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Arianne Babina

@ariannebabina.bsky.social
280 followers 337 following 20 posts

Lecturer/Assist. Prof. in Bacteriology @ University of Glasgow | bacterial gene regulatory network evolution |✌️❤️ RNA | she/her

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Reposted by Arianne Babina
Mar Albà lab @maralbalab.bsky.social · 04/10/2026
We are recruiting!! EU-funded PhD position to study the evolution of small proteins - from noise to function Apply before Oct 22 albagroup.researchmar.net/positions www.orfeus-dn.eu @grib-barcelona.bsky.social @prbb.org @researchmar.bsky.social @official-smbe.bsky.social @sciencehr.bsky.social
albagroup.researchmar.net
Mar Albà 's evolutionary genomics LAB: Open Positions
work with us at the evolutionary genomics lab
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Rachel M. Wheatley @rachelmwheatley.bsky.social · 02/10/2026
🔊 Fully-funded 4 year PhD: How does the microbiome evolve under repeated pathogen exposure? 🦠 Project looking at how commensal microbes resist pathogen invasion, impact of antibiotics on these outcomes, and selective pressures in the microbiome. Come join us at QUB! www.gla.ac.uk/postgraduate...
gla.ac.uk
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Jörg Stülke @joergstuelke.bsky.social · 26/09/2026
Identification of a novel RNA-modifying enzyme! RlmS! #SubtiWiki www.pnas.org/doi/10.1073/...
pnas.org
Activity-based profiling of bacterial RNA-modifying enzymes reveals species-specific 5-methyluridine modification in Bacillus subtilis 23S rRNA | PNAS
RNA modifications play an important role in biological processes. Mapping the diversity of RNA chemistry and studying the biological function of in...
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Kate Baker @ksbakes.bsky.social · 25/09/2026
We have an open Assistant/Associate Professor position in Pathogen Biology at the Department of Genetics - come and join us! 🦠 🧫 🧬https://www.cam.ac.uk/jobs/assistantassociate-professor-in-pathogen-genetics-pc51175
cam.ac.uk
Assistant/Associate Professor in Pathogen Genetics
Applications are invited for an Assistant or Associate Professorship in Pathogen Genetics to be held in the Department of Genetics. We are searching for a talented individual with a track record of fu...
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Jason Stajich @hyphaltip.bsky.social · 25/09/2026
Virginia Tech has TWO Assistant/Associate Professor positions open in the Department of Biological Sciences targeting fungal and bacterial molecular biologists. Join some great fungal biologists @mycorican.bsky.social and Kirsten Nielsen! jobs.apply.vt.edu/jobs/assista...
jobs.apply.vt.edu
Assistant/Associate Professor - Blacksburg, Virginia, United States
Job Description The Department of Biological Sciences in the College of Science at Virginia Tech seeks applicants for two (2) tenure-track research and teaching positions at the Assistant/Associate ...
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Thomas Ipoutcha @tomipou.bsky.social · 16/09/2026
Finally out! 🎉 After 3 years of postdoc in London, here is my main work, now published in Nature Comm. (and as co-corresponding author!) Using a combination of bioinformatic and experimental approaches, we propose a model of plasmid evolution in Staphylococcus. www.nature.com/articles/s41... ⬇️ 1/4
nature.com
Mobile genetic elements drive a plasmid fusion and deletion lifecycle shaping evolution and antimicrobial resistance - Nature Communications
Plasmids drive bacterial adaptation, but how their diversity arises has remained unclear. Here, they show that in Staphylococcus aureus, mobile genetic elements repeatedly fuse and delete plasmids, re...
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Trends in Cell Biology @cp-trendscellbio.bsky.social · 09/09/2026
RNA dysregulation as a determinant of aging and neurodegenerative vulnerability
dlvr.it
RNA dysregulation as a determinant of aging and neurodegenerative vulnerability
In the nervous system, aging causes deterioration of cellular and molecular processes that are associated with declines in cognition, sensory perception, and motor coordination. Aging is also the strongest risk factor for neurodegenerative disease, yet the mechanisms by which aging predisposes neurons to dysfunction remain incompletely understood. While genomic instability, proteostasis decline, mitochondrial dysfunction, and chronic inflammation have dominated prevailing models, recent evidence highlights RNA dysregulation as a central component of age-associated decline. In this review, we summarize recent findings suggesting that aging progressively erodes RNA regulatory fidelity through alterations in RNA-binding protein abundance, localization, biophysical behavior, and RNA interactions. We argue that age-dependent RNA dysregulation represents an important mechanism that converges with genetic risk to drive neuronal vulnerability and neurodegeneration.
