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Michael White

@mtwhite.bsky.social
583 followers 368 following 24 posts

Infectious Disease Epidemiology & Analytics Unit, Institut Pasteur Epidemiology | Modelling | Serology | Malaria (esp vivax) | NTDs 🇮🇪🇪🇺🇫🇷

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Michael White @mtwhite.bsky.social · 03/09/2026
See below for an exciting post-doc opportunity at Institut Pasteur with my excellent colleague Aimee Taylor on Synthetic Data Simulation for Malaria Genomic Epidemiology. research.pasteur.fr/en/job/postd...
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Spyros Lytras @spyroslytras.bsky.social · 23/07/2026
Come work on exciting AI for biology projects in Paris!! 🇫🇷 Details and application below, deadline sept 1st!
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Nature Communications @natcomms.nature.com · 12/07/2026
The Serology Puzzle: Untangling Cross-Reactivity in Arbovirus Diagnostics #arbovirus #surveillance #serology #modelling #epidemiology @vyman.bsky.social @mtwhite.bsky.social dlvr.it/TTVCNH
The Cross-Reactivity Dilemma: In regions where similar viruses, such as Mayaro (MAYV) and Chikungunya (CHIKV), co-circulate, standard antibody tests (ELISA or RDTs) often struggle to distinguish them. Antibodies against MAYV E2 antigen (shown as red keys) can cross-react and bind to CHIKV E2 antigen (purple key). While true, specific binding is stronger (high-scale reading), this "noisy" cross-reactive signal makes it impossible to define positive samples without more advanced methods.
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Nature Communications @natcomms.nature.com · 09/07/2026
New blood test can distinguish between similar mosquito-borne viruses, thus contributing to better surveillance of how these infections spread #dengue #Zika #chikungunya @vyman.bsky.social @mtwhite.bsky.social
dlvr.it
New blood test may improve mapping of mosquito-borne viruses
Mosquito-borne viral diseases such as dengue, Zika and chikungunya are spreading to new regions as the climate becomes warmer. A new study from Karolinska Institutet and Institut Pasteur, published in Nature Communications, shows that a newly developed blood test can distinguish between similar viruses and thereby contribute to better surveillance of how these infections spread.
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Geoff McFadden @fad1.bsky.social · 07/06/2026
Today marks 30 years since we identified the apicoplast, a relict plastid in human and animal parasites (PMID 8632819). Apicoplasts are the target of the widely used antimalarial prophylactic doxycycline, which has saved many thousands of malaria infections.
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sylvain Brisse @sylvainbrisse.bsky.social · 04/06/2026
It's out! The LIN code approach for genomic taxonomy of microbial strains and its applications in genomic epidemiology journals.plos.org/plosbiology/...
journals.plos.org
Life Identification Numbers: A strain nomenclature approach to aid epidemiological surveillance of bacterial pathogens
Unified bacterial strain taxonomies are needed for coherent communication of findings in microbiological research. This Essay provides an overview of a novel bacterial strain taxonomy and describes ho...
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Timothy Gowers @wtgowers.bsky.social · 20/05/2026
OpenAI's claim that this is a central conjecture in discrete geometry is not an exaggeration. This will I think be looked back on as the first time that AI solved a major mathematics problem (defined as a problem that all experts in some subfield had thought about). openai.com/index/model-...
openai.com
An OpenAI model has disproved a central conjecture in discrete geometry
An OpenAI model solved the 80-year-old unit distance problem, disproving a major conjecture in discrete geometry and marking a milestone in AI-driven mathematics.
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Billy Quilty @bquilty.bsky.social · 13/05/2026
How have UK social contact patterns changed post-pandemic? How assortative are they by age, ethnicity, and socioeconomic status? Pleased to share our new @plosmedicine.org paper, jointly led by @lucygoodfellow.bsky.social and myself, with @kevinvzandvoort.bsky.social and John Edmunds. #IDSky
Seven heatmaps displaying social contact matrices, stratified by age, setting, ethnicity, and socioeconomic status. Colour gradients indicate the mean number of contacts, with lighter yellows and greens representing higher values and dark purples representing lower values.

