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Kitty Clouston

@kittyclouston.bsky.social
208 followers 448 following 35 posts

Engineering microbes for greener chemical production Into biotech, heavy music, climate & social justice 📍Edinburgh / Bangalore linktr.ee/kittyclouston

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Reposted by Kitty Clouston
Nature Synthesis @natsynth.nature.com · 16/09/2026
Now online: Rethinking selectivity in alkene hydrogenation 🧪
go.nature.com
Rethinking selectivity in alkene hydrogenation
Nature Synthesis, Published online: 16 September 2026; doi:10.1038/s44160-026-01151-zAlthough catalyst development has transformed alkene hydrogenation into a reliable synthetic tool, controlling regioselectivity between closely related alkenes continues to challenge even the most sophisticated catalytic systems. Now, a multifunctional phosphorus-mediated proton relay directs priority towards more substituted alkenes, delivering divergent products under exceptionally mild conditions
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Reposted by Kitty Clouston
The Wallace Lab @swallacelab.bsky.social · 16/07/2026
New paper from our lab, led by @jfcsteele.bsky.social and @biowacko.bsky.social! Here we screen natural enzyme variants with genetic and process optimizations to produce an efficient system to convert lignin-derived waste (guaiacol) into nylon precursor, adipic acid. pubs.acs.org/doi/full/10....
pubs.acs.org
Heterologous Rieske Nonheme Iron Monooxygenases Enable Efficient Microbial Conversion of Lignin Guaiacol to Adipic Acid
Adipic acid (1,6-hexanedioic acid) is a key building block for nylon-6,6, a widely used polymer in the global chemical industry. Current industrial production relies on petrochemical feedstocks and nitric acid oxidation of cyclohexane/cyclohexanol mixtures, releasing nitrous oxide, a potent greenhouse gas. Biotechnological routes offer sustainable alternatives but have been limited by low yields or reliance on multistrain systems. Here we report a one-pot, single-strain microbial process for the efficient conversion of guaiacol─a lignin-derived aromatic─into adipic acid. By integrating heterologous Rieske nonheme iron monooxygenases from Cupriavidus necator N-1 with systematic process optimizations in engineered Escherichia coli, we achieve near-quantitative conversion with 97% yield and titers of 1.5 g/L in aqueous, lab-scale reactions. This work demonstrates a novel and efficient strategy for lignin valorization through engineered microbial synthesis, providing a new sustainable and scalable route to adipic acid.
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New Scientist @newscientist.com · 23/03/2026
Researchers have created the first living synthetic bacterium made from non-living parts by killing a bacterial cell and then transplanting the genome of another species into it, blurring the boundary between life and death
newscientist.com
'Zombie' cells created by transplanting genomes into dead bacteria
Researchers have created the first living synthetic bacterium made from non-living parts by killing a bacterial cell and then transplanting the genome of another species into it, blurring the boundary between life and death
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MC Squared @mcsquared.bsky.social · 11/03/2026
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George Monbiot @georgemonbiot.bsky.social · 10/03/2026
I wasn't intending to turn this into a thread, but it seems to have happened anyway. It's about the great plague on our lives: the extreme wealth of a tiny number of people. And what to do about it.
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Nature Plants @natplants.nature.com · 02/03/2026
New Editorial: "Celebrating photosynthesis" rdcu.be/e6oTm Photosynthesis is both an elegantly simple and dazzlingly complex process. The year 2026 marks anniversaries of the discoveries of both of these layers.
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Carl Zimmer @carlzimmer.com · 18/02/2026