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Kresten Lindorff-Larsen @lindorfflarsen.bsky.social · 04/09/2026
EMBO Practical Course Integrative modelling of biomolecular interactions 26 – 30 April 2027 | Athens, Greece Great speakers/teachers (and organizers 😊) Registration Deadline: 8 November 2026 meetings.embo.org/event/27-bio...
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Hiten Madhani @hitenmadhani.bsky.social · 27/08/2026
Most basic science departments at UCSF are having faculty searches this year. Biochemistry & Biophysics, Microbiology & Immunology, Cellular and Molecular Pharmacology, Physiology and more. We're looking for new and exciting science and nice people. You'll find them all at aprecruit.ucsf.edu
aprecruit.ucsf.edu
Welcome - AP Recruit
University of California, San Francisco Online Faculty Recruitment
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Luke Remage-Healey @healeylab.bsky.social · 25/08/2026
Come be our colleague!!! TT position in Evolution careers.umass.edu/jobs/assista...
careers.umass.edu
Assistant Professor - Evolutionary Biology - Amherst, Massachusetts, United States
Title: Assistant Professor - Evolutionary Biology Executive Area: Academic Affairs College/School/MBU: College of Natural Sciences Department: Biology Work Location: Amherst Schedule: Full Time Work A...
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Corrie Moreau @corriemoreau.bsky.social · 23/08/2026
📣 📣 📣 UPDATE: The 2026-2027 list of faculty and postdoc positions in ecology and evolutionary biology is out! Be sure to check out this active and helpful community run resource! docs.google.com/spreadsheets...
docs.google.com
ecoevojobs.net 2026-27
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Rita Tamayo @ritatamayo.bsky.social · 13/08/2026
New from the lab--C. diff uses phase variation to initiate infection in a virulent state but that phenotype presents a fitness cost as disease develops. A programmed reset mechanism primes Clostridioides difficile virulence at the onset of infection | Science Advances www.science.org/doi/10.1126/...
science.org
A programmed reset mechanism primes Clostridioides difficile virulence at the onset of infection
Clostridioides difficile is a major cause of antibiotic-associated diarrhea. This pathogen produces toxins essential for disease and flagella that promote intestinal colonization. Flagella and toxins ...
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 13/08/2026
A small RNA guides a post-transcriptional regulatory protein to its target www.biorxiv.org/content/10.64898/20…
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 13/08/2026
Plasmid biology is compressed in host chromosomal architecture www.biorxiv.org/content/10.64898/20…
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 13/08/2026
A microproteome screen identifies immunomodulatory bacterial microproteins encoded in expanded gene arrays in Leptotrichia www.biorxiv.org/content/10.64898/20…
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Ajai Dandekar @ajaidandekar.bsky.social · 13/08/2026
Lab preprint! Zichu Yang, Anvita Billa, and Adi Desai systematically studied the DNA-binding domain of the quorum sensing transcription factor LasR. A collaboration with Matt Parsek
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Edoardo Gianni @edogia.bsky.social · 13/02/2026
How could a simple self-replicating system emerge at the origins of life? RNA polymerase ribozymes can replicate RNA, but existing ones are so large that their self-replication seems impossible. Could they be smaller? Excited to share our latest work in @science.org on a new small polymerase. 1/n
science.org
A small polymerase ribozyme that can synthesize itself and its complementary strand
The emergence of a chemical system capable of self-replication and evolution is a critical event in the origin of life. RNA polymerase ribozymes can replicate RNA, but their large size and structural ...
