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Denis Jabaudon

@djabaudon.bsky.social
1.1K followers 282 following 69 posts

Developmental neurobiologist, neurologist, & evo-devo aficionado. University of Geneva, Switzerland.

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Reposted by Denis Jabaudon
Sergi Roig Puiggros @sroig.bsky.social · 12/01/2026
Relating to our recently published paper in @natneuro.nature.com! 🔥🚨 Find here a research briefing that we wrote w/ @djabaudon.bsky.social trying to reach a broader neuroscience audience! Enjoy the reading! www.nature.com/articles/s41...
nature.com
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Denis Jabaudon @djabaudon.bsky.social · 05/10/2025
Interested in the mechanisms of neurogenesis, and how they might converge/differ across species, regions, and life epochs? Check this out, wonderful location and great science! Please RT neuro-unige.ch/news/csf-mee...
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Denis Jabaudon @djabaudon.bsky.social · 19/09/2025
Ever wondered how robust cellular identity is to external perturbations? Here we disrupt cellular environmnent in vivo and in vitro, and find cell population specific sensitivities. Environment sculpts development yes, but not all cells are made of the same wood. www.science.org/doi/10.1126/...
science.org
Cell-extrinsic controls over neocortical neuron fate and diversity
Cell-extrinsic cues are key for neocortical cell identity and diversity.
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Denis Jabaudon @djabaudon.bsky.social · 07/06/2025
"You cannot not communicate". Paul Watzlawick. Highlights that all human interactions, even silence, are forms of communication and convey a message. Everything we do —or don't do — can be interpreted as communication by others. E.g. ghosting. There's no way out of being social.
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Denis Jabaudon @djabaudon.bsky.social · 04/06/2025
Dear Reviewer #2, thank you for accepting to assess our revisions. After 60 days, the editor gave up, you never answered. The 1st author worked day & night to address your points, but you were too busy to even say no. The outcome is irrelevant, his disillusion isn't. Review responsibly, it matters.
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Joris de Wit @synapse-lab.bsky.social · 08/04/2025
Postdoc opportunity in the heart of Europe! Check out the flyer below. Join our team on an international project with Anthony Holtmaat exploring synaptic plasticity and specificity in cortical and thalamocortical circuits.
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Cedric Boeckx @cedricboeckx.bsky.social · 28/05/2025
Brilliant @natneuro.nature.com by @scienceyael.bsky.social @lehtinenlab.bsky.social, uncovering “a fundamental secretory pathway in the Choroid Plexus that shapes brain development” in mice 🧪🧠 www.nature.com/articles/s41...
nature.com
Choroid plexus apocrine secretion shapes CSF proteome during mouse brain development - Nature Neuroscience
The choroid plexus (ChP) provides molecular cues for brain development. However, the underlying mechanisms are unclear. This study identifies an apocrine secretion mechanism in the ChP that modulates ...
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Denis Jabaudon @djabaudon.bsky.social · 28/05/2025
Still openings, check it out!
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Chloë R McKenzie @chloermckenzie.bsky.social · 21/05/2025
Success in academia often has more to do with luck, patronage and the job market than “hard work”. Good academics acknowledge this. I worked hard, but I was in the right place at the right time on occasion. Historians far more talented than I have fallen between the cracks.
Illustration showing a graduation ceremony, with speaker addressing graduates: “Let the example of my fluke success guide nearly all of you to crushing disappointment”.
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Seán Froudist-Walsh @seanfw.bsky.social · 18/05/2025
"One day, when it's safe, when there's no personal downside to calling a thing what it is, when it's too late to hold anyone accountable, everyone will have always been against this." - Omar El Akkad
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Esther Klingler @estherkli.bsky.social · 30/04/2025
🎉 Excited to share that our paper on FCDII is out today! 🙌🏻 Huge thanks to @sbaulac.bsky.social and @sara baldassari for bringing me on board and introducing me to the complexity of somatic mutations. Hope our work helps advance understanding of the disease mechanisms.
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Denis Jabaudon @djabaudon.bsky.social · 05/05/2025
Why does the forebrain expand dramatically while other neural regions grow less? Our new publication reveals progenitor metabolism critically shapes region-specific brain growth. Thread below. authors.elsevier.com/a/1k-udL7PXu...
