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Joseph W. BRRRAAAIIINNNSSS

@josephwb.bsky.social
2.6K followers 474 following 3.8K posts

Comp. evol. biol., fake ornithologist, LFHCfs, Luddite, CSH I get down methodically Without regard to my soul tinyurl.com/G00gleSch0lar HHGG bot: @whalepetunias.bsky.social pfp: Chickens exposed to natural beard hair on a mannequin hdr: socks & sandals

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Reposted by Joseph W. BRRRAAAIIINNNSSS
Tom Near @tjnear.bsky.social · 4h
Paleobotanists, come be our colleague at the wonderful Yale Peabody Museum! apply.interfolio.com/194803
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Reposted by Joseph W. BRRRAAAIIINNNSSS
Andrew Rambaut (🐏🎀) @arambaut.bsky.social · 7h
Version 1.3.2 of PearTree released: github.com/artic-networ... Fixes many of the remaining niggling bugs. WebApp updated at peartree.live
The logo of the PearTree phylogenetic tree viewer app - a partridge in a pear tree.
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RES Publications @respublications.bsky.social · 9h
New research in #RESSystematicEnt #Phylogenomics reveals the evolutionary relationships between nesting and brooding behaviours and morphological structures in vespid #wasps doi.org/10.1111/syen... #Vespidae #Morphology #Behaviour @gkergoat.bsky.social @wileyecology.bsky.social
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Jeff Wilson Mantilla @diapophysis.bsky.social · 7h
Just a reminder that certain colors cannot be discriminated by around 5% of the population. Especially in the run-up to the @societyofvertpaleo.bsky.social meeting, think about choosing colorblind-friendly colors for display. There are many resources for this, but colorbrewer2.org is great.
graph showing principal components analysis of landmark data from neck vertebrae of birds discriminating different diving styles.
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LinearA @linearao3.bsky.social · 9h
Anything set in Europe or the US prior to 1900 where the characters correspond using 8 1/2 x 11 paper, and more annoying still when the letters are written in contemporary trifold style, and worse yet when they’re supposed to be women’s letters.
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Joseph W. BRRRAAAIIINNNSSS @josephwb.bsky.social · 9h
In grade 2 I went out for Halloween dressed as a detective: trench coat, fedora, sunglasses, magnifying glass. For weeks afterwards I continued to wear the fedora...
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Systematics Association @systassn.bsky.social · 12h
Student or recent graduate working on any aspect of taxonomy/systematics/phylogenetics? Want to present at a friendly, FREE online conference? Then send us your abstracts by Saturday, October 24!!! REGISTER: tinyurl.com/bdzxt2ht (Psst, the earlier you send abstracts, the less we pester for them!)
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Reposted by Joseph W. BRRRAAAIIINNNSSS
Chanda Prescod-Weinstein 🌌 @chanda.blacksky.app · 11h
I don't use GenAI because I want to be capable of doing my work. I want my work to be my work. I want my successes to be *my* successes. And I want to do the work that I can only do if I don't have GenAI getting in my way. Each author and intellectual should have this conversation with themselves.
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Joseph W. BRRRAAAIIINNNSSS @josephwb.bsky.social · 10h
Although restricted to carbon dating, this video by @tomlumperson.bsky.social is one of my all-time favourite pieces of sci-com: funny, entertaining, and informative. youtu.be/XN758QmTus0?...
youtu.be
How Did We Even Figure Out Carbon Dating?