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Noah Whiteman @nkwhiteman.bsky.social · 06/08/2026
I’m thrilled to share that our search for a tenure-track colleague in my *truly wonderful and collegial* Genetics, Genomics, Evolution and Development Division in the MCB Department at Berkeley @berkeleymcb.bsky.social is live! Please share this broad search widely: aprecruit.berkeley.edu/JPF05481
aprecruit.berkeley.edu
Assistant Professor -Genetics, Genomics, Evolution, and Development - Molecular and Cell Biology
University of California, Berkeley is hiring. Apply now!
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Ronald Breaker @ronbreaker.bsky.social · 24/07/2026
My lab at #Yale has two #riboswitch research openings: 1. Postdoc with mammalian gene manipulation experience (tinyurl.com/zzb269em); 2. Postdoc (or BS, MS) with bioinformatics skills (tinyurl.com/3j73jfcn). Send your cv to me or to Kavita at kumari.thakur@yale.edu.
tinyurl.com
Postdoctoral Associate in Eukaryotic Cellular Molecular Genetics and RNA Biology — Department of Molecular, Cellular and Developmental Biology (MCDB)
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Teresa O'Meara @teresaomeara.bsky.social · 29/07/2026
Bacteriology-Focused Assistant Professor Position in Microbiology and Immunology at the University of Michigan Application deadline: August 15, 2026 Come be my colleague!
Bacteriology-Focused Assistant Professor Position in Microbiology and Immunology at the University of Michigan

Application deadline: August 15, 2026

Applicants are requested to send
1) A cover letter (up to 1 page)
2) A CV
3) A description of research interests and goals (up to 2 pages)
4) A description of teaching experience and philosophy (up to 1 page)
5) Contact information including email to solicit 3 letters of recommendation.
Application materials should be combined into one PDF and addressed to the department chair, Dr. Bethany Moore, and sent via email to Sheryl Smith - sherylhs@umich.edu
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Danny IncaRNAto @incarnatolab.bsky.social · 13/06/2026
Today I am so incredibly excited to share with you a new tool from the lab, #RFviewJS (and its stand-alone version #RFview). Two tools I built to fill a gap that has frustrated me for years. #RNA secondary structure visualization (1/n)
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Craig MacLean @craigmaclean.bsky.social · 06/07/2026
New Essay: 'Resistance potentiators: Evolutionary catalysts of antibiotic resistance' To understand the evolutionary drivers of #AMR we need to move beyond resistance genes to thinking about the ability of genomes to generate AMR variants. #microsky journals.plos.org/plosbiology/...
journals.plos.org
Resistance potentiators: Evolutionary catalysts of antibiotic resistance
How do bacteria evolve resistance to antibiotics? Drawing on evidence from experimental evolution, pathogen genomics, and molecular microbiology, this Essay argues that the evolution of antibiotic res...
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Osterman Ilya @ostermanilya.bsky.social · 13/07/2026
🚨 We're hiring! My new lab at EMBL Hamburg is looking for a Research Technician. I'm looking for someone excited by phages, metabolism, enzymes, structural biology and bacterial immunity—if you know the right person, please share this post!🧵⬇️ Apply here: embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
embl.wd103.myworkdayjobs.com
Research Technician (Osterman Group – Metabolism-driven immunity)
EMBL Hamburg / CSSB The European Molecular Biology Laboratory (EMBL) is Europe’s flagship life sciences organization, with more than 110 independent research groups across Heidelberg, Hamburg, Grenobl...
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Christopher Frøhlich @cfr016.bsky.social · 12/07/2026
🧬 I'm looking for a Researcher (2 years) in Molecular Biology and Antimicrobial Resistance at UiT The ❄️Arctic University of Norway (Tromsø). 🔬 If you have experience building and screening enzyme libraries and characterising the variants that come out, get in touch.
