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Leslie Day, PhD

@lesliedaymicro.bsky.social
71 followers 76 following 33 posts

Anaerobic Microbiologist Damon Runyon Fellow Postdoc @ O’Toole Lab, Dartmouth

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Reposted by Leslie Day, PhD
George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 01/10/2026
JB Editor's Choice: Stoner, Fairbanks-Mahnke & Clark have written a really fantastic review on the complex interactions of Prevotella with the host and other microbes during infection. journals.asm.org/doi/10.1128/... @asm.org #JBacteriol @microsky.bsky.social
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John Spear @spearmicrobe.bsky.social · 04/09/2026
Microbial Diversity 2026 @mblscience.bsky.social was outstanding this year! If you’d like to join us next year, apply in late January, early February and spread the word. www.youtube.com/watch?v=7VUY...
youtube.com
Focus on: Microbial Diversity at Marine Biological Laboratory
YouTube video by Marine Biological Laboratory
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Marine Biological Laboratory @mblscience.bsky.social · 02/09/2026
Go behind the scenes of the Microbial Diversity summer course, where 20 early-career researchers spend almost seven weeks discovering, cultivating, and studying microbes alongside leading scientists. 🔗 go.mbl.edu/yyedyy
go.mbl.edu
Focus on: Microbial Diversity at Marine Biological Laboratory
Microbes are having a big moment at the Marine Biological Laborator...
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Leslie Day, PhD @lesliedaymicro.bsky.social · 01/09/2026
A beautiful look into the magical experience of the microbial diversity course @mblscience.bsky.social www.mbl.edu/news/focus-m...
mbl.edu
Focus on: Microbial Diversity at Marine Biological Laboratory | Marine Biological Laboratory
Microbes are having a big moment at the Marine Biological Laboratory.  Go behind the scenes of the Microbial Diversity summer course, where 20 early-career researchers spend almost seven weeks discove...
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 27/08/2026
New in JB: Ntamubano, Parker & Kozik review the current state of Prevotella taxonomy and argue for the the need for more mechanistic studies to understand the role of this microbe in the oral, respiratory & vaginal tracts. journals.asm.org/doi/10.1128/... @asm.org #JBacteriol @microsky.bsky.social
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Marine Biological Laboratory @mblscience.bsky.social · 26/08/2026
Many students come to the Marine Biological Laboratory for a course, and often, they find their way back. That was the case for John Spear, who took the Microbial Diversity course in 1998 and now returns as a course director. 🔗 Read more here: go.mbl.edu/take5-spear
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Fabrice Jean-Pierre @fabricejpierre.bsky.social · 11/08/2026
New preprint from my lab with @jpcote.bsky.social! In this short report, we present new data suggesting that cystic fibrosis highly effective modulator therapy (such as Trikafta) can impact the capacity of P. aeruginosa to form high biofilm-forming communities. Check it out! #microsky
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Evgenii Protasov @evgenii-protasov.bsky.social · 08/08/2026
Hypophosphite Is a Naturally Occurring Selective Inhibitor of Syntrophic Methanogenesis #methanogenesis #methane doi.org/10.1021/acs....
doi.org
Hypophosphite Is a Naturally Occurring Selective Inhibitor of Syntrophic Methanogenesis
Abstract. Microbial methanogenesis is a major contributor to global warming, and methane fluxes represent a loss of energy and electrons from industrial ec
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Leslie Day, PhD @lesliedaymicro.bsky.social · 08/08/2026
New fav seminar question. Should we be eating things off the floor? @geiselbiofilm.bsky.social gets the people wondering about the gut microbiome in the context of CF and beyond!