YouTube video by Tom Lum
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Reposted by Joseph W. BRRRAAAIIINNNSSS
Brian O'Meara @omearabrian.bsky.social · 11h
Reminder to graduating PhD students looking for postdocs in the US: this is the fallow period when: 1) NSF historically does not release many awards 2) Universities are starting to look at faculty applications but not making offers (so no new startups) It should look better in a few months. 🧪
Line plot of NSF grants awarded per day, two week rolling average, for this year (red line), last year (blue line) and previous years (grays). The year starts out low (January) but increases to have a pulse of activity July through September
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Alexa Robles-Gil @alexaroblesgil.bsky.social · 12/10/2026
Scientists have long wanted to understand the neural basis for camouflage in cephalopods. How does the cuttlefish, which studies suggest is colorblind, take in the visual world and project it on its skin in as little as a second? My latest for the NYT: www.nytimes.com/2026/10/12/s... #marinelife
nytimes.com
How Do Cuttlefish Hide? Scientists Search for the Secret to Camouflage. (Gift Article)
Cephalopods are masters of camouflage. Scientists want to decipher how the process works in the brain.
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Graham Coop @gcbias.bsky.social · 12/10/2026
Interviewer: can you explain this gap in your CV? Genomicist: Once you include an outgroup, you'll see that it's actually an insertion in the career of other candidates
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Brian O'Meara @omearabrian.bsky.social · 12/10/2026
The offense getting BayesTreePrior banned? Apparently, not changing the previously approved Maintainer field to an Authors@R field. So no one can install it from CRAN in the usual way any more, and links to its PDF of functions are broken. #Rstats Pkg info: ajolicoeur.wordpress.com/bayesiantrees/
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Silas Tittes @silastittes.bsky.social · 12/10/2026
Final version of Gabby Coffing’s last chapter! Reviewer’s made some good suggestions. Nice paper I’m proud to have played a role on! 🐙 academic.oup.com/mbe/advance-...
academic.oup.com
Diversity and divergence of two sympatric, sibling octopus species
Abstract. Coleoid cephalopods have convergently evolved many traits shared with vertebrates, including camera-type eyes, large brain-to-body size ratios, a
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Reposted by Joseph W. BRRRAAAIIINNNSSS
Martin Paul Eve @mpe.hcommons.social.ap.brid.gy · 09/10/2026
The people holding up the internet sheets.works/data-viz/holding-up-th…
sheets.works
The people holding up the internet
Four billion phones ask one text file what time it is. One lecturer keeps it in his spare time. We counted the rest.
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Stephen Wild @stephenjwild.bsky.social · 11/10/2026
If you want to see a really good example of the big data paradox in action: www.nature.com/articles/s41...
nature.com
Unrepresentative big surveys significantly overestimated US vaccine uptake - Nature
An analysis of three surveys of COVID-19 vaccine behaviour shows that larger surveys overconfidently overestimated vaccine uptake, a demonstration of how larger sample sizes can paradoxicall...
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Richard McElreath 🐈‍⬛ @rmcelreath.bsky.social · 11/10/2026
We really need to make Meng's Big Data Paradox central to teaching, don't we? Researchers don't know this stuff bc they have never been exposed to it. But it is fundamental. (Link to paper PDF statistics.fas.harvard.edu/sites/g/file...)
3. Compensating for quality with quantity is a doomed game.
3.1. A law of large populations? Under a probabilistic sampling, a central
driving force for the stochastic behaviors of the sample mean (and alike) is the
sample size n. This is the case for the Law of Large Numbers (LLN) and for the
Central Limit Theorem (CLT), two pillars of theoretical statistics, and of much of
applied statistics because we rely on LLN and CLT to build intuitions, heuristic
arguments, or even models. However, identity (2.3) implies that once we lose control of probabilistic sampling, then the driving force behind the estimation error is
no longer the sample size n, but rather the population size N. Specifically, (2.3)
and (2.5) together imply that
(3.1) Zn,N ≡ Gn − GN

VSRS(Gn)
= ρR,G1−f
f σG
1−f
n S2
G
= √
N − 1ρR,G.