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Society for Molecular Biology and Evolution @official-smbe.bsky.social · 08/07/2026
🌏 SMBE is calling for proposals for SATELLITE/INTERDISCIPLINARY/REGIONAL SMBE meetings for the period January-December 2027. The deadline for submission of proposals is August 31, 2026. Decisions will be communicated to the applicants by the end of September 2026. #society
Call for proposals

2027SMBE SATELLITE, INTERDISCIPLINARY AND REGIONAL MEETINGS
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PLOS Biology @plosbiology.org · 07/07/2026
How do #bacteria evolve resistance to antibiotics ? This Essay by @craigmaclean.bskyb.social &co argues that the evolution of #AntibioticResistance is catalyzed by ‘resistance potentiators’ that accelerate evolution in a trait-specific manner. 🧪 #AcademicSky @biology.ox.ac.uk plos.io/4flYKnF
Evolutionary trajectories to resistance. Three model graphs relate to hypothetical evolutionary trajectories followed by a sensitive strain (star) under antibiotic pressure. Each arrow shows a hypothetical beneficial mutation and the shaded regions show phenotypes with progressively higher fitness. In panel A, the potentiators in the sensitive strain are intact. Panels B and C show hypothetical evolutionary trajectories when adjuvants block potentiators that accelerate the acquisition of resistance (B) or that amplify antibiotic resistance phenotypes (C). Figure created in BioRender. https://BioRender.com/9ow1603
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Pedro Beltrao @pedrobeltrao.bsky.social · 06/07/2026
My department @eth-dbiol.bsky.social at ETH Zurich is hiring for a tenured professor in mol cell bio and biochemistry (associate/full). The position is within the Institute of Biochemistry (www.bc.biol.ethz.ch) and it is fairly open within their scope of research. www.nature.com/naturecareer...
nature.com
Professor of Molecular Cell Biology and Biochemistry - Zurich, Switzerland job with ETH Zurich | 12861386
The Department of Biology at ETH Zurich invites applications for the above-mentioned tenured professorship at the Institute of Biochemistry
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Zeynep Baharoglu @zeynepbaharoglu.bsky.social · 05/07/2026
Studying the regulons of OmrA and OmrB paralogous small RNAs reveals targets involved in central carbon metabolism and lipogenesis 🦠 www.biorxiv.org/content/10.6... 💫 @egmresearch.bsky.social
biorxiv.org
Studying the regulons of OmrA and OmrB paralogous small RNAs reveals targets involved in central carbon metabolism and lipogenesis
Small regulatory RNAs (sRNAs) are key players in bacterial adaptation to stress. They often occupy central positions in regulatory networks and control the expression of multiple targets. In a strikin...
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Elena Rivas @rivaselenarivas.bsky.social · 05/07/2026
New! R-scape version v2.6.11 github.com/EddyRivasLab... with drawings of R-scape annotated RNA consensus structures with many fewer overlaps!! Using RFview github.com/dincarnato/R... Shout out to @incarnatolab.bsky.social for displaying R-scape's covariation outputs + CaCoFold-R3D structures.
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François-Xavier WEILL @fxweill.bsky.social · 03/07/2026
Can bacterial genomics bring 70 years of epidemiological surveillance back to life? We're hiring a postdoc (2–3 years) to explore the historical evolution of Salmonella Typhi using a unique genomic dataset. More details: euraxess.ec.europa.eu/jobs/449895
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Zeynep Baharoglu @zeynepbaharoglu.bsky.social · 04/07/2026
Increased temperature selects for antibiotic resistance genes in a model aquatic ecosystem #AMR 🦠 www.nature.com/articles/s44...
nature.com
Increased temperature selects for antibiotic resistance genes in a model aquatic ecosystem - npj Antimicrobials and Resistance
npj Antimicrobials and Resistance - Increased temperature selects for antibiotic resistance genes in a model aquatic ecosystem
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Nadia Aubin-Horth @naubinhorth.bsky.social · 30/06/2026
For the #SMBE2026 crowd: Our biology department at Université Laval has a faculty position in Cell Biology, Molecular Biology, or Genetics. Québec City is a wonderful mix of culture and access to nature. Apply before September 4th. universityaffairs.ca/search-jobs/
universityaffairs.ca
Search Jobs - University Affairs
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Paula Navarro @navarropaula.bsky.social · 03/07/2026
🚨 New in @natmicrobiol.nature.com! We reveal how the antibiotic target PBP1b fortifies the E.coli division site against osmotic rupture. Proud this was completed in our independent labs @dmf-unil.bsky.social, with @avettiger.bsky.social. Congratulations to all authors! 🦠❄️🔬 #teamtomo bit.ly/3SCbOg1 👇
doi.org
The penicillin-binding protein PBP1b fortifies the Escherichia coli division site against osmotic rupture - Nature Microbiology
A specific isoform of PBP1b functions independently of the activator protein, LpoB, to drive generation of a wedge-like peptidoglycan structure that strengthens the division site in Escherichia coli.
