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Schrader Lab

@schraderlab.bsky.social
466 followers 379 following 12 posts

Schraderlab.org - Enjoying all things related to RNA, RNPs, biomolecular condensates, and bacteriology. IU micro.

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Kristina Jonas @krijonas.bsky.social · 25/09/2026
Really looking forward to this! It’s going to be a great meeting. Please spread the word!
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Schrader Lab @schraderlab.bsky.social · 24/09/2026
My department has a faculty position in "RNA Biology" at the assistant or associate rank. Please share with any RNA biologists on the job market. #RNASky @iubiology.bsky.social
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Maria Hondele @mariahondele.bsky.social · 18/09/2026
The heatwave is finally over - just in time for our “Frosty Foci” to finally come online! ❄️🦠 We found that E. coli builds a transient nucleolus-like ribosome biogenesis compartment during cold adaptation, when RNA (mis)folding makes ribosome biogenesis challenging.
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Tulilab.com @tulilab.bsky.social · 14/09/2026
IU is hiring a virologist. I am so excited. Come join a great group of scientists and people.
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Ákos T Kovács @evolvedbiofilm.bsky.social · 03/09/2026
Flagellar toxicity: Flagellar synthesis is lytic for Bacillus subtilis in the absence of PBP1 PNAS from Dan Kearns lab www.pnas.org/doi/10.1073/... #MicroSky
pnas.org
Flagellar toxicity: Flagellar synthesis is lytic for Bacillus subtilis in the absence of PBP1 | PNAS
Flagella are large transenvelope nanomachines but how they transit the peptidoglycan in gram-positive bacteria is poorly understood. A recent model...
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bioRxivpreprint @biorxivpreprint.bsky.social · 29/08/2026
A Vibrio parahaemolyticus transcriptome map captures conserved and specific regulators www.biorxiv.org/content/10.64898/20…
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 13/08/2026
The intrinsically disordered AR2 domain of RNase E binds mRNA translation initiation regions www.biorxiv.org/content/10.64898/20…
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Schrader Lab @schraderlab.bsky.social · 14/07/2026
New preprint from my lab and Sean Crosson's lab at MSU. We show that BR-bodies in Brucella are linked to regulation of the type IV secretion system and stress tolerance. www.biorxiv.org/content/10.6...
biorxiv.org
BR-bodies link RNA homeostasis to stress tolerance and intracellular fitness in Brucella
Bacterial gene expression depends on the coordinated regulation of RNA synthesis, processing, and decay. The conserved RNA degradosome scaffold, Ribonuclease E (RNase E), assembles into phase-separate...
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Kimberly Kline 🏔 @kimingeneva.bsky.social · 09/07/2026
🚨Join us at the University of Geneva! We're seeking an outstanding junior researcher to apply for an ERC or SNSF Starting Grant with our institutional support in host–pathogen interactions, bacteriology, virology, parasitology, or mycology. www.unige.ch/medecine/mim... Please share!
unige.ch
Open call : MIMOL Junior Group Leader’s application for a Starting Grant - Microbiology and molecular medicine - UNIGE
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Kathrin Fröhlich @microberna.bsky.social · 09/07/2026
The Bacterial RNA Biology Group in Jena is hiring a new PhD student! 🔬🧫🧬 We are looking for a motivated candidate to study bacteriophages of the opportunistic pathogen Klebsiella pneumoniae. 🔥 Apply by July 26, 2026 🔥 Details on the position and application: jobs.uni-jena.de/jobposting/9...
jobs.uni-jena.de
Doctoral Researcher in Molecular Microbiology (m/f/d)
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Alex Bisson @archaeon-alex.bsky.social · 09/07/2026
A call out to our former postdoc John Mallon (not in social media), who contributed to both device development and “biology” :). John evolved a salt-loving archaeon to love salt a bit less (2.6M down to 1.3M!). Cells recovered growth rate AND cell morphology. Congrats Phil, Sebastian, and John!