Scientists have seen Asgard archaea crawling for the first time. When it comes to the origin of eukaryotes, this is like seeing a feathered dinosaur in the wild. (Video courtesy of Philipp Ralder)
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Toby Buckle @polphilpod.bsky.social · 12/02/2026
i appreciate labour taking a stronger line on racism but it's a little incongruous when they're separating families, smearing asylum seekers as "illegal", & making the lives of legal residents harder to appease that same bigotry
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Boas Pucker @bpucker.bsky.social · 09/02/2026
Need a genome sequence of your favourite plant? We laid out instructions for a complete workflow based on ONT sequencing: "Cookbook for plant genome sequences" doi.org/10.1186/s128... #Genomics #LongReads #PlantSciences #Bioinformatics @puckerlab.bsky.social @unibonn.bsky.social
Plant genome sequencing workflow. Details: https://doi.org/10.1186/s12864-026-12623-z
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Theo Sanderson @theo.io · 08/02/2026
I made a map of 3.4 million Bluesky users - see if you can find yourself! bluesky-map.theo.io I've seen some similar projects, but IMO this seems to better capture some of the fine-grained detail
bluesky-map.theo.io
Bluesky Map
Interactive map of 3.4 million Bluesky users, visualised by their follower pattern.
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Reposted by Kitty Clouston
Jose Jimenez @jjimenez.bsky.social · 11/02/2026
Reposting this paper now with a working link! 😅 www.sciencedirect.com/science/arti...
sciencedirect.com
Engineering whole-cell catalysts to use plastic waste as a feedstock
The extensive production, durability, and waste mismanagement of plastic polymers have led to a highly concerning environmental problem. Recycling met…
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Reposted by Kitty Clouston
The Wallace Lab @swallacelab.bsky.social · 10/02/2026
🚨 2 Fully Funded PhD Projects | Open to UK students 🚨 ♻️ We’re recruiting another 2 PhD students to join The Wallace Lab as part of the Carbon-Loop Sustainable Manufacturing Hub, tackling some prolific but unconventional industrial waste streams! Apply by 27th Feb 🗓️ Details below ⬇️ Project 1.
findaphd.com
Bio-upcycling Waste Human Hair into Sustainable Haircare Chemicals at University of Edinburgh on FindAPhD.com
PhD Project - Bio-upcycling Waste Human Hair into Sustainable Haircare Chemicals at University of Edinburgh, listed on FindAPhD.com
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John Steele @jfcsteele.bsky.social · 02/02/2026
You can't think about a sustainable chemical industry without considering our most abundant energy source: sunlight. So how can we engineer microbes to harness this energy for our benefit? rdcu.be/e1VfW
rdcu.be
Interfacing solar energy with bacterial metabolism for sustainable chemical synthesis
Nature Reviews Clean Technology - Phototrophic bacteria could be used for chemical manufacturing from various carbon sources. This Review discusses the pathways, engineering and potential...
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James Barrett @james-r-barrett.bsky.social · 30/01/2026
How does molecular valency shape condensate assembly and function? We used the CO2-fixing organelle in algae—the pyrenoid—to find out… 🧵 Preprint here!: www.biorxiv.org/content/10.6... @cellarchlab.com @phaips.vd.st @biologyatyork.bsky.social #Rubisco #PhaseSeparation #Condensates #Pyrenoid
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Centre for Synthetic Biology @TUDarmstadt @synbio.bsky.social · 02/02/2026
Check out the the Coli Toolkit (CTK): an extension of the modular yeast toolkit for use in E. coli published in ACS Synthetic Biology by the group of Heinz Koeppl @tuda.bsky.social pubs.acs.org/doi/10.1021/...
pubs.acs.org
The Coli Toolkit (CTK): An Extension of the Modular Yeast Toolkit for Use in E. coli
Genetic circuits are a cornerstone of synthetic biology, enabling programmable control of cellular behavior for applications in health, sustainability, and biotechnology. While Genetic Design Automati...