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Rachel Slote-Brown @rachelsb.bsky.social · 11/10/2026
It’s Halloween Knits for #showmeyourknits this week! Here I am wearing my Arachne sweater to the pumpkin patch last year. #knitsky #ArachneSweater #knitting #SweaterKnitting
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Carl rothfels @crothfels.bsky.social · 10/10/2026
USU is hiring a microbiologist and an avian biologist! Both positions tenure-track, starting in 2027. These will be great positions in a great department--please reach out if you have any questions!
careers-usu.icims.com
Assistant Professor of Biology - Microbiology in Logan, Utah | Careers at Logan Campus
The Department of Biology (www.biology.usu.edu) is seeking to fill a tenure-track (1.0 FTE, 9-month, 50% research, 40% teaching, 10% service) position in the area of microbiology to start in the Fall ...
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Tristan A.F. Long @thelonglab.bsky.social · 10/10/2026
My favourite part of this poster design is that is a “myriorama” (inspired by @tomgauld.bsky.social’s “Endless Journey” cards), meaning the sections can be cut out and re-arranged in 10! (i.e. 3,628,000) different combinations! #SciArt
One of over 3 million different permutations of the 10 myriorama cardsAnother of the over 3 million different permutations of the 10 myriorama cardsyet another combination of the 10 myriorama cardsOne more combination of cards!
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Ben de Bivort @debivort.bsky.social · 09/10/2026
Are you interested in supporting scientific research and teaching focused on living things and the natural world? My department, Organismic and Evolutionary Biology is hiring two full-time Lab Coordinators (faculty assistants). Union jobs with good benefits. careers.harvard.edu/job/laborato...
Telephoto shot of four meerkats standing with yellow grass and blue sky in the background
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Casey terHorst @ecoevolab.bsky.social · 09/10/2026
The stand-alone meeting of the American Society of Naturalists @asn-amnat.bsky.social in an old mansion on Long Island is starting to book up! Registration is open until Nov 1 OR until we hit 200 registrants, so grab your spot before it's gone! www.amnat2027.org
amnat2027.org
ASN Stand Alone Meeting 2027
Jan 8-12 - Long Island, NY. Learn more about the conference and register here!
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Chris Martine | Plant People FTW @martinebotany.bsky.social · 08/10/2026
Fall 2026 Martine Lab, heading into Fall Break. #plantpeopleFTW #raybucknell
Current 8 members of the Martine Lab at Bucknell
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Jhan C. Salazar, PhD @jhancsalazar.bsky.social · 09/10/2026
In our latest manuscript, my coauthors and I wanted to test two ideas: (1) anoles colonized mountains repeatedly and independently, and (2) highland lineages evolve faster than lowland ones. (1/6) doi.org/10.1093/evol...
doi.org
Repeated evolution of high-elevation occupation in tropical lizards
Abstract. Since Darwin and Humboldt, researchers have sought to understand how species adapt to elevation. Although tropical reptiles are typically most di
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Joseph W. BRRRAAAIIINNNSSS @josephwb.bsky.social · 09/10/2026
Apologies to @sidney-davies.bsky.social et al. for my crotchety post last night. _Not_ cool. :/ Paper looks solid.
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LaurierBiology @laurierbiology.bsky.social · 09/10/2026
This afternoon join us for brief research proposal talks by our newest #LaurierBiology Integrative Biology MSc students! All welcome!
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Evolution Letters @evolletters.bsky.social · 09/10/2026
Could bacterial biofilms have something in common with embryos? As disease-causing E. coli grows into a biofilm, it switches on increasingly young genes, following patterns surprisingly similar to those seen in developing organisms. academic.oup.com/evlett/advan...
academic.oup.com
Evolutionary expression patterns in developing biofilms of uropathogenic Escherichia coli reveal embryo-like features
Do bacterial biofilms show developmental evolutionary imprints similar to those of eukaryotic embryos? Using the uropathogenic Escherichia coli UTI89 strai
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Reposted by Joseph W. BRRRAAAIIINNNSSS
Andrew Rambaut (🐏🎀) @arambaut.bsky.social · 09/10/2026
"Temporal and Phylodynamic analyses of the 2026 Bundibugyo virus disease outbreak in the Democratic Republic of the Congo" - www.medrxiv.org/content/10.6...
medrxiv.org
Temporal and Phylodynamic analyses of the 2026 Bundibugyo virus disease outbreak in the Democratic Republic of the Congo
The Democratic Republic of the Congo is experiencing a major outbreak of Ebola disease caused by Orthoebolavirus bundibugyoense (Bundibugyo virus), which was declared on May 15, 2026. To investigate t...
