Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 07/07/2026🚨New preprint!🚨 Lack of specific affinity reagents hinders studies of signalling mechanisms. We show that sdAbs provide a robust scaffold for making linkage-specific ubiquitin binders, exemplified by 2A6, a versatile reagent for M1-linked ubiquitin chains. www.biorxiv.org/content/10.6... 0159
Rune Busk Damgaard @rbdamgaard.bsky.social · 07/07/2026🚨New preprint!🚨 Lack of specific affinity reagents hinders studies of signalling mechanisms. We show that sdAbs provide a robust scaffold for making linkage-specific ubiquitin binders, exemplified by 2A6, a versatile reagent for M1-linked ubiquitin chains. www.biorxiv.org/content/10.6... 0159
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 26/03/2026Cell Stress & Inflammation - CSI - is my group's new name. We are still incredibly interested in ubiquitin, but our new name reflects a broadening scope in the lab, in part based on our recent paper (www.nature.com/articles/s41...). Visit our new website here: www.bioengineering.dtu.dk/csi 071
Rune Busk Damgaard @rbdamgaard.bsky.social · 26/03/2026Cell Stress & Inflammation - CSI - is my group's new name. We are still incredibly interested in ubiquitin, but our new name reflects a broadening scope in the lab, in part based on our recent paper (www.nature.com/articles/s41...). Visit our new website here: www.bioengineering.dtu.dk/csi 071
Reposted by Rune Busk DamgaardFletcher Lab @fletcherlab.bsky.social · 24/03/2026Receptor clustering is a common theme in viral detection, but whether detection directly hinders genome replication is less clear. Excited to share the Z in RZ-type E3s: ZNFX1 is an RNA helicase that builds ubiquitin chains leading to aggregates that ensnare viral RNA. www.cell.com/molecular-ce...cell.comZNFX1 uses two-component ubiquitin circuitry to quarantine viral RNASquair et al. show that ZNFX1 restricts ssRNA virus replication by integrating SF1 helicase activity with dual E3 ligase mechanisms. ATP-dependent RNA binding activates E3 function, driving self-propa... 31910
Rune Busk Damgaard @rbdamgaard.bsky.social · 16/03/2026I’d take a full review from a grumpy Reviewer #2 any day over student teaching evaluations. Students are savage. 040
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 07/03/2026More evidence that LUBAC has functions beyond inflammation: Our study shows that LUBAC regulates AMPK signalling to control metabolic adaptation, autophagy, and cell death. This might explain the metabolic problems observed in LUBAC deficiency and ORAS patients. www.nature.com/articles/s41...nature.comM1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress - Cell Death & DifferentiationCell Death & Differentiation - M1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress 0135
Rune Busk Damgaard @rbdamgaard.bsky.social · 07/03/2026More evidence that LUBAC has functions beyond inflammation: Our study shows that LUBAC regulates AMPK signalling to control metabolic adaptation, autophagy, and cell death. This might explain the metabolic problems observed in LUBAC deficiency and ORAS patients. www.nature.com/articles/s41...nature.comM1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress - Cell Death & DifferentiationCell Death & Differentiation - M1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress 0135
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 24/02/2026This project started with confusion 🤔 www.nature.com/articles/s41... Loss of LUBAC or OTULIN causes severe inflammatory disease. But patients also show clear metabolic defects. Neither LUBAC nor OTULIN had been linked to metabolic regulation. So where do these metabolic manifestations come from? 1189
Rune Busk Damgaard @rbdamgaard.bsky.social · 24/02/2026This project started with confusion 🤔 www.nature.com/articles/s41... Loss of LUBAC or OTULIN causes severe inflammatory disease. But patients also show clear metabolic defects. Neither LUBAC nor OTULIN had been linked to metabolic regulation. So where do these metabolic manifestations come from? 1189
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 16/02/2026🧐 What if metabolic defects are not just a consequence of inflammatory disease - but actively contribute to it? Inflammation and metabolism are deeply intertwined, but the molecular links remain unclear. Our new paper in Cell Death & Differentiation uncovers one. 🧵👇 nature.com/articles/s41... 23314