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IU Biology @iubiology.bsky.social · 07/07/2026
IU biologists uncover a molecular mechanism that helps bacteria spread antibiotic resistance genes. Microbiology graduate student Abby Teipen is lead author of the new study and Biology Professor Ankur Dalia is senior author. Read the article: go.iu.edu/pQ49cJ
This is a photo of graduate student Abby Teipen in the biology lab at Indiana University Bloomington.
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Ákos T Kovács @evolvedbiofilm.bsky.social · 06/06/2026
Flagellar toxicity: flagellar synthesis is lytic for Bacillus subtilis in the absence of PBP1 bioRxiv from Dan Kearns www.biorxiv.org/content/10.6...
biorxiv.org
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Clay Fuqua @fuquaclay.bsky.social · 04/06/2026
See our new latest pre-print for a study led by grad student Ian Reynolds, with current and former undergrads Isabel Westin and Caleb Wood in the lab. A study that goes to show how so many cell surface processes are connected to each other in bacteria. www.biorxiv.org/content/10.6...
biorxiv.org
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Jeremy G Bird @drjeremygbird.bsky.social · 05/06/2026
1/ A new preprint from my lab is out now: “The E. coli DEAD box ATPase, CsdA, is a NAD+ capped RNA binding protein” lead by my graduate student Kaustuv Das with the assistance of @childerslab-pitt.bsky.social -pitt.bsky.social and @schraderlab.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
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Ákos T Kovács @evolvedbiofilm.bsky.social · 19/05/2026
Canonical transcription termination mechanisms explain a minority of operons in cyanobacteria #mSystems fro Gene-Wei Li journals.asm.org/doi/10.1128/...
journals.asm.org
Canonical transcription termination mechanisms explain a minority of operons in cyanobacteria | mSystems
Our understanding of bacterial transcription regulation is largely based on model organisms like Escherichia coli and Bacillus subtilis, yet many of these mechanisms appear absent or divergent in cyanobacteria. These differences limit our fundamental understanding of gene regulation and the applied potential of cyanobacteria in sustainable biomanufacturing. To address this gap, we characterized transcription termination in the model cyanobacterium Synechococcus elongatus PCC 7942. We resolve a longstanding question by showing that intrinsic termination alone cannot account for most termination events in this organism. Pervasive transcript ends lacking intrinsic terminator features and the absence of Rho suggest the existence of novel termination mechanism(s) and highlight a largely unexplored regulatory landscape. Simultaneously, our work expands the repertoire of functionally characterized cyanobacterial intrinsic terminators, offering a new toolkit to fine-tune gene expression using terminators of defined strengths. These findings pave the way for more predictable and powerful applications of cyanobacteria in green biotechnology.
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Tominaga K. (tomiken) @pacyc184.bsky.social · 11/04/2026
Polyphosphate acts as an architectural regulator of carbon fixation and nucleoid structure in cyanobacteria | bioRxiv www.biorxiv.org/content/10.64898/20…
biorxiv.org
Polyphosphate acts as an architectural regulator of carbon fixation and nucleoid structure in cyanobacteria
Polyphosphate (polyP) is a conserved inorganic polymer traditionally viewed as a stress-induced phosphate and energy reserve. In cyanobacteria, however, polyP granules are constitutively present and frequently observed in proximity to carboxysomes, the bacterial microcompartments that mediate CO2 fixation. Here we show that polyP functions as a spatially organized regulator of the photosynthetic cytoplasm in Synechococcus elongatus. PolyP granules localize to the nucleoid and are periodically arranged along the cell axis, independently of the McdAB carboxysome positioning system. Despite this independence, polyP and carboxysomes associate non-randomly, and this association is enhanced when active carboxysome positioning by the McdAB system is disrupted. Loss of polyP synthesis leads to nucleoid expansion, an increased number of smaller carboxysomes with high mobility, and severe defects in growth under ambient CO2. Perturbation of polyP turnover further reveals structural connections to both carboxysomes and thylakoid membranes. Together, these findings identify polyP as an architectural integrator that couples chromosome organization, metabolic compartmentalization, and photosynthetic fitness. ### Competing Interest Statement The authors have declared no competing interest. National Institute of General Medical Sciences, https://ror.org/04q48ey07, R01-GM144731, R35-GM152128 Howard Hughes Medical Institute
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Erin Goley @goleylab.bsky.social · 02/02/2026
Hey alpha aficionados - it's almost time for CauloCon 2026! This free, virtual meeting will feature talks from @brunlabcaulo.bsky.social @thanbichlerlab.bsky.social and @lamasonlab.bsky.social with opps for trainee talks. Register using the link below. 👇
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Alex Bisson @archaeon-alex.bsky.social · 24/12/2025
I am beyond excited to announce that the Bisson Lab has a new home!!! Starting January 2026, I will join the Biology Department at Indiana University Bloomington as Associate Professor with tenure. I am actively recruiting scientists across all levels. More in our website: bissonlab.com/join [1/4]
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Julie Biteen @juliebiteenlab.bsky.social · 14/11/2025
Now in print: @lortzrodz.bsky.social with @schraderlab.bsky.social found that the stress-induced transition of the material properties of bacterial ribonucleoprotein bodies repurposes them from sites of mRNA decay to reservoirs for mRNA storage. @natcomms.nature.com www.nature.com/articles/s41...