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Denis Jabaudon @djabaudon.bsky.social · 25/03/2025
😯 doi.org/10.1101/2025...
biorxiv.org
Shared Neural Codes for Emotion Recognition in Emoji and Human Faces
Facial expressions are critical social signals, essential for human communication. This study used EEG to investigate the neural dynamics of the processing of emotional expressions in real and emoji faces, using a data-driven approach. Across two experiments with identical paradigms, two separate sets of participants viewed facial expressions (happy, angry, sad, neutral) in real faces (4 female and 4 male identities, n = 24) or emojis (6 platforms, n = 25) while performing a two-alternative forced-choice emotion recognition task. Time-resolved multivariate classification and spatio-temporal searchlight analyses revealed robust decoding of emotional expressions within and across experiments. Consistent effects emerged early and peaked between 145-160 ms over posterior-occipital and parietal regions. Notably, robust cross-classification between real and emoji faces demonstrated that face-like emoji stimuli evoke neural responses comparable to those elicited by real faces, with more sustained effects over right posterior sites. These findings suggest that the brain uses overlapping spatio-temporal codes for naturalistic and symbolic facial expressions, providing new insights into the neural coding of social signals and the representational overlap between natural and artificial emotional expressions. ### Competing Interest Statement The authors have declared no competing interest.
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Denis Jabaudon @djabaudon.bsky.social · 07/03/2025
#Standupforscience event today at Campus Biotech in Geneva. In solidarity for our colleagues in the US and in support of universal values of science: transparency, evidence, cooperation, and intellectual honesty.
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Denis Jabaudon @djabaudon.bsky.social · 05/03/2025
Open positions in human developmental neuroscience, check it out!
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Denis Jabaudon @djabaudon.bsky.social · 05/03/2025
Open positions in neuroimmunology in Paris, check it out!
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
Atypical functional connectome in congenitally blind humans doi.org/10.1101/2025...
doi.org
Atypical functional connectome in congenitally blind humans
The cortex is organized along macroscale structural and functional gradients that extend from unimodal to transmodal association areas and from somatosensory to visual regions. It has not been tested ...
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
Interesting study on cell-type-specific aging using single-nuclei transcriptomics in the human neocortex. Not clear to me based on this graph that pace of aging is striking different across cell types. doi.org/10.1101/2025... see also doi.org:10.1038/s41593-024-01742-z
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
Novel environment exposure drives temporally defined and region-specific chromatin accessibility and gene expression changes in the hippocampus. doi.org/10.1101/2024...
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
A bit of a spooky title, but nice ressource for longitudinal imaging of brain connectivity throughout life. Functional Hierarchy of the Human Neocortex from Cradle to Grave doi.org/10.1101/2024...
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
Long-term in vivo imaging of single neurons in the developing mouse brain from early postnatal days on. A game-changer in figuring out developmental trajectories. From the Cossart lab. doi.org/10.1101/2025...
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
In drosophila, by manipulating sets of surface proteins, you can re-engineer connectivity of olfactory neurons and generate a new neuron type that alters courtship behavior. Impressive work from the Luo lab. doi.org/10.1101/2025...
doi.org
Rewiring an olfactory circuit by altering the combinatorial code of cell-surface proteins
Proper brain function requires the precise assembly of neural circuits during development. Despite the identification of many cell-surface proteins (CSPs) that help guide axons to their targets, it re...
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Denis Jabaudon @djabaudon.bsky.social · 03/03/2025
US stimulation (i.e. disruption) of specific thalamic nuclei in healthy humans affects arousal like behavior (central thal) and visual attention (pulvinar). doi.org/10.1101/2025...
doi.org
Transcranial ultrasonic stimulation of central thalamus reduces arousal in healthy volunteers
We present the first causal evidence in healthy humans linking central thalamus to vigilance and pulvinar to visuospatial attention using low-intensity transcranial focused ultrasound stimulation (tFU...
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Reposted by Denis Jabaudon
Antoine de Chevigny @antoinedechevigny.bsky.social · 27/02/2025
Delighted to showcase our atlas for the inference of ligand-receptor mediated interactions between neuronal subtypes during mouse cortex development. Herculean endeavor by former PhD student Rémi Mathieu (now @alleninstitute.bsky.social) and team, in collaboration with @LudovicTelley Thread 🧵
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Arc Institute @arcinstitute.org · 25/02/2025
Today, we're launching the Arc Virtual Cell Atlas, a growing resource for computation-ready single-cell measurements. arc-website-git-ben-virtual-cell-atlas-tool-arc-institute.vercel.app/news/news/ar...
arc-website-git-ben-virtual-cell-atlas-tool-arc-institute.vercel.app
Arc Virtual Cell Atlas launches, combining data from over 300 million cells | Arc Institute
Arc Institute today launched the Arc Virtual Cell Atlas, a growing resource for computation-ready single-cell measurements, starting with data from over 300 million cells. The initial release of the A...