Reposted by Rune Busk DamgaardCraig A. Goodman @craigagoodman1.bsky.social · 16/02/2026M1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress www.nature.com/articles/s41...nature.comM1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress - Cell Death & DifferentiationCell Death & Differentiation - M1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress 043
Rune Busk Damgaard @rbdamgaard.bsky.social · 16/02/2026🧐 What if metabolic defects are not just a consequence of inflammatory disease - but actively contribute to it? Inflammation and metabolism are deeply intertwined, but the molecular links remain unclear. Our new paper in Cell Death & Differentiation uncovers one. 🧵👇 nature.com/articles/s41... 23314
Reposted by Rune Busk Damgaardfly paper broadcast @fly-broadcast.bsky.social · 14/02/2026M1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress #Drosophilapubmed.ncbi.nlm.nih.govM1-linked ubiquitination by LUBAC regulates AMPK signalling and the response to energetic stress #DrosophilaPubMed link 011
Reposted by Rune Busk DamgaardUK Cilia and Centrosome Network @ukcilianetwork.bsky.social · 11/02/2026Interesting article and accompanying spotlight on the cross-talk between ciliary homeostasis and ubiquitination (written by Jonathan Pruneda and @rbdamgaard.bsky.social). www.nature.com/articles/s41... www.nature.com/articles/s41...nature.comA tale of two tags: UFMylation counters ubiquitination for ciliary homeostasis - Cell Death & DifferentiationCell Death & Differentiation - A tale of two tags: UFMylation counters ubiquitination for ciliary homeostasis 021
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 29/01/2026💡 Ciliary homeostasis turns out to depend on an unexpected tug-of-war between UFMylation and ubiquitination. In a recent editorial in Cell Death & Differentiation, @jnpruneda.bsky.social and I highlight new work from Wang et al. 🧵👇 182
Rune Busk Damgaard @rbdamgaard.bsky.social · 29/01/2026💡 Ciliary homeostasis turns out to depend on an unexpected tug-of-war between UFMylation and ubiquitination. In a recent editorial in Cell Death & Differentiation, @jnpruneda.bsky.social and I highlight new work from Wang et al. 🧵👇 182
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 21/11/2025🚨 Postdoc position in my lab! A project on protein binder discovery for K6-linked #ubiquitin to investigate their role in infection is available. 📍 DTU, Copenhagen, Denmark ⏰ Deadline: 18 December 2025 Apply here: efzu.fa.em2.oraclecloud.com/hcmUI/Candid... 1713
Rune Busk Damgaard @rbdamgaard.bsky.social · 21/11/2025🚨 Postdoc position in my lab! A project on protein binder discovery for K6-linked #ubiquitin to investigate their role in infection is available. 📍 DTU, Copenhagen, Denmark ⏰ Deadline: 18 December 2025 Apply here: efzu.fa.em2.oraclecloud.com/hcmUI/Candid... 1713
Rune Busk Damgaard @rbdamgaard.bsky.social · 30/10/2025A #postdoc position in atypical #ubiquitin signalling and protein binder engineering is opening soon in my lab at DTU Bioengineering! Get in touch if you are interested. 073
Rune Busk Damgaard @rbdamgaard.bsky.social · 07/10/2025🚀 Off to our Research Retreat with the Section for Medical Biotechnology, DTU Biotechnology and Biomedicine. Two days of science, ideas & innovation 🧬💡 12 faculty pitches, 30+ PhDs & postdocs, and endless opportunities for new collaborations 🔬🤝✨ 020
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 16/09/2025A few months ago, our review “The Molecular Toolbox for Linkage Type-Specific Analysis of Ubiquitin Signaling” 🧬🧰🛠️ came out in ChemBioChem. Time to give it a spotlight! chemistry-europe.onlinelibrary.wiley.com/doi/full/10.... 1199
Rune Busk Damgaard @rbdamgaard.bsky.social · 16/09/2025A few months ago, our review “The Molecular Toolbox for Linkage Type-Specific Analysis of Ubiquitin Signaling” 🧬🧰🛠️ came out in ChemBioChem. Time to give it a spotlight! chemistry-europe.onlinelibrary.wiley.com/doi/full/10.... 1199
Rune Busk Damgaard @rbdamgaard.bsky.social · 14/08/2025Is it still useful to insist that authors spell out every protein name in research papers? Many names are long, obscure, and say nothing about function... we might as well call them James, Joan, and John. 030
Reposted by Rune Busk DamgaardTanentzapfLab @tanentzapflab.bsky.social · 13/08/2025The goal of a PhD is not to learn some facts or read a few papers or learn a bunch of techniques. The goal of a PhD is to learn independence, problem solving, how to finish things you start, resilience, & gain the ability to adapt & think creatively. Learning these things is hard. 433787