Panel A shows total contacts by participant and contact age group, highlighting strong mixing between similar ages along the diagonal, and secondary parallel bands representing parent-child interactions.

Panels B through E break down these age contacts by setting. Home displays distinct family and intergenerational patterns, Work shows mixing primarily among working-age adults, School shows highly intense mixing restricted to school-age children, and Other settings display general age assortativity.

Panel F illustrates total contacts by ethnic group. It reveals strong assortative mixing, with the highest mean contact numbers occurring between individuals of the same ethnicity, specifically within White, Black, and Asian demographic groups.

Panel G displays total contacts by NS-SEC socioeconomic classification and life stage. This matrix demonstrates assortative mixing within similar occupational classes, alongside a notably high concentration of contacts among participants and contacts classified as under 17.
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Victor Yman @vyman.bsky.social · 15/04/2026
Excited to share our new paper out today in @natcomms.nature.com Combining multiplex serology, mathematical modelling, and experimental validation reveals arbovirus transmission dynamics despite cross-reactivity. (1/2)
nature.com
Investigating antibody cross-reactivity and transmission dynamics of alphaviruses and flaviviruses using a multiplex serological assay - Nature Communications
Arboviruses often co-circulate, but cross-reactivity hampers serological diagnostics. Here, the authors paired multiplex serology with competitive immunoassays and Bayesian modelling to quantify antib...
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Victor Yman @vyman.bsky.social · 15/04/2026
Work led by me, @jjrosados.bsky.social , and @mtwhite.bsky.social. A great collaboration with @noeochida.bsky.social, @scauchemez.bsky.social , and colleagues across the @pasteur.fr network. (2/2)
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Michael White @mtwhite.bsky.social · 02/04/2026
Solidarity with our colleagues in Institut Pasteur Iran. These are dedicated professionals doing their best for science and public health in challenging times.
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Philip Bejon @philipbejon.bsky.social · 06/01/2026
1/6 Our paper today – www.nature.com/articles/s41... work from Kenya - shows protective antibodies against falciparum malaria sporozoites work against sporozoites injected into the skin, not against sporozoites injected into veins. Why does this matter?
Anopheles mosquito.
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Institut Pasteur | 130 years of biomedical research @pasteur.fr · 08/12/2025
🔬 Call to create junior research groups at the Institut Pasteur Focus: Infectious diseases, host-microbe interactions, vaccines Special interest: AI methodologies 📅 Deadline: Feb 9, 2026 👥 2-12 years post-PhD Apply now 📝 research.pasteur.fr/en/call/crea... #JobOpportunity #Research
research.pasteur.fr
Creation of new junior research groups at the Institut Pasteur - Call for applications 2026 - Research
The Institut Pasteur is launching an international call to recruit new junior research group leaders leveraging cutting-edge transdisciplinary approaches to exploring infectious diseases, host-microbe...
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Michael White @mtwhite.bsky.social · 17/11/2025
A person is seropositive to an infectious disease if their antibody level is above some cutoff. But selecting this cutoff is surprisingly trickly. Our thoughts in this article. Whose Line Is it Anyway? Defining Seropositivity Cutoffs for Infectious Disease Surveillance doi.org/10.1093/infd...