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Jacqueline Antonovich @jackiantonovich.bsky.social · 09/10/2026
Academia distilled.
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Ari Pekka Mähönen @apmahonen.bsky.social · 09/10/2026
Tenure track assistant/associate professor positions open in my university. Within life sciences, INCLUDING PLANT SCIENCES. Please RT jobs.helsinki.fi/job/Helsinki...
jobs.helsinki.fi
Three tenure track assistant/associate professors in life science, HiLIFE
Three tenure track assistant/associate professors in life science, HiLIFE
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J Pardo @jdpardo.bsky.social · 09/10/2026
I'm definitely observing this. A lot of my friendships from university began as study groups. Now students just study with notebookLM or another chatbot. These students will come out of university more socially isolated, less open-minded, and lacking critical communication and collaboration skills.
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New Phytologist @newphyt.bsky.social · 31/08/2026
Selection shapes the evolution of genome size in a globally invasive plant Nongthongbam et al. @byonkeshn.bsky.social @johnstinchcombe.bsky.social nph.onlinelibrary.wiley.com/doi/10.1111/...
Abundance, genomic distribution and structural characteristics of transposable elements and ribosomal RNA genes across the common ragweed (Ambrosia artemisiifolia) reference genome.
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Sidney Davies @sidney-davies.bsky.social · 07/10/2026
Our new paper is out! We find that different molecular clock methods recover distinct evolutionary timescales. royalsocietypublishing.org/rspb/article...
royalsocietypublishing.org
Competing methods of divergence time estimation recover diverse evolutionary timescales
Abstract. Molecular clocks convert evolutionary distances into geological times to infer time-scaled phylogenies. Methods differ in terms of fossil calibra
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Seema Sheth @seemasheth.bsky.social · 09/10/2026
It's official: no more Phrymaceae, monkeyflowers are now in Orobanchaceae!
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Chris Moore @mutualismecology.bsky.social · 08/10/2026
After 55 days on crutches I can finally “walk” and teach using the board 😭 I really missed it: slides are not the same!!!
A whiteboard filled with red, black, and green math equations and graphs. Before today I had to resort to showing material on slides because it was too burdensome to do whiteboard work on crutches.
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Karl Magnacca @kmagnacca.bsky.social · 08/10/2026
Evopsych guy: “Am I out of touch with the genetics? No, it’s the geneticists who are woke left ideologues.”
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Dan Warren @danlwarren.bsky.social · 08/10/2026
Reading Statistical Rethinking by @rmcelreath.bsky.social and “If you are confused, it is only because you are trying to understand” is such a great line that I am definitely going to have to quote it when I’m teaching.
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Joseph W. BRRRAAAIIINNNSSS @josephwb.bsky.social · 08/10/2026
Heerdunter
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Pravrutha Raman @pravrutharaman.bsky.social · 08/10/2026
Now that we have moved coasts, I am thrilled to share that the ChromEvo (Raman) lab is officially open at UMass Boston 🎉 We ask how CHROMatin EVOlution leads to functional innovation and we are hiring at multiple levels. Read on and share with folks who maybe interested chromevoramanlab.github.io
The logo with a phylogenetic tree, a budding yeast, a fly and a nucleosome that has Raman lab Chrom Evo written in the middle
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Journal of Systematics and Evolution @journalsysevo.bsky.social · 08/10/2026
APG V, the 5th community-based classification of flowering #plants, is now available! This revision of the APG #classification marks a shift from mainly #plastid-based classification to nuclear-#genome-informed #systematics. 🆓 doi.org/10.1111/jse.... @wileyecology.bsky.social
doi.org
Large‐scale nuclear and plastid phylogenomic analyses inform an updated Angiosperm Phylogeny Group classification: APG V
This revision of the APG classification considers the extensive recent analyses of hundreds of nuclear and plastid genes for many angiosperm species. Although previous versions of the APG classificat...