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Marine Biological Laboratory @mblscience.bsky.social · 04/08/2026
Join us on August 7 for George O'Toole's lecture on the “gut-lung axis” and how it may open new possibilities for treating airway disease with gut-targeted probiotics. Free and open to the public for in-person and virtual attendance. 🔗 More info here: go.mbl.edu/fel
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 30/07/2026
How does one conceive of time for Earth's history & the time of humans on the planet?? Go back to the basics - 1000 sheet role of toilet paper. John Spear lead the lesson and showed how little time humans have been on the planet - just a small fraction of one sheet. @mblscience.bsky.social
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Teresa O'Meara @teresaomeara.bsky.social · 29/07/2026
Bacteriology-Focused Assistant Professor Position in Microbiology and Immunology at the University of Michigan Application deadline: August 15, 2026 Come be my colleague!
Bacteriology-Focused Assistant Professor Position in Microbiology and Immunology at the University of Michigan

Application deadline: August 15, 2026

Applicants are requested to send
1) A cover letter (up to 1 page)
2) A CV
3) A description of research interests and goals (up to 2 pages)
4) A description of teaching experience and philosophy (up to 1 page)
5) Contact information including email to solicit 3 letters of recommendation.
Application materials should be combined into one PDF and addressed to the department chair, Dr. Bethany Moore, and sent via email to Sheryl Smith - sherylhs@umich.edu
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Leslie Day, PhD @lesliedaymicro.bsky.social · 28/07/2026
🎉🎉🎉🎉🎉
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Hypothesis Fund @hypothesisfund.bsky.social · 28/07/2026
✨ Meet our newest awardees, who are wading into the unknown to uncover new knowledge about the origin of complex life, antimicrobial peptides, social behavior, regeneration, and cell development. Learn about their projects: bit.ly/HFAwardees and hear from their #HFScouts in our 🧵 /1
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Dr. Ari Kozik @drkozik.bsky.social · 18/07/2026
With Prevotella recently split into many new genera (over 55 species down to ~21!), what's left? Our new review explores the remaining mucosal species, with a particular focus implications for the human oral, airway, and vaginal niches. 🧪 Journal of Bacteriology journals.asm.org/doi/10.1128/...
journals.asm.org
The redefined identity of Prevotella: new implications for oral, respiratory, and vaginal health | Journal of Bacteriology
Over a century ago, Dr. William Wherry and his student, Wade Oliver, reported the isolation of a bacterium they called Bacterium melaninogenicus (1). This organism was described as a pigmented, Gram-negative, strictly anaerobic organism found frequently in the human mouth on carious teeth, but also recovered from the throat, tonsils, genitalia, and wound abscesses. Later classified under the genus Bacteroides, these and related organisms were frequently described as difficult to grow and maintain in pure culture, with biochemical assays yielding inconsistent fermentation and proteolytic profiles (2, 3). In 1947, Schwabacher, Lucas, and Rimington found that the characteristic pigments were not composed of melanin, as the name suggests, but rather hematin (4). In the 1960s, others showed that some strains required both hemin and vitamin K/vitamin K derivatives for growth (5). Consequently, as similar organisms were isolated from human oral and mucosal sites in the following decades, Shah and Collins proposed the reclassification of several species into their own genus, Prevotella, in 1990. Shah and Collins had previously argued that Bacteroides contained considerable heterogeneity, particularly with regard to fermentative capacity. They suggested that inclusion in Bacteroides should be limited only to highly fermentative species phenotypically similar to B. fragilis. The “nonsaccharolytic Bacteroides” were reclassified into the genus Porphyromonas, while the remaining 15 “moderately saccharolytic Bacteriodes” became Prevotella. Using a combination of biochemical and 16S rRNA-based analyses, they described Prevotella as organisms that may or may not produce pigment, are sensitive to bile salts, are moderately saccharolytic, and lack both glucose 6-phosphate dehydrogenase (G6PDH) and 6-phosphogluconate dehydrogenase (6PGDH) (6).