doi.org
Validate User
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Darren Dahly @statsepi.bsky.social · 13/11/2025
Just to draw your attention to the HPSC's truly excellent data hub for respiratory illnesses. A great investment in disease surveillance capacity paying off. @hpscireland.bsky.social respiratoryvirus.hpsc.ie
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Institut Pasteur | 130 years of biomedical research @pasteur.fr · 28/10/2025
👩‍🔬 Cette semaine, 5 chercheuses de l’Institut Pasteur font la Une des médias ! De la santé des femmes au cancer, de la psychiatrie à l'intelligence artificielle... Leurs recherches font avancer la science. Thread ⤵️ 1/6
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Michael White @mtwhite.bsky.social · 21/10/2025
Delighted to be back in Institut Pasteur de Dakar for the kick-off of our EDCTP3 supported PvSeroRDT consortium. We will develop a new diagnostic test for detecting P. vivax malaria hypnozoites and set up manufacturing capacity with Diatropix in Senegal. Enormous thanks to our Senegalese hosts 🇸🇳
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Institut Pasteur | 130 years of biomedical research @pasteur.fr · 08/10/2025
Pour chaque vie, la science agit. Le Pasteurdon, c’est maintenant ! Soutenez la recherche et celles et ceux qui la font avancer ↘️ pasteurdon.fr #Pasteurdon
Pour chaque vie, la science agit. Le Pasteurdon, c’est maintenant ! Soutenez la recherche et celles et ceux qui la font avancer. Faites un don sur pasteurdon.fr
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Freddy Frischknecht @freddyfrischknecht.bsky.social · 02/10/2025
Beautiful beasts: excited to see our first volume electron microscopy study on malaria parasites published: advanced.onlinelibrary.wiley.com/doi/10.1002/... revealing new insights into Plasmodium ookinete development. Thanks for great EMBL-Umea-Heidelberg collaboration.
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Michael White @mtwhite.bsky.social · 16/09/2025
A great opportunity to work with the excellent Amy Thomas in Bristol.
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Kai Kupferschmidt @kakape.bsky.social · 03/09/2025
The minutes noted that “everyone was searched, including their vehicles, on the grounds that researchers might be carrying mosquitoes in their pockets.” #IDsky #malaria 🧪 www.science.org/content/arti...
science.org
After ‘humiliating’ raid, Burkina Faso halts ‘gene drive’ project to fight malaria
Disinformation campaign may have triggered “brutal” shutdown of mosquito lab
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Cassandra Koh 🦟🔬🧪 @cassandrakoh.bsky.social · 28/07/2025
📣 I'm recruiting a postdoc researcher to join my team for a project on mosquito-specific viruses and host interactions. Peep the job description & how to apply below. Perfect for soon-to-be or recent PhD graduates in mosquito vector biology 🦟 or arbovirology 🦠 🗓️ Application deadline 31 August 2025
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Athene Donald @athenedonald.bsky.social · 24/07/2025
Paperback publication day! Have a good read. Things changing far too slowly for #womeninSTEM
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WEHI (The Walter and Eliza Hall Institute of Medical Research) @wehi-research.bsky.social · 14/07/2025
🧬50 years of impact 🌍 From #malaria breakthroughs to global collaborations, our researchers have transformed the field of #parasitology – and they’re not done yet. Find out more: www.wehi.edu.au/news/from-a-...
Researchers in the Infection and Global Health division, with co-heads Professor Ivo Mueller (front left) and Associate Professor Chris Tonkin (front right). Immunoparasitology lab researchers in 1977, left to right: Colin Chapman, Karen Day, Russell Howard, Emanuela Handman and lab head Graham Mitchell. WEHI’s Graham Brown with locals in Papua New Guinea, in the 1980s. Glory Mzembe (left) from the Training and Research Unit of Excellence in Malawi, came to WEHI to advance her skills in data analysis as part of her work with Dr Rebecca Harding (right) on a world-first anaemia trial.