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Débora Y C Brandt @deboraycb.bsky.social · 08/10/2026
Now that it's officially out, I have to say I'm quite proud of this work🙂 I got involved in it after a bit of a failure in another proj. Took way longer than it could. Started pregnant, published close to baby's 3rd bday😅 Very grateful for my patient mentors and collaborators doi.org/10.1093/molb...
academic.oup.com
Characterizing the detectable and invisible fractions of genomic loci under balancing selection
Abstract. Balancing selection refers to scenarios where selection maintains genetic polymorphisms affecting fitness and its components. Empirical studies h
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Kathryn R Elmer @profkathrynelmer.bsky.social · 08/10/2026
we have a PhD studentship open in the NorthWestBio Doctoral Training Programme. This is a "CASE" Studentship, meaning it is academics together with a charity partner and involves an internship. Currently open for international applicants; home UK applicants from 2 Nov. www.gla.ac.uk/postgraduate...
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Joseph W. BRRRAAAIIINNNSSS @josephwb.bsky.social · 08/10/2026
I can spot a incorrectly-rotating globe or a left-handed helix from 500 yards :P
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Pookleblinky @pookleblinky.bsky.social · 08/10/2026
Douglas Adams's 1987 Dirk Gently's Holistic Detective Agency featured robot monks to which people had outsourced their faith and philosophy and ethics.
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Joseph W. BRRRAAAIIINNNSSS @josephwb.bsky.social · 08/10/2026
Looks great; love the watercolour aesthetic. Only nitpick: at 5:05 the Earth is rotating in the wrong direction :/
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Will Ratcliff @wcratcliff.bsky.social · 07/10/2026
Out today in @nature.com: our review on how single cells evolve into multicellular organisms. With Ozan Bozdag, @kaitong25.bsky.social, Peter Yunker, and @matthewherron.bsky.social. rdcu.be/9ZuiKow9twKa For an overview, check out the video below.
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Brian O'Meara @omearabrian.bsky.social · 08/10/2026
Laura Russo and I have a chapter on "The coevolution of flowering plants and pollinators" in this new book on "Threats to Pollinator Abundance and Diversity" www.sciencedirect.com/book/edited-... 🐝🌸🦋🌺
sciencedirect.com
Threats to Pollinator Abundance and Diversity
Threats to Pollinator Abundance and Diversity, the first release in the Pollinators in Peril series, covers the latest research on insect...
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Gal Ofir @galofir.bsky.social · 08/10/2026
A new plant-bacteria immunological connection in the first preprint of our group at @mpi-bio-fml.bsky.social @plantevolution.bsky.social! Straight from the top of Mt. Olympus ⛰️🦅 Led by Eirik @eiriklag.bsky.social, in collaboration with @geminiteamlab.bsky.social www.biorxiv.org/content/10.6...
Our preprint with the view from the top of the Olympus in the background
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Shelly Gaynor @shellygaynor.bsky.social · 07/10/2026
Recruiting students to your Ecology and Evolutionary Biology PhD program? Make sure your stipend information is up-to-date in the Biology PhD Stipend database: mlgaynor.com/BiologyPhDSt...
mlgaynor.com
Biology PhD Stipends
Biology Ph.D. stipend database with live summaries from the shared Google Sheet.
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Dan Mennill @dmennill.bsky.social · 07/10/2026
Congratulations to Nelsy Niño! She has just received a Best Student Presentation Award from the Society of Canadian Ornithologists for her talk "Vocal mimicry is widespread in tropical seedeaters" at the SCO 2026 Annual Meeting. Way to go Nelsy! @ibiouwindsor.bsky.social @nelsyninor.bsky.social
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