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Society for Molecular Biology and Evolution @official-smbe.bsky.social · 02/07/2026
Save the date for the 2027 SMBE Conference in Québec City! The LOC of #SMBE2027 would like to welcome you to Québec City for the 2027 Conference of the Society for Molecular Biology and Evolution,from June 20-24, 2027, and hosted by Université Laval at the Québec Convention Centre. #society
Save the Date
SMBE2027
Québec City, Canada
June 20-24, 2027
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Microbiology Society @microbiologysociety.org · 02/07/2026
Are you a UK-based researcher working in microbiology or environmental biotechnology? Researchers at the University of Edinburgh are seeking your views on the natural environment, microbes and microbiomes. Complete their survey by 17 July: microb.io/4y7OWoX
Heathy soil from regenerative agriculture field stock photo ©iStock/Jacob Mathers
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TARGetAMR @target-amr.bsky.social · 26/06/2026
🧬 TARGetAMR’s Prof @ksbakes.bsky.social & @drtessjohnson.bsky.social feature in The Lancet Microbe podcast on AMR National Action Plans & microbial genomics. 🎧 The episode is available via The Lancet Microbe, Spotify, Apple Podcasts, and Amazon Music. 👉 Listen: www.targetamr.org.uk/targetamr-le...
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Seána Duggan @seanaduggan.bsky.social · 26/06/2026
🗞️New Paper🗞️ We show that #Candida & #Staph cooperate via copper handling - with fungal copper uptake & bacterial copper export shaping the community. @mrccmm.bsky.social @microbiologysociety.org @universityofexeter.bsky.social www.microbiologyresearch.org/content/jour...
microbiologyresearch.org
Copper-driven mutualism of Candida albicans and Staphylococcus aureus interkingdom biofilms
Although fungi and bacteria commonly co-exist within polymicrobial communities, the molecular mechanisms underlying their interactions are still not well understood. Here, we show that the fungus Cand...
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Jeff McLean @jeffmclean.bsky.social · 25/06/2026
Consider applying for a faculty position with us at the University of Washington in Seattle. #microbiome Assistant Professor (Tenure Track) position in the Department of Microbiology. Position Posting: apply.interfolio.com/185622 microbiology.washington.edu/uw-microbiol...
apply.interfolio.com
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
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Microbiology Society @microbiologysociety.org · 25/06/2026
External Event Grant Awards are available for eligible members as a contribution towards the costs of attending an event between 1 September to 31 December 2026. Apply before 1 July 2026: microb.io/4uoBAmb
Logo of the Microbiology Society.
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Joe Wade @joe-wade.bsky.social · 24/06/2026
New preprint from our lab, in collaboration with the Santiago/Ruiz-Perez group at UVA. We found a plasmid-encoded DNA-binding protein that preferentially binds its own plasmid! www.biorxiv.org/content/10.6... Thread:
biorxiv.org
A plasmid-encoded H-NS protein selectively binds its own plasmid
H-NS is an abundant nucleoid-associated protein found in Enterobacterales species. Some conjugative plasmids encode H-NS homologues, which are thought to facilitate plasmid maintenance and reduce the ...
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 23/06/2026
Our Dept of Microbiology & Immunology @Geisel School of Medicine @Dartmouth has an opening for an Assistant Professor. Looking for programs bridging multiple areas in Micro & Immuno. A great place to be! Programs: www.M2P2.org www.dartmouthbiofilm.org Job ad: apply.interfolio.com/187637
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Ákos T Kovács @evolvedbiofilm.bsky.social · 20/06/2026
Riboswitch-targeted improvement of lysine production in Bacillus and Priestia species -in NPJ Science of Food from Dennis Nielsen (KU Food) www.nature.com/articles/s41...
nature.com
Riboswitch-targeted improvement of lysine production in Bacillus and Priestia species - npj Science of Food
npj Science of Food - Riboswitch-targeted improvement of lysine production in Bacillus and Priestia species
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Matt Jago @mattjago.bsky.social · 04/06/2026
Our work characterizing how mutational bias is influenced by the local sequence context beyond trinucleotides is out now @pnas.org! We also showed which motifs are most prone to mutations caused by strand misalignment, revealing several new hotspots! 🧬 www.pnas.org/doi/10.1073/...
