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Florian Jug

@florianjug.bsky.social
2.8K followers 981 following 213 posts

Computer scientist on a life-science mission. Working on pushing bioimage analysis, computer vision, AI/ML methods for the life sciences. Love running and pottery.

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Reposted by Florian Jug
Jeremy Reiter @reitergroup.bsky.social · 18/09/2026
What in the world am I looking at here? @Nikon? www.nikonsmallworld.com/galleries/20...
nikonsmallworld.com
Abnormal beating of airway cilia from a child with Primary Ciliary Dyskinesia (PCD) | 2026 Small World in Motion Competition
Ning Xu - Abnormal beating of airway cilia from a child with Primary Ciliary Dyskinesia (PCD), a genetic disorder affecting respiratory function.
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Florian Jug @florianjug.bsky.social · 09/09/2026
Here we are, #BIC 2026 at @eccv.bsky.social is kicking off! Is this really the 11th time we’re doing this! 🥜 See full program here: bioimagecomputing.com
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fspasqualini.bsky.social @fspasqualini.bsky.social · 31/08/2026
Most of all, thank you to every co-author and collaborator: @Moises Di Sante and the rest of the team @unipv.bsky.social (including our new rector, Alessandro Reali!), @berterolab.bsky.social 's team Università degli Studi di Torino e @florianjug.bsky.social's team Human Technopole
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Human Technopole @humantechnopole.bsky.social · 01/09/2026
💬 “Knowing one’s limitations is not a weakness; it is what makes a tool usable.” 🤖 Our @florianjug.bsky.social on uncertainty-aware #AI, explainability and the future of biomedical research. Read the interview 👉 en.ilsole24ore.com/art/to-carry...
en.ilsole24ore.com
‘To carry out research, you need artificial intelligence that can say “I don’t know”’
For the head of Human Technopole’s new strategic AI division in medicine, making a confident mistake is worse than not answering at all. The aim is to develop models capable of measuring uncertainty
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fspasqualini.bsky.social @fspasqualini.bsky.social · 02/08/2026
And it's finally out!!! www.nature.com/articles/s41... go.nature.com/4fuaJzW Congrats to first author @moisesdisante and the research teams in my Synthetic Physiology Lab @unipv.bsky.social @berterolab.bsky.social and @florianjug.bsky.social .
nature.com
CALIPERS: Cell cycle-aware live imaging for phenotyping experiments and regeneration studies - Nature Communications
Di Sante and colleagues present CALIPERS, a framework that makes cell-cycle state a measurable variable in live-cell imaging, pairing a redesigned reporter with automated inference across human cells,...
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Anna Foix @afoix.bsky.social · 09/07/2026
🚨🚨🚨 DEADLINE EXTENSION ALERT! 🚨🚨🚨 Great news 🧬💻 The submission deadline for the BioImage Computing (BIC) Workshop at @eccv.bsky.social is now July 20, 2026! We can't wait to see your latest research! 🔬👩‍💻👨‍💻 🚪 Submit: openreview.net/group?id=the... 🌐 Info: www.bioimagecomputing.com
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Reposted by Florian Jug
Anna Foix @afoix.bsky.social · 15/06/2026
BIC @eccv.bsky.social 2026 is OPEN! Show us your new CV, AI & Bio work🦠🔬 🚪: openreview.net/group?id=the... Thanks organisers for making it possible @alex-krull.bsky.social Peter Bajcsy @janfunkey.bsky.social @florianjug.bsky.social Qingjie Meng @virginieuhlmann.bsky.social @maweigert.bsky.social ✨
openreview.net
ECCV 2026 Workshop BIC
Welcome to the OpenReview homepage for ECCV 2026 Workshop BIC
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Florian Jug @florianjug.bsky.social · 11/06/2026
Hey @ritastrack.bsky.social! We’re in Finland at a great meeting and for reasons started talking Rita. Long story short: we’re missing you! Thanks for doing a great job for so many years for our community!!!