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STCmicrobeblog @stcmicrobeblog.bsky.social · 02/02/2026
#ProtistsOnSky no 'swimming' by 𝘝𝘢𝘮𝘱𝘺𝘳𝘦𝘭𝘭𝘢, definitively no 'staying still'. just a relaxed walk towards the lunch...
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Ed Rybicki 🇿🇲🇿🇦🇬🇧🍷🚀 @edrybicki.bsky.social · 02/02/2026
I know I've shared this before, but seeing as I've just pulled it out for a PhD student for an obscure SDS-PAGE staining technique - CuCl2, as it happens - here it is again. A free SDS-PAGE and western blotting manual! www.researchgate.net/publication/...
researchgate.net
(PDF) Manual of SDS-PAGE and Immunoblotting Techniques
PDF | This is a compilation made from Web pages that no longer exist, that were heavily accessed by people looking for basic methods for SDS-PAGE and... | Find, read and cite all the research you need...
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Kitty Clouston @kittyclouston.bsky.social · 30/01/2026
🔬 Our shiny new mega review is finally published! If you’re interested in photosynthesis, engineering biology and sustainable chemistry, check it out ⬇️
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Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social · 30/01/2026
FoldMason is out now in @science.org. It generates accurate multiple structure alignments for thousands of protein structures in seconds. Great work by Cameron L. M. Gilchrist and @milot.bsky.social. 📄 www.science.org/doi/10.1126/... 🌐 search.foldseek.com/foldmason 💾 github.com/steineggerla...
science.org
Multiple protein structure alignment at scale with FoldMason
Protein structure is conserved beyond sequence, making multiple structural alignment (MSTA) essential for analyzing distantly related proteins. Computational prediction methods have vastly extended ou...
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Kitty Clouston @kittyclouston.bsky.social · 30/01/2026
🔬 Our shiny new mega review is finally published! If you’re interested in photosynthesis, engineering biology and sustainable chemistry, check it out ⬇️
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Birmingham 81 @birmingham81.bsky.social · 30/01/2026
Happy 45th birthday to Once in a Lifetime by Talking Heads, released as a single on this day in 1981. Here's David introducing that video
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The Wallace Lab @swallacelab.bsky.social · 30/01/2026
🚨 PhD opportunity | Fully funded | Open worldwide 🚨 ♻️ We’re recruiting a fully funded PhD student to join The Wallace Lab at the University of Edinburgh as part of the Carbon-Loop Hub, a £14M national programme re-imagining how chemicals are made. Apply by 20th Feb 2026 🗓️ Details below ⬇️
findaphd.com
Microbial Systems for the Bio-Upcycling of Industrial Waste Streams into High-Value Chemicals at University of Edinburgh on FindAPhD.com
PhD Project - Microbial Systems for the Bio-Upcycling of Industrial Waste Streams into High-Value Chemicals at University of Edinburgh, listed on FindAPhD.com
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The Wallace Lab @swallacelab.bsky.social · 30/01/2026
🚀 New review paper out! We explore the current achievements and future potential of solar-driven bacterial metabolism to unlock greener routes to chemical synthesis, spotlighting opportunities and challenges for light-powered microbial biomanufacturing 🌞🔬
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Lars Eicholt @lacholt.bsky.social · 28/01/2026
Check out our new review in Nature Reviews Genetics on de novo emerged genes and proteins. How they emerge, are lost and persist - and how de novo emerged proteins relate to randomized proteins! @bornberglab.bsky.social www.nature.com/articles/s41...
nature.com
Emergence and evolution of protein-coding de novo genes - Nature Reviews Genetics
De novo gene evolution entails the birth of new genes from previously non-coding DNA. In this Review, Bornberg-Bauer and Eicholt overview how protein-coding de novo genes are identified, the mechanist...
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Talia al Ghoul 🏳️‍⚧️ @usili.bsky.social · 28/01/2026
Bilbo looking at his phone top