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James Hay @jameshay.bsky.social · 11/07/2025
We're hiring a modelling postdoc at PSI Oxford for two exciting projects: 1) modelling the early immune responses to Nipah vaccination, and 2) joining the PRESTO team working on immunobridging in vaccine evaluation studies. tinyurl.com/5abbxrjh Get in touch for more info! Deadline 4th August.
tinyurl.com
Job Details
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The Author, Séamas O'Reilly @seamas.bsky.social · 11/06/2025
The UK's paternity leave is the worst in Europe. It frustrates dads, burdens mums, and impoverishes us all. The fight for better parental leave is not just a demand for common decency, but for common sense. observer.co.uk/news/opinion...
observer.co.uk
Dads deserve a better paternity deal – so does the economy
New fathers who want to bond with their babies are treated in a derisory way in the UK – and that harms us all
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Jeremy Berg @jeremymberg.bsky.social · 12/06/2025
Today and tomorrow: International Meeting on Mirror Biology at the Pasteur Institute www.pasteur.fr/en/home/rese... Bluetorial to follow
pasteur.fr
Institut Pasteur To Host International Meeting on Mirror Biology
The Institut Pasteur will host an international conference on June 12-13, 2025 addressing the potentially unprecedented risks of mirror life, organized in partnership with the Mirror Biology Dialogues...
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Chiara Poletto @chpoletto.bsky.social · 19/05/2025
Between 2018 and 2020, the www.malakit-project.org distributed kits for malaria self-diagnosis and self-treatment to gold miners in French Guiana In this work out on ‪@lancetrh-americ.bsky.social‬ we have used modelling to assess the impact of the intervention www.thelancet.com/journals/lan...
thelancet.com
Evaluating the impact of the Malakit intervention on malaria transmission in the Guiana Shield: a mathematical modelling study
Malakit had a significant impact on malaria transmission by improving the access to treatment for the population working in illegal gold mining in French Guiana. Building on the regional efforts of th...
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Jason Rosado @jjrosados.bsky.social · 11/06/2025
This work began in 2019 during my PhD, with the help of @drshaziaruybal.bsky.social. After navigating a pandemic, finishing my PhD, and changing labs, I am pleased to share our work on a modest #ampseq panel for #P.vivax. This panel is designed to facilitate molecular corrections in clinical trials
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Fi @loveiresong.bsky.social · 04/06/2025
Respect to Krishnan Guru-Murthy here.
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Simon Cauchemez @scauchemez.bsky.social · 05/06/2025
New postdoc positions with a number of exciting epidemic modelling projects opening in our Unit at @pasteur.fr in beautiful Paris. Deadline for applications: 26th June. research.pasteur.fr/en/job/postd...
research.pasteur.fr
Postdoctoral positions in epidemic mathematical/statistical modelling - Research
Job description We are recruiting postdocs to contribute to research projects in the Mathematical Modelling of Infectious Diseases Unit, at Institut Pasteur in Paris. The candidates will be expected t...
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Yellow4FLAVI @yellow4flavi.bsky.social · 02/06/2025
🔬Spotlight on women’s leadership in Yellow4FLAVI! Dr. Barba-Spaeth @giobarbaspaeth.bsky.social, a molecular & structural virologist, coordinates research on how YF17D vaccine structure drives immunity, unlocking new paths for next-gen vaccines.💉🧠 More on our site: www.yellow4flavi.eu/post/women-s...
yellow4flavi.eu
Women’s leadership in Yellow4FLAVI
We’d like to shine a spotlight on Dr. Giovanna Barba-Spaeth, Coordinator of the Yellow4FLAVI Horizon Europe funded project and Head of the Flavimmunity Group at Institut Pasteur. 1️⃣ What is your back...
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Michael White @mtwhite.bsky.social · 26/05/2025
Calling diagnostics developers. If you know any companies in your network that can develop portable readers for RDTs, please check out the following request for proposals coordinated by FIND. Can include standalone readers or mobile-phone based systems. urldefense.com/v3/__https:/...
urldefense.com
Calls for partners - FIND
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ᐯIᑕTOᖇ ᑎIᘔET, ᗰᗪ @nizet.bsky.social · 25/05/2025
Powerful new tool against Malaria (𝘕𝘢𝘵𝘶𝘳𝘦) Instead of killing mosquitoes, bed nets coated with ELQs (endochin-like quinolones) KILL THE MALARIA PARASITES INSIDE THE INSECTS. Infected mosquitoes land, absorb the drug through their legs, and are rendered parasite-free www.nature.com/articles/s41...