nature.com
Stress changes the material state of a bacterial biomolecular condensate and shifts its function from mRNA decay to storage - Nature Communications
Bacterial ribonucleoprotein bodies are dynamic biomolecular condensates that play roles in RNA metabolism. Here, Ortiz-Rodríguez et al. show that, under stress, these condensates shift from a liquid s...
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Julie Biteen @juliebiteenlab.bsky.social · 21/10/2025
Thrilled to share our multidisiplinary work on how genome-wide DNA bridging by H-NS reshapes the stationary phase bacterial nucleoid and affects the transcriptional landscape. With Xindan Wang and @meyerroc.bsky.social www.biorxiv.org/content/10.1...
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STCmicrobeblog @stcmicrobeblog.bsky.social · 20/09/2025
Caulophiles take note 👇 #MicroSky
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Erin Goley @goleylab.bsky.social · 12/09/2025
So proud to have trained with Lucy. She is an exceptional scientist, exceptional person, and exceptional mentor. Huge congrats and so well-deserved. laskerfoundation.org/winners/pion...
laskerfoundation.org
Pioneering approach to bacterial cell biology & national leadership - Lasker Foundation
Lucy Shapiro
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Justine Collier @justinecollier.bsky.social · 11/09/2025
med.stanford.edu/news/all-new...
med.stanford.edu
Scientist, advocate and entrepreneur Lucy Shapiro to receive Lasker-Koshland Special Achievement Award
Lucy Shapiro entered biology “like a bolt of lightning.” A groundbreaking scientist, mentor, drug developer and advocate for science communication is recognized for a lifetime of achievements.
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Martin Thanbichler @thanbichlerlab.bsky.social · 01/05/2025
*** Only a few days left to apply *** Postdoc position at the University of Marburg (Germany), funded within our ERC Advanced Grant "C-SWITCH" Spatiotemporal regulation of cellular processes by CTP-switches in bacteria Apply by 04 May: stellenangebote.uni-marburg.de/jobposting/2...
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Sahar Melamed @saharmelamed.bsky.social · 25/04/2025
Interesting study shows CsrA forms a dynamic, membraneless compartment with sRNAs, mRNAs & the degradosome in E. coli, flipping its role between activating and repressing virulence. A new layer of RNA-based regulation! #microbiology #RNA #CsrA www.nature.com/articles/s41...
nature.com
Formation of a membraneless compartment regulates bacterial virulence - Nature Communications
The RNA-binding protein CsrA switches from upregulation to downregulation of virulence genes in bacteria through unclear mechanisms. Here, the authors show that the switch between promoting and repres...
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Tine @tinearnvig.bsky.social · 15/04/2025
Registration is open, look forward to seeing you! microbialrnameeting.com
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Thibaut Brunet @thibautbrunet.bsky.social · 03/04/2025
Striking new study from @archaeon-alex.bsky.social's lab just out in @science.org on multicellular development induced by compression in Archaea: www.science.org/doi/10.1126/...
science.org
Tissue-like multicellular development triggered by mechanical compression in archaea
The advent of clonal multicellularity is a critical evolutionary milestone, seen often in eukaryotes, rarely in bacteria, and only once in archaea. We show that uniaxial compression induces clonal mul...