on bottom is ChatGPT

After all, why not? Why shouldn't I keep it?

You're absolutely right — you found it, it's been with you a long while, and it's only natural to feel fond of something that's served you so well, especially when someone like Gandalf suddenly seems to want it for himself.
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Kitty Clouston @kittyclouston.bsky.social · 22/01/2026
This is what it means to lead by example
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David Shaywitz @dshaywitz.bsky.social · 19/01/2026
Loved this from @simonmaechling.bsky.social - chemistry FTW… @dereklowe.bsky.social @carolynbertozzi.bskyverified.social
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Stephen Curry @scurry.bsky.social · 19/01/2026
All done with the tacit approval of the @royalsociety.org, an organisation that has sadly lost its way and yet still claims to speak for the scientific community. It doesn't speak for me.
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Journal of Experimental Botany @jxbotany.bsky.social · 16/01/2026
✂️🧬 EDITOR’S CHOICE 🧬✂️ Frangedakis et al. present an improved method for generating complex CRSIPR-mediated genome modifications in Marchantia polymorpha using the tRNA-gRNA approach together with an optimized protocol for thallus transformation. 🔗 doi.org/10.1093/jxb/... #PlantScience 🧪
Fig. 1.Schematic diagram of tRNA-gRNA multiplexing for plant genome editing. (A) A plasmid is constructed containing a tRNA-gRNA cassette driven by the U6 promoter, together with a transcription unit for Cas9 expression. (B) After transformation into the plant, the primary RNA transcript is cleaved by the endogenous tRNA-processing enzymes RNase P and RNase Z, resulting in functional guide RNAs for genome editing.
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George Monbiot @georgemonbiot.bsky.social · 16/01/2026
It is the source of so many of our evils: the astonishing concentration of wealth in the hands of a very few, and the immense political power that gives them. We cannot solve our problems until we tackle it. This week's column. www.theguardian.com/commentisfre...
theguardian.com
At the root of all our problems stands one travesty: politicians’ surrender to the super-rich | George Monbiot
There are many excuses for failing to tax the ultra-wealthy. The truth is that governments don’t tackle the problem because they don’t want to, says Guardian columnist George Monbiot
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Nature @nature.com · 15/01/2026
Nature research paper: Ultra-high-throughput mapping of genetic design space go.nature.com/49CZvoe
go.nature.com
Ultra-high-throughput mapping of genetic design space - Nature
CLASSIC is a high-throughput genetic profiling platform that combines long- and short-read next-generation-sequencing modalities to quantitatively assess pools of constructs of arbitrary length containing diverse genetic part compositions.
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Kitty Clouston @kittyclouston.bsky.social · 07/01/2026
Thrilled to share our latest publication: Chlamydomonas chloroplast genes tolerate compression of the genetic code to just 51 codons | PNAS 🧬 Grateful to all involved! www.pnas.org/doi/10.1073/... @alisonsmith25.bsky.social @camplantsci.bsky.social @andreholzer.bsky.social
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Prof Rachel Oliver @profrachelgan.bsky.social · 12/01/2026
Following coverage over the weekend of Sir Paul Nurse's comments that suggested that the only reason that a Fellow should be expelled from @royalsociety.org is scientific misconduct, I have written to him to explain the risks such an attitude poses of increasing sexual harassment in STEM.
Dear Sir Paul,

Re: Royal Society Code of Conduct

I am sure that many scientists have written to you about the specific question of Elon Musk’s Fellowship and whether, under the Royal Society’s Code of Conduct, his retaining that Fellowship is appropriate. I will not rehash these issues.  Instead, as a female scientist with extensive experience of activities aiming to increase equality, diversity and inclusion in the engineering and physical sciences sector, I am writing to you (in a personal capacity) to ask you to reconsider the statements you have recently made in this context to the UK press about the Royal Society’s Code of Conduct and how it is applied.  

A 2018 report  from the joint National Academies of the United States of America, concluded that “sexual harassment is common in academic science, engineering, and medicine” and that “greater than 50 percent of women faculty and staff and 20–50 percent of women students encounter or experience sexually harassing conduct in academia”.  This report described codes of conduct that make clear that sexual harassment is unethical and will not be tolerated as a “powerful incentive for change”. The authors also noted that sexual harassment can have significant and damaging effects on the integrity of research.  In my own praxis, I have found that clear and consistently-implemented codes of conduct that address these issues make female scientists and engineers safer, and allow them to focus more effectively on their research.  For codes of conduct to have such a positive effect, it is vital that sanctions for actions which transgress the code are meaningful and substantial.