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Denis Jabaudon @djabaudon.bsky.social · 26/02/2025
There are no ASD or ALS genes. Just like there are no ASD or ALS patients. There are genes associated with these diseases, and people with them. It's beyond semantics; it's about pleiotropy (genes) & individuality (patients). Denying complexity doesn't make a problem simpler to solve (tell POTUS).
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Denis Jabaudon @djabaudon.bsky.social · 25/02/2025
Interesting review on the acquisition of motor skills through (1) innate (2) opportunity-based and (3) systematic tuning processes. The framework is compelling although (2) and (3) may I think be the same process at different time scales. www.nature.com/articles/s41...
nature.com
Three systems of circuit formation: assembly, updating and tuning - Nature Reviews Neuroscience
In this Perspective, Barabási, Ferreira Castro and Engert challenge the notion that learning and plasticity primarily drive the assembly of neural circuits. They present a tripartite framework for how...
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Denis Jabaudon @djabaudon.bsky.social · 24/02/2025
DN-AI www.nature.com/articles/d41...
nature.com
Biggest-ever AI biology model writes DNA on demand
An artificial-intelligence network trained on a vast trove of sequence data is a step towards designing completely new genomes.
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Denis Jabaudon @djabaudon.bsky.social · 20/02/2025
New preprint out from the lab, check out thread below!
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Denis Jabaudon @djabaudon.bsky.social · 14/02/2025
The Zona Incerta is really what its name suggests it is. Contains two distinct GBAergic subtypes of neurons involved in seemingly unrelated behaviors: self-grooming for one, and sleep-to-wake transition for the other. www.biorxiv.org/content/10.1... PS: named by swiss anatomist August Forel 🫕🇨🇭
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Denis Jabaudon @djabaudon.bsky.social · 13/02/2025
Interesting: following hemispherotomy – this is typically performed for severe intractable epilepsies, where one hemisphere is fully disconnected but left in place – there remains "islands of awareness" although most activity is sleep-like. www.biorxiv.org/content/10.1...
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Denis Jabaudon @djabaudon.bsky.social · 13/02/2025
This is cool: three blind raters were asked to guess, based solely on anonymized dream reports, which audiobook someone had listened to before experiencing a dream. Turns out they were quite good at it. Beyond the researchers' own wildest dreams I guess... www.biorxiv.org/content/10.1...
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Denis Jabaudon @djabaudon.bsky.social · 13/02/2025
"Eye blinks synchronize with musical beats during music listening" www.biorxiv.org/content/10.1... Damn, can't help but think about what the DOGE would think of this... Interesting effect though; could be useful for group pics.
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Reposted by Denis Jabaudon
Borrell Lab @borrell-lab.bsky.social · 11/02/2025
Registration for ECCN 2025 in Alicante is now open. Do not miss!!! eccn2025.umh.es @neuroalc.bsky.social @umh.es @csic.es @eurnetbrainevor.bsky.social
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Denis Jabaudon @djabaudon.bsky.social · 11/02/2025
Surmounting the ceiling effect: exposing expert pianists to fast and complex finger movements that cannot be performed voluntarily allows them to then improve. Transferable from one hand to the other. I think that's what ChatGPT does to us too. www.science.org/doi/10.1126/...
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Denis Jabaudon @djabaudon.bsky.social · 11/02/2025
Why do people still use the term "Malformations of Cortical Development" (MCD)? A malformation is a developmental process, there is no need for redundancy; development cannot be malformed. "Cortical Malformations" (CM) alone does the job. Just like the gulf of Mexico is the gulf of Mexico.
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Reposted by Denis Jabaudon
Gord Fishell @gordfishell.bsky.social · 10/02/2025
HI Everyone! Cortical Development just moved over to Bluesky. Come to this years meeting in Naxos Sicily May 25th-28th. Come join the fun and science!
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Denis Jabaudon @djabaudon.bsky.social · 02/02/2025
🧠Job Opening!🧠 We are opening 2️⃣! positions – bioinformatics / molecular biology – in a project studying how temporal patterns set up connectivity in human brain tissue. @institutimagine.bsky.social. Full details below, contact me for details if interested. And please retweet (re-bluesky?)!
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Dorsa Amir @dorsaamir.bsky.social · 25/01/2025
Does the culture you grow up in shape the way you see the world? In a new Psych Review paper, @chazfirestone.bsky.social & I tackle this centuries-old question using the Müller-Lyer illusion as a case study. Come think through one of history's mysteries with us🧵(1/13):
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Pierre Vanderhaeghen @vanderhaeghenp2.bsky.social · 27/01/2025
Join us this coming May 6-9 in Paris for the second EMBO Meeting on developmental timing across species. Registration now OPEN. Stellar line-up of inv. speakers + talks selected from abstracts. meetings.embo.org/event/25-dev... @trayon.bsky.social @bassemh.bsky.social @mdiazcuadros.bsky.social
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Denis Jabaudon @djabaudon.bsky.social · 27/01/2025
What is the probability of drinking the same molecule of H20 twice in a lifetime? Asked Claude.ai to do the math; checked it roughly and turns out it's highly likely.
