliomLab @poratshliomlab.bsky.social · 14/04/2025
Is liver zonation conserved from mice to humans? And how does fibrosis affect zonation in patients? Now, these questions are answered using scDVP. Some collaborations are meant to be! @carolineweiss.bsky.social@frosenberger.bsky.social @mannlab.bsky.social@mlsb-borgwardt.bsky.social
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Dominik Robak @dominikrobak.bsky.social · 15/04/2025
#MicroscopyMonday | Colon-scoping turned coral reef Was imaging the colon when I accidentally stumbled into this glowing patch of vascularized white adipose tissue. 🔵 mT/mG mouse (mT-only) → red membranes shown in cyan Accidental imaging hits different. #IntravitalImaging #LiveImaging
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Sergio Cruz-León @sergiocruzleon.bsky.social · 11/04/2025
Excited to share our preprint on the molecular architecture of heterochromatin in human cells 🧬🔬w/ @jpkreysing.bsky.social, @johannesbetz.bsky.social, @marinalusic.bsky.social, Turoňová lab, @hummerlab.bsky.social @becklab.bsky.social @mpibp.bsky.social 🔗 Preprint here tinyurl.com/3a74uanv
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Dominik Robak @dominikrobak.bsky.social · 11/04/2025
#3DThursday | Intestinal villi in all their folded glory These self-renewing, nutrient-absorbing structures are beautiful and functional. 🔴 Phalloidin 🔵 DAPI 🟢 Clvd cas-3 (extrusion in action!) Fixed tissue 3D imaging = big insight, tiny resolution. #Microscopy #3DImaging #biophysics #intestine
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Ebrahim Lab @ebrahim-lab.bsky.social · 08/04/2025
Have cutting-edge cell biology research to share? Submit to Molecular Biology of the Cell (MBoC)- dedicated to advancing discovery and fostering collaboration. Proud to be part of the editorial team supporting groundbreaking science. molbiolcell.org #CellBiology #MBoC #Research
molbiolcell.org
Molecular Biology of the Cell (MBoC)
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