I was hence aghast to realise that in an interview with the Financial Times  published on 9/1/26, you appear to have suggested that the Royal Society “should only expel fellows if their science proved “faulty or fraudulent or highly defective””.  Moreover, in a further interview with the Guardian  on 11/1/26 you suggested that the code “may need to be looked at again”, with the implication that your aim would be to remove the option of sanctions on Fellows for reasons not strictly related to faults or defects in their research. 

I suggest that changing the Royal Society’s code of conduct so that the likelihood of serious sanctions for sexual harassment is reduced, would directly endanger women who interact with the Royal Society at events or otherwise, and would provide a licence to harass to the already powerful people on whom the Society bestows fellowship.  The implications of your words - that under your leadership the only infringements of the code which are likely to receive the sanction of the Fellowship being removed are those related to research misconduct - already risk empowering harassers.  You stated, in the Financial Times interview, that “there’s many bad people around, but they have made scientific advances”.  Given this awareness of the possibility of bad actors in our scientific community, it is wholly irresponsible to suggest that the Royal Society would not act to sanction these people if they harass more vulnerable scientists.

I am hence writing to request that you retract any suggestion that the Society’s Code of Conduct should be changed so that the only reason a Fellow might be sanctioned by the removal of their Fellowship is “faulty or fraudulent or highly defective” research.  This action is necessary to safeguard female scientists, a requirement placed on the Society by safeguarding legislation and UK statutory guidance. 