Reposted by Rune Busk Damgaardvictor @heldigt.bsky.social · 03/07/2025Jeg er godt træt af måden regeringens spareplan rammer universiteterne.klik1.information.dkRegeringens sult efter at afskaffe bureaukratiet er gået for vidt, når den nu rammer forskerneRegeringen hævder, at der med de nye besparelser på universiteterne ikke vil gå midler fra forskning. Men forskere arbejder ikke i et vakuum. Når administrationen fjernes, ryger tiden fra forskningen 031
Reposted by Rune Busk DamgaardRichard Sever @richardsever.bsky.social · 02/07/2025the really key number to remember is that biorxiv serves the entire global science community, posting thousands of papers per month for millions of readers, and it's entire running costs ( a few $M/year) are less than some single labs.... 24316
Reposted by Rune Busk DamgaardPrasad Jallepalli, MD, PhD @prasad.bsky.social · 23/05/2025it’s a global contest, whether we want to compete or watch from the sidelines 1223695
Reposted by Rune Busk DamgaardSakamoto Lab @labsakamoto.bsky.social · 16/05/2025Special day for our group @cbmr.science as we celebrate the successful defense of our (first) freshly minted PhD, Dr. Conchita Bringas 🥳 Her thesis was based on characterizing novel #AMPK inhibitors. Special thanks to the great committee @rbdamgaard.bsky.social ,Dave Carling & Lykke Sylow. 1156
Reposted by Rune Busk DamgaardDavid Vilchez @thevilchezlab.bsky.social · 15/05/2025We have a 4-year postdoc position open in our Research Unit on proteostasis! The project explores inter-tissue regulation using advanced proteomics approaches. Collaborative & interdisciplinary environment. More details & application here: jobs-uk-koeln.onlyfy.jobs/job/pktg6ivj...jobs-uk-koeln.onlyfy.jobsPostdoc Position (f/m/x)We are looking to support our rapidly growing team as soon as possible: 21411
Reposted by Rune Busk DamgaardFletcher Lab @fletcherlab.bsky.social · 13/05/2025Great to see this out. A story that spanned continents, cities and budget codes… www.nature.com/articles/s41... Big thanks to all the teams involved! @clausenlab.bsky.social @e3chembio.bsky.socialnature.comATP functions as a pathogen-associated molecular pattern to activate the E3 ubiquitin ligase RNF213 - Nature CommunicationsRNF213 is an E3 ligase with ATPase activity. Here, the authors show that RNF213 is activated by ATP binding and senses cellular energy states, and reveal a transthiolation mechanism induced by immune ... 35428
Rune Busk Damgaard @rbdamgaard.bsky.social · 13/05/2025Haven’t shared this in a while. But the #ubiquitin and #ubl Starter Pack now includes 116 profiles to follow if you’re interested in the field: signalling, structure and biochemistry, biology, mechanisms, proteostasis, TPD, chemical biology… Check out the list and let me know if you are missing. 0145
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 22/04/2025Happy to see our review out in ChemBioChem @chemistryeurope.bsky.social in which we describe the tools and strategies for deciphering linkage type-specific #ubiquitin signalling: doi.org/10.1002/cbic.... Thanks to Julian for spearheading this, and to Camilla and Dominik for important contributions. 1319
Rune Busk Damgaard @rbdamgaard.bsky.social · 22/04/2025Happy to see our review out in ChemBioChem @chemistryeurope.bsky.social in which we describe the tools and strategies for deciphering linkage type-specific #ubiquitin signalling: doi.org/10.1002/cbic.... Thanks to Julian for spearheading this, and to Camilla and Dominik for important contributions. 1319
Reposted by Rune Busk DamgaardElton Zeqiraj @zeqiraj.bsky.social · 17/03/2025Excited to report our latest research on new “molecular glues” that specifically lock the BRCC36 isopeptidase complex (BRISC) in an autoinhibited state and reduce interferon signalling. This first-of-its-kind approach could reshape how we target large deubiquitylase (DUB) complexes. rdcu.be/edRwF 55119
Reposted by Rune Busk DamgaardRandall Munroe @xkcd.com · 17/03/2025Lungfish xkcd.com/3064 95118511304
Reposted by Rune Busk DamgaardKristian Pedersen @pdrsn.bsky.social · 05/03/2025Nysgerrighedsdrevet, uafhængig forskning er en samfundssøjle - i disse tider er det mere tydeligt end nogensinde. Og EU har en særlig vigtig rolle. 064
Reposted by Rune Busk DamgaardThe Young Academy of Denmark @theyoungacademydk.bsky.social · 04/03/2025Ny kronik fra DUA i Dagbladet Information på baggrund af de verserende rygter om at ville indføre større politisk styring og strategisk prioritering af midlerne i ERC. 088