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Denis Jabaudon @djabaudon.bsky.social · 27/01/2025
Ants are compared with humans in this intriguing paper. Groups from each specie must carry a load across a maze. @wiringthebrain.bsky.social, is there agency here? Humans received instructions, ants bring device to nest. www.pnas.org/doi/10.1073/... www.youtube.com/watch?v=yyT4...
youtube.com
Ants making a smart maneuver
YouTube video by MAHABHARATH
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Reposted by Denis Jabaudon
Miki Ebisuya @ebisuyamiki.bsky.social · 24/01/2025
Latest from the lab! I've been seeking the ultimate modulator that regulates the tempo of multiple developmental processes simultaneously, and metabolism has been an attractive candidate for such a global tempo modulator. However, I was wrong. 1/ www.nature.com/articles/s41...
nature.com
Metabolic activities are selective modulators for individual segmentation clock processes - Nature Communications
Metabolism has been considered an attractive candidate as a global modulator of the tempo of multiple developmental processes, including somite segmentation timing. Here they demonstrate that metaboli...
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Erik Hoffner @erikhoffner.bsky.social · 24/01/2025
Has Bluesky replaced X for scientists? 🧪 Nature's poll says it's become popular w/ researchers in the wake of the massive & negative changes @ Xitter 70% of the 6,000 respondents made the switch, declaring that @bsky.app was nicer, kinder & less antagonistic to scientists Full results:
nature.com
Bluesky’s science takeover: 70% of Nature poll respondents use platform
Roughly 6,000 readers answered our poll, with many declaring that Bluesky was nicer, kinder and less antagonistic to science than X.
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Denis Jabaudon @djabaudon.bsky.social · 24/01/2025
Intriguing finding on how alpha synuclein could spread across cortices. Not interhemispheric no, from kidney to brain...
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Denis Jabaudon @djabaudon.bsky.social · 24/01/2025
1:43 minutes on the (scientific) beauty of a flower. 100% Feynman, a delight. youtu.be/ZbFM3rn4ldo?...
youtu.be
Richard Feynman: The Beauty of the Flower
YouTube video by FreeScienceLectures
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Cedric Boeckx @cedricboeckx.bsky.social · 22/01/2025
New preprint 📣! Excited to share the result of several years of work, led by @ellylewerissa.bsky.social & @olivieroleonardi.bsky.social, in collaboration with friends @naelnadifkasri-lab.bsky.social & Giuseppe Testa. On CHD2, a chromatin remodeller, its role in evolution & development [🧵] 🧪🧠🧫🧬
Day 50 cortical organoid stained for KI67 (red), MAP2 (magenta), Hoechst (cyan); image credit: Oliviero LeonardiDIV 28 iNeuron. Homer1 in green and Synapsin1 in purple showing co-localization of post- and pre-synapses, respectively; image credit: Elly Lewerissa
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Max Planck Institute for Brain Research @mpibrain.bsky.social · 21/01/2025
Congratulations to @mpibrain.bsky.social director Gilles Laurent for being awarded the 2025 Louis-Jeantet prize for Medicine! The @louisjeantetfdn.bsky.social recognizes Laurent's pioneering work on the operations of #neurons and dynamics of neuronal networks. More infos 👉 bit.ly/4hqk6ie
brain.mpg.de
Gilles Laurent is awarded the Louis-Jeantet Prize for Medicine in 2025
The 2025 Louis-Jeantet Prizes are awarded to Gilles Laurent, director at the Max Planck Institute for Brain Research in Frankfurt and to Veit Hornung, professor at the Ludwig Maximilian University of ...
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Denis Jabaudon @djabaudon.bsky.social · 21/01/2025
If you find microglia genes in your neuronal patch-seq datasets have no fear, it's been reported before and can be computationally cleaned out. www.cell.com/iscience/ful...
cell.com
Investigating microglia-neuron crosstalk by characterizing microglial contamination in human and mouse patch-seq datasets
Cellular neuroscience; Techniques in neuroscience; Transcriptomics
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Denis Jabaudon @djabaudon.bsky.social · 21/01/2025
How strong is the evidence that neuron numbers decrease with age in humans? Had a hard time finding something reliable.
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