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Estibaliz Gómez de Mariscal, PhD @gomez-mariscal.bsky.social · 10/06/2026
Second and very special day at @sigridneuhauser.bsky.social #AI symposium sharing the stage with very close references @florianjug.bsky.social @henriqueslab.bsky.social @ilastik-team.bsky.social 🤩❤️
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Jan Funke @janfunkey.bsky.social · 05/06/2026
And so it begins! Day 1, Lecture 0 of the first DL for Microscopy Image Analysis course at @hhmijanelia.bsky.social. Slides from @florianjug.bsky.social, presented by our TA Federico Carrara. #dljanelia
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Florian Jug @florianjug.bsky.social · 30/05/2026
Wow, look at this beautiful mind! 🤩 @gaiapigino.bsky.social www.repubblica.it/tecnologia/2...
repubblica.it
Gaia Pigino, l’ex schermitrice che svela i segreti delle ciglia delle cellule
Agonista e poi maestra di scherma, la scienziata dalle origini senesi guida il centro di biologia cellulare molecolare allo Human Technopole di Milano. La sua …
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Florian Jug @florianjug.bsky.social · 22/05/2026
What a time to be allowed to live in. What a responsibility to figure out how society actually will be benefitting from it. 🤯 🤩
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Florian Jug @florianjug.bsky.social · 22/05/2026
Not to mention the ethical questions and a new agreement we’ll need among ourselves about what good scientific practice can look like in a world where discoveries are facilitated by agentic systems. Systems we still have to learn how to build, deploy, trust… AND mistrust. 🚨
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Florian Jug @florianjug.bsky.social · 22/05/2026
The next years will be tremendous fun for us. But honestly… for science as a whole 🧑‍🔬 The changes ahead won’t just scratch the surface of how we conduct biomedical research, they’ll reach much, much deeper than that 🧐
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Florian Jug @florianjug.bsky.social · 22/05/2026
Am I famous now?!? 😉 Jokes aside… I am stoked to start this new research direction with some of the most amazing scientists I know! What a team we already are… and… it will only get better from here!!! ❤️
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Florian Jug @florianjug.bsky.social · 20/05/2026
More on our news page: maias.bio/news/vecc-consortium-font…
maias.bio
At the Virtual Evolving Cancer Cell Consortium
First in-person meeting of the VECC consortium at Fontanafredda — around thirty PIs from across Europe and beyond, mapping out shared work on cancer cellular processes with AI.
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Florian Jug @florianjug.bsky.social · 20/05/2026
The aim: how AI + the right data + computational tools can help us understand cancer-relevant cellular processes — and how a consortium of labs in parallel moves faster than any of us alone.
A researcher at the whiteboard during a working session at the VECC consortium meeting
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Florian Jug @florianjug.bsky.social · 20/05/2026
~30 PIs from across Europe and beyond — single-cell, spatial omics, cancer evolution, AI methods. Initiated by my HT colleague Andrea Sottoriva.
Working session at the VECC consortium meeting — U-shaped table with attendees on laptops
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Florian Jug @florianjug.bsky.social · 20/05/2026
We're at the first in-person meeting of the Virtual Evolving Cancer Cell Consortium (VECC) at Fontanafredda, in the Langhe.
VECC Consortium Meeting · 19–21 May 2026 · Fontanafredda, Langhe Region — official meeting banner over a vineyard landscape
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Florian Jug @florianjug.bsky.social · 19/05/2026
Isn’t it beautiful?! 😍 👍
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Florian Jug @florianjug.bsky.social · 18/05/2026
More in general: scientificai.maias.bio/jobs/
scientificai.maias.bio
Jobs – Scientific AI Flagship
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Florian Jug @florianjug.bsky.social · 18/05/2026
📰 News item on #MicroSplit: 🔬https://humantechnopole.it/en/news/when-less-is-more-optimising-fluorescence-microscopy-with-micro𝕊plit/ Thanks a lot @humantechnopole.bsky.social, it was such a fun co-writing experience! 🙏
humantechnopole.it
When less is more: optimising fluorescence microscopy with Micro𝕊plit - Human Technopole
Researchers at Human Technopole have developed a novel machine learning-based method that transforms composite fluorescence microscopy images with overlapping signals into separate images revealing in...