Yours sincerely,

Professor Rachel A. Oliver.
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Stephen Curry @scurry.bsky.social · 12/01/2026
Rachel raises a very serious issue in her letter. I hope Nurse will respond and clarify the position of the @royalsociety.org
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George Monbiot @georgemonbiot.bsky.social · 07/01/2026
If the Palestine Action hunger strikers die - which they could do at any moment, as they are now very close to the end - it will be the government that killed them. Today’s column explains why. Please share, and write urgently to your MP. www.theguardian.com/commentisfre...
theguardian.com
Let’s be clear: if the Palestine Action hunger strikers die, the government will bear moral responsibility | George Monbiot
The three remaining hunger strikers have been convicted of nothing. Yet with astonishing cruelty, ministers refuse to listen to their reasonable demands, says Guardian columnist George Monbiot
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Carla Denyer @carladenyer.bsky.social · 08/01/2026
The Palestine hunger strikers have been on hunger strike for over 60 days and are close to death. They have not even been convicted of a crime - they are being held on remand (pre-trial) for more than twice the max time allowed, and counting…🧵
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Angel Goñi-Moreno @angelgm.eurosky.social · 08/01/2026
New paper out!📢 Exploring the computing power of microbes that shapes the environment. In this short review we talk about the "complexity gap", the distance between bottom-up genetic circuits and microbial information processes. Key questions to improve #biocomputation. 🔗 doi.org/10.1016/j.mi...
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Stephen Curry @scurry.bsky.social · 07/01/2026
As I said this am, work on social mobility “will rub up against powerful interests who see no difficulty in being able to buy advantages in life, but society is crying out for institutions that give anyone a fair shake, whatever their circumstances/background.” www.theguardian.com/education/20...
theguardian.com
Cambridge college to target elite private schools for student recruitment
Exclusive: Trinity Hall’s new policy described as a ‘slap in the face’ for state-educated students
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Ryo Yokoyama @yokoyama-ryo.bsky.social · 07/01/2026
Chlamydomonas chloroplast genes tolerate compression of the genetic code to just 51 codons | PNAS www.pnas.org/doi/10.1073/... @pnas.org
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Olivier Borkowski @oborkowski.bsky.social · 07/01/2026
Model-guided design of regulatable promoters for synthetic biology doi.org/10.1016/j.mi...
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Jill Harrison @jillharrison.bsky.social · 06/01/2026
Love this really cool method for gene editing briwn algae- greens or lycophytes next? www.cell.com/cell-reports...
cell.com
Efficient CRISPR-Cas genome editing in brown algae
Brown algae, a key yet understudied lineage of multicellular eukaryotes, have long lacked tools for functional genomics. Martinho et al. introduce a high-efficiency, transgene-free CRISPR platform ena...
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Global Justice Now @globaljusticenow.bsky.social · 07/01/2026
"It should not be necessary to risk your life to demand fair treatment and just decisions. But when everyone in power has stopped listening, there are few remaining options." Powerful piece via @georgemonbiot.bsky.social for @theguardian.com www.theguardian.com/commentisfre...
theguardian.com
Let’s be clear: if the Palestine Action hunger strikers die, the government will bear moral responsibility | George Monbiot
The three remaining hunger strikers have been convicted of nothing. Yet with astonishing cruelty, ministers refuse to listen to their reasonable demands, says Guardian columnist George Monbiot
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John Steele @jfcsteele.bsky.social · 07/01/2026
@kurzgesagt.org have some fantastic videos. This could be a great opportunity and comes at a time when having accurate and trustworthy information is more vital than ever!
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Kitty Clouston @kittyclouston.bsky.social · 07/01/2026
Thrilled to share our latest publication: Chlamydomonas chloroplast genes tolerate compression of the genetic code to just 51 codons | PNAS 🧬 Grateful to all involved! www.pnas.org/doi/10.1073/... @alisonsmith25.bsky.social @camplantsci.bsky.social @andreholzer.bsky.social
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Nature Biotechnology @natbiotech.nature.com · 18/12/2025
Engineered base editors with reduced bystander editing through directed evolution - @geochurch.bsky.social @harvardmed.bsky.social @wyssinstitute.bsky.social go.nature.com/4qmupbv
go.nature.com
Engineered base editors with reduced bystander editing through directed evolution - Nature Biotechnology
Base editors are made more precise through deaminase and gRNA engineering.
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Kathrin Rousk @kathrinrousk.bsky.social · 28/11/2025
@stuartmcdaniel.bsky.social @fernway.bsky.social @jcarlosvillarreal.bsky.social @pierremarcdelaux.bsky.social ...know anyone who would like to come to #Copenhagen for 2 years to work with us on the evolution of symbioses? employment.ku.dk/all-vacancie...
employment.ku.dk
Postdoc position in Terrestrial Ecology: Terrestrial Nitroplast in Moss-Cyanobacteria Interactions
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Nick Desnoyer @nickdesnoyer.bsky.social · 01/12/2025
The hidden danger of Biorender (& the death of scientific illustration) A short thread 🧵
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Annis Richardson @drannisr.bsky.social · 10/11/2025
Are you looking for a PhD in Plant Science? Check our our project on barley canopy architecture. Combine genetics and physics to understand how awns influence barley grain development. Find out more here: lnkd.in/eWhWammJ Apply by 14th December. #PhDPosition #PlantSci @instmolplantsci.bsky.social
lnkd.in
LinkedIn
This link will take you to a page that’s not on LinkedIn
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The Wallace Lab @swallacelab.bsky.social · 29/10/2025
The Wallace Lab is expanding in 2026, with five new Postdoctoral Research Associate positions now open. If you're passionate about engineering biology for sustainability, we'd love to hear from you! 🧬 ♻️ Deadline: 12th November 2025, details below ⬇️
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Nature @nature.com · 21/10/2025
Musings on manifesting a world of sanitary homes and hospitals, and thoughts on an essay that defines rhythm, in this week’s pick from the Nature archive go.nature.com/49aKFqA
go.nature.com
Hopes of realizing a dream ‘city of health’
Snippets from Nature’s past.
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