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The Lambrechts Lab @lambrechtslab.bsky.social · 20/05/2025
Great new study from the Dickson lab @utmb.bsky.social reveals how the microbial environment of Aedes aegypti larvae affects #ZIKV transmission. #Mosquitoes raised in urban containers (plastic buckets) are more susceptible than those from forest habitats (coconut husks) dx.plos.org/10.1371/jour...
dx.plos.org
Reduced microbe abundance in an urban larval development container increases Aedes aegypti susceptibility to Zika virus
Author summary Aedes aegypti mosquitoes, which spread viruses like dengue and Zika, inhabit different environments within Africa. Ancestral forms of Ae. aegypti occupy forested habitats, while domesti...
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Athene Donald @athenedonald.bsky.social · 19/05/2025
Delighted to announce the paperback edition of my book Not Just for the Boys: Why we need more women in science, will be published in July
Not Just for the Boys by Athene Donald
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London School of Hygiene & Tropical Medicine @lshtm.bsky.social · 07/05/2025
Could a new malaria jab really finish off the disease? In @telegraphnews.bsky.social, Chris Drakeley comments on efficacy of first-generation #malaria vaccines as GSK say they want to develop a jab that's 3 times as effective by 2035. @lshtm-malaria.bsky.social www.telegraph.co.uk/global-healt...
telegraph.co.uk
Could a new malaria jab really finish off the disease? Researchers at GSK have high hopes
Exclusive: Next-generation jab could be three times as effective as the best currently available
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Vittoria Colizza @vcolizza.bsky.social · 29/04/2025
So excited today as we launch the Sorbonne Université Modeling Outbreaks Center (SUMOC) - a hub dedicated to strengthening our ability to understand, anticipate, and respond to infectious disease threats. @sorbonne-universite.fr @fac-sante-sorbonne.bsky.social @inserm.fr @anrs-mie.bsky.social
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Darren Dahly @statsepi.bsky.social · 25/04/2025
More evidence, now from Ireland, that infant immunisation with nirsevimab substantially reduced risks for hospitalisation due to RSV. Feedback very welcome, as well as suggestions for an eventual home. www.medrxiv.org/content/10.1...
medrxiv.org
Surveillance-based estimation of the impact of introducing a pathfinder programme for nirsevimab immunisation in Ireland on infant hospitalisations due to respiratory syncytial virus in 2024/2025
Respiratory syncytial virus (RSV) presents a significant health risk to young infants and substantially burdens already stretched health systems every winter. Ireland launched a RSV immunisation pathf...
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Thomas House @tah-sci.com · 10/04/2025
Analytics / Stats / Modelling jobs in Ireland - working for rough equivalent of CDC / UKHSA but each country is different. Well-paid, permanent, interesting jobs somewhere nice to live. about.hse.ie/jobs/job-sea...
about.hse.ie
Statistician Senior NRS14677
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Eric Topol @erictopol.bsky.social · 02/04/2025
The vaccine against Shingles helps protect against dementia, results of a natural experiment, adding to prior evidence "implications are profound" New @nature.com www.nature.com/articles/d41... nature.com/articles/s41...
nature.com
A natural experiment on the effect of herpes zoster vaccination on dementia - Nature
Using a natural experiment that avoids common bias concerns, this study finds that the live-attenuated shingles vaccine reduced the probability of a new dementia diagnosis within a follow-up period of...