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Florian Jug @florianjug.bsky.social · 18/05/2026
🚨 Job Alert 🚨 In the Scientific AI Flagship @humantechnopole.bsky.social, with Philipp @3p1l.bsky.social Erdmann we are looking for: shorturl.at/Biavu "...experience in ML and CV... reliable software systems that interact with [the] real-world..." Look at the position and apply! Repost please! 🙏
careers.humantechnopole.it
Postdoc Erdmann Lab - Flagship Research Program Scientific AI
Postdoc Erdmann Lab - Flagship Research Program Scientific AI
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Human Technopole @humantechnopole.bsky.social · 18/05/2026
🔬 What if one fluorescence image could reveal several cellular structures at once? 🤖 Our @florianjug.bsky.social Group developed Micro𝕊plit, an #AI tool published in @natmethods.nature.com that helps split overlapping microscopy signals. Read more 👉 humantechnopole.it/en/news/when...
humantechnopole.it
When less is more: optimising fluorescence microscopy with Micro𝕊plit - Human Technopole
Researchers at Human Technopole have developed a novel machine learning-based method that transforms composite fluorescence microscopy images with overlapping signals into separate images revealing in...
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Reposted by Florian Jug
DZ Gong @dzgong.bsky.social · 16/05/2026
🎉🎉🎉
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Florian Jug @florianjug.bsky.social · 11/05/2026
You can now link to any ISM directly if you want to. Thanks Claude! isms.maias.bio#ism-13
isms.maias.bio
Our ISMs — Multimodal AI Across Scales at Human Technopole
The philosophies we work and live by — twenty principles for how we do AI for biology across scales.
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Florian Jug @florianjug.bsky.social · 11/05/2026
After reading this I thought: wouldn’t it be nice if one could link directly to an ISM? And Claude delivered this feature right away! 😉 isms.maias.bio#ism-6
isms.maias.bio
Multimodal AI Across Scales — Our ISMs
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Florian Jug @florianjug.bsky.social · 11/05/2026
Thanks, Alister! Hope to run into you soon again! 👍
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Florian Jug @florianjug.bsky.social · 10/05/2026
I will be happy for anything you choose to pick for your version! 😊 👍
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Florian Jug @florianjug.bsky.social · 10/05/2026
I’ve recently visited Detroit and read the really great Rocket ISMs booklet 🚀. It motivated me to work on ISMs that capture the spirit of the Multimodal AI Across Scales research direction we’re setting up @humantechnopole.bsky.social . What do you think about them? isms.maias.bio Honesty welcome!🙏
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Florian Jug @florianjug.bsky.social · 10/05/2026
I’m in the 10th year of leading a lab. 🧪 It is such a fun & rewarding job! ❤️ And, it is hard and brutal too! The responsibility, the people, the pressure and occasional disappointment. But at the end of the day, the joy & results outweighs it all! Why do I write this down here you’re asking? 1/2
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Beth Cimini 🔬💻📊 @bethcimini.bsky.social · 07/05/2026
The Cimini lab is hiring for both postdocs and interns! The postdoc role will cover bioimage analysis projects and educational material creation; the intern will be working on our Bilayers project for helping distribute and access deep learning tools for bioimage analysis. Click below to learn more!
forum.image.sc
Postdoctoral Associate and Data Science Intern roles - Broad Institute, Cambridge MA USA
The Broad Institute Imaging Platform (the team behind CellProfiler, Piximi, and Bilayers) is currently hiring for postdoctoral and intern roles! Postdoc role: we are looking for 1-2 candidates who ha...
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Florian Jug @florianjug.bsky.social · 06/05/2026
To challenge the typesetting pipelines of the world... 😜 Aha... and because we are splitting images... hence a split "S"!
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Florian Jug @florianjug.bsky.social · 05/05/2026
Now, let's see what YOU 🫵 people come up with. How will 🫵 make use of the method we describe? How can Micro𝕊plit enable 🫵 to figure out some biology that is otherwise not easy to capture? I am really looking forward seeing it! So, in advance, thank 🫵 too! 🙏
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Florian Jug @florianjug.bsky.social · 05/05/2026
BIG thanks to all other authors too. Everyone had their part to play and played it flawlessly. We set up the "gradient model" @humantechnopole.bsky.social. It makes us as a fantastic TEAM. www.nature.com/articles/s41... Thanks Joran, Federico, Igor, Vera, Milly, Damian! Thanks to you all! 🙏
nature.com
Using AI in bioimage analysis to elevate the rate of scientific discovery as a community - Nature Methods
The future of bioimage analysis is increasingly defined by the development and use of tools that rely on deep learning and artificial intelligence (AI). For this trend to continue in a way most useful...