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John Innes Centre @johninnescentre.bsky.social · 03/10/2025
Shortlisted candidates will be invited to give a seminar at the Fellows Conference, which will be held on 10 March 2026. Candidates who win Fellowships will be offered a Tenure Track Group Leader position from the outset, initially for 5 years. Find out more: www.jic.ac.uk/training-car...
jic.ac.uk
Independent Research Fellowships Leading to Tenured Faculty Positions | John Innes Centre
The John Innes Centre (JIC), is a world leading centre of excellence in plant and microbial sciences based on the Norwich Research Park, UK. We are inviting applications from outstanding researchers…
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Freya Harrison @friendlymicrobe.bsky.social · 15/06/2026
Hey #MicroSky, can anyone tell me offhand whether Klebsiella pneumoniae ATCC13883 has rough or smooth LPS please? My searches are failing. Thank you :)
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Ákos T Kovács @evolvedbiofilm.bsky.social · 14/06/2026
Decoding phage communication: molecular networks, evolutionary dynamics, and therapeutic applications (a review on arbitrium lysis-lysogeny switch in Bacillus phages) NPJ Biofilms and Microbiomes www.nature.com/articles/s41... #PhageSky
nature.com
Decoding phage communication: molecular networks, evolutionary dynamics, and therapeutic applications - npj Biofilms and Microbiomes
npj Biofilms and Microbiomes - Decoding phage communication: molecular networks, evolutionary dynamics, and therapeutic applications
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Alex Merz 🇺🇸🇨🇦🇺🇦 @merz.bsky.social · 11/06/2026
Reminder — UW #Microbiology has an open search for an Assistant Professor, focusing on fundamental problems in #bacteriology! If you or someone you know would be suitable, here's the ad: apply.interfolio.com/185622
Screenshot of the job listing linked in full above
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Ákos T Kovács @evolvedbiofilm.bsky.social · 11/06/2026
MeeY and YybP, two proteins regulated by manganese-sensing riboswitches, are required for Bacillus subtilis biofilm formation NPJ Biofilms and Micerobiome from @johnhelmann.bsky.social www.nature.com/articles/s41...
nature.com
MeeY and YybP, two proteins regulated by manganese-sensing riboswitches, are required for Bacillus subtilis biofilm formation - npj Biofilms and Microbiomes
npj Biofilms and Microbiomes - MeeY and YybP, two proteins regulated by manganese-sensing riboswitches, are required for Bacillus subtilis biofilm formation
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John Helmann @johnhelmann.bsky.social · 09/06/2026
New insights into copper physiology in Bacillus subtilis. The outlines of the pathway for copper import and trafficking to support aerobic growth are emerging. Work led by Grayson Barnes, with support from our collaborators. doi.org/10.1128/mbio... #microsky #metalsinbiology
doi.org
Pathways of copper import and utilization that support respiration in Bacillus subtilis | mBio
Copper is a critical micronutrient for bacteria; however, it is toxic in excess. This leads to the cell having tightly regulated import and export systems to prevent intoxication while having sufficient copper for cellular needs. Copper export has been well studied, but copper import and the effects of copper starvation are less defined. In this article, we characterize the Bacillus subtilis high-affinity copper importer YcnJ. We show that under copper limitation, the cell is deficient in copper-containing oxidases, which leads to respiratory defects. Copper imported by YcnJ is proposed to function in a pathway with other proteins implicated in the assembly of respiratory oxidases. More generally, this work contributes to the underexplored area of copper import and trafficking in bacteria.
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Jon Henninger @jhenninger.bsky.social · 08/06/2026
Excited to share the first pre-print from our lab!! Check it out here! www.biorxiv.org/content/10.6... We found that many RNA-binding proteins canonically understood to regulate RNA processing can also function like transcription factors and cofactors to directly regulate transcription.
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