Reposted by Rune Busk DamgaardJesper Langergaard @jesperlangergaard.bsky.social · 05/03/2025European Research Council må ikke blive udvandet ifm forhandlingerne om EU’s forskningsbudget. ERC skal forblive en uafhængig enhed, der investerer i nysgerrighedsdreven forskning - for det er grundlaget for de nye indsigter, der driver vores samfund fremad. www.information.dk/debat/2025/0...information.dkDanske politikere må forsvare EU’s succesprogram for grundforskningEU’s program, der siden 2007 har støttet de bedste forskningsprojekter i Europa, er potentielt i fare. Hvis pengene i stedet går til projekter ud fra vurderet markedspotentiale, vil det koste på EU’s ... 0135
Rune Busk Damgaard @rbdamgaard.bsky.social · 21/02/2025What determines if a preprint from @biorxivpreprint.bsky.social is also indexed in PubMed? It appears some are, but others aren’t. Our recent preprint for some reason isn’t. Does one have to opt into that? Or how does it work? 202
Reposted by Rune Busk DamgaardYogesh Kulathu @kulathu.bsky.social · 16/02/2025Autophagy UK & Proteostasis UK joint meeting -June 3-5. Exploring the lifecycle of cellular components from synthesis to degradation. Going to be a great meeting and we look forward to welcoming you to Dundee! Exciting lineup of speakers and opportunities for ECRs Register here: tinyurl.com/mr3p49f9tinyurl.comJoint 2025 Autophagy UK and Proteostasis UK conference | University of Dundee, UKWelcome to the 2025 joint “Autophagy UK and Proteostasis UK” conference! 02324
Reposted by Rune Busk DamgaardJacob Corn @jcornlab.bsky.social · 30/01/2025Cells are filled with toxic stuff that damages healthy proteins. Is that garbage just left to rot on the curb? No way! Ubiquitin ligases have evolved to recognize chemical damage and clean it up! www.nature.com/articles/s41...nature.comC-terminal amides mark proteins for degradation via SCF–FBXO31 - NatureSCF–FBXO31 scans proteins for C-terminal amidation and marks them for subsequent proteasomal degradation. 210837
Reposted by Rune Busk DamgaardCarl Zimmer @carlzimmer.com · 28/01/2025American science and medicine has been thrown into chaos and uncertainty over the past week. Here are some stories to get up to speed. 1/12 5718161133
Reposted by Rune Busk DamgaardBjørn Panyella Pedersen @bjornppedersen.bsky.social · 27/01/2025🌱 We're hiring! Join our new ⭐Center of Excellence⭐, Plant-PATH, as Center Administrator and help us drive basic research in plant molecular biology🌱. www.au.dk/om/stillinge... #Science #dkforsk #dkscience #dkvid #JobOpening #Researchau.dkCenter Administrator for Center for Active Transport of Plant Hormones (Plant-PATH) - Ledig stilling på Aarhus UniversitetLedig stilling ved Institut for Molekylærbiologi og Genetik, Aarhus Universitet 0128
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 21/01/2025We made it to 100! 📢💯 The #ubiquitin and #ubl Starter Pack now includes 100 profiles to follow if you’re interested in any aspect of the field: signalling, structure and biochemistry, biology, mechanisms, proteostasis, TPD, chemical biology… Check out the list and let me know if you are missing. 13213
Rune Busk Damgaard @rbdamgaard.bsky.social · 21/01/2025We made it to 100! 📢💯 The #ubiquitin and #ubl Starter Pack now includes 100 profiles to follow if you’re interested in any aspect of the field: signalling, structure and biochemistry, biology, mechanisms, proteostasis, TPD, chemical biology… Check out the list and let me know if you are missing. 13213
Reposted by Rune Busk DamgaardArjun Raj @arjunraj.bsky.social · 17/01/2025I will say that AI has truly exposed what forms of writing we do is make-work vs. content with real meaning in it. I find that I still do all my paper writing by hand (with AI as more of an assistant) because it has (I hope) high "thought density". Other forms of writing… less so. 0121
Reposted by Rune Busk DamgaardArjun Raj @arjunraj.bsky.social · 17/01/2025Sure, writing is thinking and all that high-minded stuff, but when you're eyes are bleeding right before the deadline because you have to write a Project Summary that, uhhh, summarizes your project for the nth time… 2112
Reposted by Rune Busk DamgaardRune Busk Damgaard @rbdamgaard.bsky.social · 16/01/2025Despite all the bugs, they are still the future 🧑🎓 021
Rune Busk Damgaard @rbdamgaard.bsky.social · 16/01/2025Despite all the bugs, they are still the future 🧑🎓 021