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Leslie Day, PhD @lesliedaymicro.bsky.social · 09/07/2026
I love my job
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Reposted by Leslie Day, PhD
George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 07/07/2026
In Microbial Diversity we understand that all life can be explained in one slide (or why one should NEVER memorize glycolysis). @mblscience.bsky.social
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 23/06/2026
Our Dept of Microbiology & Immunology @Geisel School of Medicine @Dartmouth has an opening for an Assistant Professor. Looking for programs bridging multiple areas in Micro & Immuno. A great place to be! Programs: www.M2P2.org www.dartmouthbiofilm.org Job ad: apply.interfolio.com/187637
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Leslie Day, PhD @lesliedaymicro.bsky.social · 22/06/2026
Highly recommend adding whimsy to your lab whenever possible w/@maggiepren.bsky.social
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MCB Graduate Program at Dartmouth @mcbdartmouth.bsky.social · 18/06/2026
🚨 Thesis Seminar Alert: Nicole Kordana from the Cramer Lab will be presenting her research tomorrow at 10am in Chilcott! 🦠
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ASM @asm.org · 10/06/2026
Outer membrane vesicles (OMVs) secreted by Bacteroides can be an important mechanism of host-pathogen interactions in the colon by reducing CFTR Cl⁻ secretion; the effects on CFTR Cl⁻ secretion depend on the strain of Bacteroides fragilis. #IAIJournal: asm.social/2Y7
Representative en face images of human colon organoids on Transwell filters. (A) DAPI labeling of nuclei. (B) Chromogranin A immunofluorescence of enterochromaffin cells. (C) Immunofluorescence of MUC2. (D) Composite of panels A–C revealing that MUC2 and Chromogranin A are expressed in different cell types. (E) Immunofluorescence of SLC26A3 (DRA, a Cl⁻/HCO⁻3 exchanger). (F) DAPI labeling of nuclei. (G) Composite of panels E and F. Scale bar in panel g is 50 μm
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Pedro Leão @pedroleao.bsky.social · 05/06/2026
I'm happy to share the first pre-print of out Lab! 🎉 Introducing ArchaeaHQ www.biorxiv.org/content/10.6... We curated 21,644 genomes across all 4 archaeal kingdoms to bridge the gap in public datasets for computational biology What is inside ArchaeaHQ... (1/2)
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Marine Biological Laboratory @mblscience.bsky.social · 04/06/2026
Your mouth is home to its own highly specialized microbial community. New research suggests that these oral microbes may play an equally important role as the gut microbiome in maintaining health. Read the full story here: go.mbl.edu/mouth-microbe
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Leslie Day, PhD @lesliedaymicro.bsky.social · 03/06/2026
May the whimsy of showing mentees rumen fluid under the scope never go away
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BWJones @bwjones.bsky.social · 31/05/2026
This is why we fund basic science. You never know from what little curiosity will derive the tools that enable greatness.
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Gregory A. Wilson @gregoryawilson.com · 26/05/2026
It is with enormous joy that I announce that with $5534.56 raised (and a bit more to come!), #ArvCon2026 concludes having again met its goal to support @damonrunyon.org! I'll have a more detailed set of thank yous in a few days, but until then: thank you so much to everyone who made this possible!
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Gregory A. Wilson @gregoryawilson.com · 20/05/2026
#ArvCon2026 to benefit @damonrunyon.org begins with our Pre-Show TOMORROW, Thursday the 21st at 7:30 p.m. ET...please mark your calendars for an event full of community, giveaways, surprises, interviews, music, and--of course--lots of TTRPGs! Please spread the word, and we'll see you tomorrow night!
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Leslie Day, PhD @lesliedaymicro.bsky.social · 19/05/2026
Who needs a sauna when you can work in an anaerobic chamber on a warm summer day before the AC has caught up
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Reposted by Leslie Day, PhD
Gregory A. Wilson @gregoryawilson.com · 15/05/2026
Finally, Day Four of #ArvCon2026 wraps up at 3:15 p.m. EDT with a special one-shot TTRPG adventure in the Gumshoe system, featuring @damonrunyon.org scientists @lesliedaymicro.bsky.social, @txrwang.bsky.social, and Hui Chiu as players, and @therisingtithes.bsky.social as GM! 11/?
twitch.tv
ArvanEleron - Twitch
I'm Arvan Eleron, a writer and gamer. My favorite games are RPGs, particularly tabletop D&D, but I'm also a sucker for a good adventure or turn based strategy game (and I love Gran Turismo, if I can e...