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Darragh Duffy @darraghduffy.bsky.social · 29/03/2025
Our new study quantifies sex steroid hormone changes with age in women & men, with strong impact of genetics, contraception, smoking, BMI & lifestyle often in sex specific ways @immunobladder.bsky.social @milieuinterieur.bsky.social @pasteur.fr 🧪#immunosky #medsky www.science.org/doi/epdf/10....
science.org
Steroid hormone levels vary with sex, aging, lifestyle, and genetics
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BK. Titanji @boghuma.bsky.social · 28/03/2025
I stand in solidarity with all of my colleagues who do health equity research. This work matters for the communities we serve. This week has been catastrophic for grant cancelations and our communities are hurting terribly. Please share and stand with us in solidarity.
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Matt Novak @paleofuture.bsky.social · 26/03/2025
Video of the international student at Tufts being arrested by "federal authorities" in Massachusetts has been released and it's terrifying. They're not even uniformed officers. Just secret police thugs in hoodies and masks. From WCVB: youtu.be/PuFIs7OkzYY
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hmenager.bsky.social @hmenager.bsky.social · 24/03/2025
📢 permanent research engineer position as leader of the Hub Algorithmics & AI pole at the Institut Pasteur. Come and join us! More details on research.pasteur.fr/en/job/perma...
research.pasteur.fr
Permanent research engineer position as Head of Hub Algorithmics & AI pole - Research
The Hub of Bioinformatics and Biostatistics provides analytical support to research units and platforms at the Institut Pasteur. The Hub is committed to this mission through:  As head of the Algorithm...
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Marc Veldhoen @marcveld.bsky.social · 23/03/2025
Ultra long-lived plasma cells in the human small intestine produce microbiota-reactive IgA antibodies Pre-print. IgA is secreted at epithelial barriers and and important tool to keep pathogens at bay, especially in the intestine. Where is all this IgA produced? www.biorxiv.org/cont... 1/4
biorxiv.org
Ultra long-lived plasma cells in the human small intestine produce microbiota-reactive IgA antibodies
A large fraction of the intestinal microbiota is highly coated with secretory IgA, and bacteria-specific IgA is believed to shape the composition of the microbiota. A hallmark of the adaptive immune system is immunological memory to specific antigens. However, whether there is strong and persistent memory of secretory antibodies to bacterial antigens has not been determined. Here we show that ultra long-lived CD19-CD45- (age>20 years) plasma cells (PCs) residing in the human small intestine produce IgA that binds to most taxa of a diverse anaerobic microbiota culture. Long-lived CD19-CD45+ (age>10 years) and short-lived CD19+CD45+ (age<2 years) PCs also produced IgA with broad bacterial reactivity. A clear correlation between high-binding and low-binding taxa was observed across the PC subsets. We also found that host PCs were depleted in acute intestinal graft versus host disease, a condition strongly associated with loss of microbiota diversity. Together, we show that bacterial antigens in the intestine induce an extremely stable, long-lasting humoral immune memory that may be important for the long-term stability and resilience of the intestinal microbiome. ### Competing Interest Statement The authors have declared no competing interest.
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Marc Veldhoen @marcveld.bsky.social · 20/03/2025
Freedom of speech? Don't travel to the US, it is not save French scientist denied US entry after phone messages critical of Trump found France’s research minister said the scientist was traveling to Houston for a conference when his phone was searched www.theguardian.com/... 1/2
theguardian.com
French scientist denied US entry after phone messages critical of Trump found
France’s research minister said the scientist was traveling to Houston for a conference when his phone was searched
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Michael White @mtwhite.bsky.social · 18/03/2025
Beautiful study of primaquine treatment to prevent vivax malaria relapses from Jean Popovici's team from Pasteur Cambodia. The study is special because patients were moved to a non-endemic part of Cambodia, excluding reinfection from msoquitoes. authors.elsevier.com/sd/article/S...
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Michael White @mtwhite.bsky.social · 18/03/2025
Beautiful study of primaquine treatment to prevent vivax malaria relapses from Jean Popovici's team from Pasteur Cambodia. The study is special because patients were moved to a non-endemic part of Cambodia, excluding reinfection from msoquitoes. authors.elsevier.com/sd/article/S...
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