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Florian Jug @florianjug.bsky.social · 05/05/2026
I must say thanks to @fspasqualini.bsky.social. He was in this with us from day 0. In some way it was a thought of his that lead to it all. We met at a lake near Milan and, as so often, one chat and a thought becomes a common goal. Thanks Francesco! 🙏
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Florian Jug @florianjug.bsky.social · 05/05/2026
I must start by saying thanks to Ashesh @ashesh-0.bsky.social. No surname, but when publishing he makes it easy for us all and goes with "Ashesh Ashesh". He's now a professor back home in 🇮🇳. Congrats! He pushed virtually all of the methods work with relentless will and skill. Thanks Ashesh! 🙏
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Florian Jug @florianjug.bsky.social · 05/05/2026
I will not tell you about the content of that paper here, because I did so last year (cringe, I spelled "imagine" with two 'm"?? Ahhh!): bsky.app/profile/flor... If our work is new to you today, enjoy that old thread. 👍 This little 🧵 from today will be more a "behind the scenes" thing... enjoy!
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Florian Jug @florianjug.bsky.social · 05/05/2026
It is finally out there in published form. 🎉 #MicroSplit (with an 𝕊) #Microscopy 🔬 #AI 🤖 www.nature.com/articles/s41... And no paywall... so... enjoy the read! 💸 👋 This is where the post could end... but I will have to go on for a bit below... 😉 🧵
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Florian Jug @florianjug.bsky.social · 05/05/2026
I love the quirky title "Mirco𝕊plit" with the split 'S'. And it is also funny to see how much trouble it causes... Thanks @natmethods.nature.com for still going with it! 🙏
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Florian Jug @florianjug.bsky.social · 23/04/2026
🤩 Now... THIS is a nice video about what @humantechnopole.bsky.social stands for! youtu.be/okWehgenNMM I feel well represented! 🤩 If you like what you see... why don't you check our open positions and join us?! Or... repost/send to people who might want to work with us?! 🙏 👍
youtu.be
Human Technopole: Connecting Science Across Scales
YouTube video by Human Technopole
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Florian Jug @florianjug.bsky.social · 23/04/2026
🚨 Amazing opportunity to start in the lab of Wolfram, who works on modeling cellular properties in close collaboration with experimentalists. Apply now! Join us @humantechnopole.bsky.social in beautiful 🇮🇹!
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Human Technopole @humantechnopole.bsky.social · 22/04/2026
💡 What does it take to build a research institute that truly serves human health and sets a new standard for how science is done? Read more here: humantechnopole.it/en/news/huma...
humantechnopole.it
Human Technopole scales up Italian science for Europe’s health future - Human Technopole
“Shaping the future of human health, together”: Human Technopole’s new claim was the central theme of the event held this morning at the Senate of the Republic. The conference “Human Technopole Founda...
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Florian Jug @florianjug.bsky.social · 13/04/2026
Any time Alister… at ANY time!!! 😉 ❤️ 📞 👂 -> 🤝
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QI@CSHL @qiatcshl.bsky.social · 11/04/2026
We tried other brands but nothing works quite like a Guinness for our light sheet microscope. Future collab?
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QI@CSHL @qiatcshl.bsky.social · 13/04/2026
We are getting serious about analysis. Today Hunter Elliott and @florianjug.bsky.social introduce machine learning and AI. It’s not magic, it’s computers.
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Florian Jug @florianjug.bsky.social · 07/04/2026
Look mum, I made it!!! 🎉 😉 @ellis.eu @humantechnopole.bsky.social
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Jan Funke @janfunkey.bsky.social · 02/04/2026
The Human Technopole brings together the expertise, infrastructure, and compute needed to develop AI across biological scales and data modalities. Below a 🧵 that explains what we have in mind. We are just getting started and are keen to hear from people who want to help shape our vision!
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Florian Jug @florianjug.bsky.social · 02/04/2026
And there is more: careers.humantechnopole.it/job/Postdoc-... Great opportunity in the @ioriolab.bsky.social of @francescoiorio.bsky.social!
careers.humantechnopole.it
Postdoc in Cancer Synthetic Lethality Prediction and AI-Driven Target Discovery
Postdoc in Cancer Synthetic Lethality Prediction and AI-Driven Target Discovery
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Florian Jug @florianjug.bsky.social · 02/04/2026
BONUS POST Job Portal of HT: → www.linkedin.com/company/htec... → www.linkedin.com/jobs/human-t... Open TODAY: → careers.humantechnopole.it/job/Postdoc-... → careers.humantechnopole.it/job/AI-Exper... And... closing the loop to 1/9... 😄 bsky.app/profile/flor...
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