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Gregory A. Wilson @gregoryawilson.com · 15/05/2026
Day Two of #ArvCon2026 begins on May 23rd at 12 p.m. EDT with an interview of amazing @damonrunyon.org scientists @lesliedaymicro.bsky.social, @txrwang.bsky.social, and Hui Chiu! 4/?
twitch.tv
ArvanEleron - Twitch
I'm Arvan Eleron, a writer and gamer. My favorite games are RPGs, particularly tabletop D&D, but I'm also a sucker for a good adventure or turn based strategy game (and I love Gran Turismo, if I can e...
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Evgenii Protasov @evgenii-protasov.bsky.social · 10/05/2026
The extreme halophilic archaeon Haloferax volcanii reduced Fe(III) to conserve energy from extracellular electron transfer #microbiology #archaea #Haloferax #MicroSky #ArchaeaSky @asm.org journals.asm.org/doi/10.1128/...
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Olivier Borkowski @oborkowski.bsky.social · 06/05/2026
Breathing both ways: simultaneous aerobic–anaerobic respiration in microbes doi.org/10.1016/j.ti...
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Gordon Hodson @gordonhodsonphd.bsky.social · 30/04/2026
#AcademicSky #Stats Sometimes, statistical/methods concepts are best captured in an image. 👇
Person standing at bus stop. Map shows straight line with stops. But in reality the road curves. Text: "All models are wrong, but some are useful" George Box
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Richard Lenski @relenski.bsky.social · 01/05/2026
The Barrick & Lenski Labs in Dept of Microbiology, Genetics, & Immunology at Michigan State Univ seek a Research Assistant II to manage their research operations and participate in projects related to microbial evolution and synthetic biology. See details below. careers.msu.edu/jobs/researc...
careers.msu.edu
Research Assistant II - East Lansing, Michigan, United States
Position Summary The Barrick and Lenski Labs in the Department of Microbiology, Genetics, & Immunology at Michigan State University are seeking a Research Assistant II to manage their research ope...
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MichaelMcMurray lab @mcmurraylab.bsky.social · 22/04/2026
Doing the periodic cleaning of used plasmid miniprep columns and realized in honor of Earth Day it may be worth reminding you molecular biologists: Plasmid miniprep columns can be cleaned and reused essentially indefinitely! Just add 1 M HCl, soak overnight and wash 3x w/ water. Save $ and plastic
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Buzz Baum @buzzbaum.bsky.social · 09/04/2026
🎉 This is also a symbolic moment for the field: around 50 years since Carl Woese and colleagues first recognised Archaea as a distinct domain of life, fundamentally changing our understanding of evolution.
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Raphael Laurenceau @raphael-microb.bsky.social · 16/04/2026
🔈Paper out! We turned the most fascinating phage host-switch mechanism, diversity-generating retroelements, into a programmable mutagenesis tool, DGRec. You can perform targeted hypermutation of any 50-200bp sequence directly in vivo in E. coli www.nature.com/articles/s41...
nature.com
Diversity-generating retroelements for programmable targeted hypermutagenesis - Nature Biotechnology
Diversity-generating retroelements are engineered for directed evolution in E.coli.
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Cameron Thrash @jcamthrash.bsky.social · 12/04/2026
Breathing both ways: simultaneous aerobic–anaerobic respiration in microbes www.cell.com/trends/micro... #jcampubs
cell.com
Breathing both ways: simultaneous aerobic–anaerobic respiration in microbes
Microorganisms have historically been classified as obligate aerobes or anaerobes, facultative anaerobes, or microaerophiles, reflecting differences in respiratory strategies dictated by the use of ox...
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Evgenii Protasov @evgenii-protasov.bsky.social · 07/04/2026
Prokaryota Locomota 🪄! No, #microbes don't move by magic 😃. There are a number of ways and gliding motility is just one of them. Read more in a review from Journal of Bacteriology 🤓 #microbiology #bacteria #MicroSky @asm.org doi.org/10.1128/jb.0...
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 02/03/2026
Our newest paper by Sarvesh Surve, a PhD student in the lab, explores the culturome of the regions of the gut for persons with CF. We see clear differences from healthy controls, esp. in the mucosal samples. journals.asm.org/doi/10.1128/... @asm.org #JBacteriology
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 27/02/2026
Excited about a recent paper from Bassam el Hafi, a recently graduated PhD student, & Fabrice Jean Pierre leveraging 4,200 respiratory microbiomes from CF (pre- and post-ETI), and testing one of the hypotheses that arose from this analysis. journals.asm.org/doi/10.1128/... @asm.org #JBacteriology
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Damon Runyon Cancer Research Foundation @damonrunyon.org · 04/02/2026
Major breakthroughs in cancer research can come from the most unexpected sources. This World Cancer Day, we celebrate the curiosity that drives our scientists to look for answers in unusual places.
vimeo.com
What does that have to do with cancer?
Current and former Damon Runyon scientists explain why breakthroughs can come from unusual places, and why Damon Runyon's funding strategy is so important.…
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 28/01/2026
A must read! The constant and often irrational renaming of microbes is out of control, and bad for microbiology and microbiologists. journals.asm.org/doi/10.1128/...
journals.asm.org
The disputed identity of Pseudomonas putida KT2440: when taxonomists rename your favorite microbe | mBio
Names matter; they are not mere labels. They operate as anchors of memory, social coordinates, and references of collective identity. When a name becomes established through long-term use and broad ad...
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 14/01/2026
The Microbial Diversity courseis top-notch! Hoping to see you there! www.mbl.edu/education/ad...
mbl.edu
Microbial Diversity | Marine Biological Laboratory
The goal of the course is to teach professors, postdocs and advanced graduate students how to discover, cultivate, and isolate diverse microorganisms catalyzing a breadth of chemical transformations, ...
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Damon Runyon Cancer Research Foundation @damonrunyon.org · 31/12/2025
No one organization can fill the gaps created by federal funding cuts to research. But as an independent funder, Damon Runyon is committed to ensuring that our scientists can continue their lifesaving work in 2026 and beyond. Until midnight, all gifts will be fully matched: damonrunyon.org/donate
vimeo.com
Damon Runyon scientists on the impact of slashing research funding
Damon Runyon scientists explain how drastic cuts in federal research funding threaten progress in cancer research, and how Damon Runyon can help protect the breakthroughs…
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The ADA Forsyth Institute @adaforsyth.bsky.social · 23/12/2025
New from AFI researchers Jennifer Gundrum and Drs. Tabita Ramirez-Puebla, Jessica L. Mark Welch, and Gary G. Borisy: Novel FISH method overcomes cell wall barriers, enabling clearer insight into complex microbial communities. Learn more: journals.asm.org/doi/10.1128/...
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ASM @asm.org · 15/12/2025
The 2025 Agar Art Contest winners have been selected! This year’s theme, “Microbes Make the World Go Round,” inspired 557 global entries—from food fermentation to antibiotic production. See the masterpieces and finalists! asm.org/press-releas... #agarart
"The Hidden Power of Microorganisms: No microbes, no life…”“Self-portrait of Saccharomyces Cerevisiae.”“Circles of Life: Microbes in Motion.”
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Leslie Day, PhD @lesliedaymicro.bsky.social · 09/12/2025
@archaeabio.bsky.social can maybe help here?
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Evgenii Protasov @evgenii-protasov.bsky.social · 07/12/2025
The latest and most detailed review on a fundamental biochemical pathway: #glycolysis #microbiology #biochemistry onlinelibrary.wiley.com/doi/full/10....
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