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Jake McKinlay @jakemckinlay.bsky.social · 26/03/2025
Spread the word to support science communication through illustrated storytelling. And if you want your own copy of this microbial adventure comic, 5 days remain at 20% off. www.lulu.com/shop/james-m...
lulu.com
A Bacterium in Bangladesh
Follow a single Escherichia coli cell on a remarkable journey during a cholera outbreak in Bangladesh. Learn about how E. coli and other microbes thrive or merely survive in diverse environments inclu...
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Schrader Lab @schraderlab.bsky.social · 13/02/2025
Our team found the N-terminal IDR of bacterial translation initiation factor 2 promotes condensation with RNA that is stimulated in the cold. We think these cold-stimulated IF2 condensates likely explain why the IDR's deletion in E. coli is unable to grow in the cold. www.biorxiv.org/content/10.1...
biorxiv.org
Bacterial IF2’s N-terminal IDR drives cold-induced phase separation and promotes fitness during cold stress
Translation initiation factor 2 (IF2) plays an essential role in bacterial cells by delivering the fMet-tRNAfMet to the ribosome pre-initiation complex. IF2 is known to have an N-terminal disordered r...
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Keren Lasker @kerenlasker.bsky.social · 30/12/2024
1/ 🚨We’re thrilled to share our latest study: "Cellular Function of a Biomolecular Condensate Is Determined by Its Ultrastructure" 🌟 www.biorxiv.org/content/10.1... How do biomolecular condensates achieve their cellular roles? It comes down to their internal structure. 🧵⬇️
biorxiv.org
Cellular Function of a Biomolecular Condensate Is Determined by Its Ultrastructure
Biomolecular condensates play key roles in the spatiotemporal regulation of cellular processes. Yet, the relationship between atomic features and condensate function remains poorly understood. We stud...
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Schrader Lab @schraderlab.bsky.social · 24/11/2024
One year ago today my lab was destroyed in a fire. Nobody was hurt and our key freezer samples survived. My colleague Tamara Hendrickson has graciously hosted all my trainees in her lab since. In January, the Schrader Lab will be officially reopening at Indiana University.
Before the fireafter the fire
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Julie Biteen @juliebiteenlab.bsky.social · 13/11/2024
Thrilled to share Luis' manuscript showing how bacterial ribonucleoprotein bodies (BR-bodies) control RNA metabolism: stress changes the bacterial biomolecular condensate material state *and* shifts function from mRNA decay to storage. #LiveCell #SingleMolecule #Microscopy @schraderlab.bsky.social
Thrilled to share Luis's manuscript showing how RNA metabolism by bacterial ribonucleoprotein bodies (BR-bodies) is controlled: stress changes the bacterial biomolecular condensate material state *and* shifts function from mRNA decay to storage. #LiveCell #SingleMolecule #Microscopy
 
Proposed model showing how the material state of BR-bodies tunes their activity, enabling a transition from mRNA decay enhancement during growth to storage during stress.
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Schrader Lab @schraderlab.bsky.social · 13/11/2024
We're very excited about the new preprint from @juliebiteenlab.bsky.social and our lab. We found that upon stress, BR-bodies material state becomes more solid/gel-like, changing their activity from mRNA decay to mRNA storage. Check it out here: www.biorxiv.org/content/10.1...
biorxiv.org
Stress Changes the Bacterial Biomolecular Condensate Material State and Shifts Function from mRNA Decay to Storage
Bacterial ribonucleoprotein bodies (BR-bodies) are dynamic biomolecular condensates that play a pivotal role in RNA metabolism. We investigated how BR-bodies significantly influence mRNA fate by trans...
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bioRxivpreprint @biorxivpreprint.bsky.social · 13/11/2024
Stress Changes the Bacterial Biomolecular Condensate Material State and Shifts Function from mRNA Decay to Storage www.biorxiv.org/content/10.1101/202…
biorxiv.org
Stress Changes the Bacterial Biomolecular Condensate Material State and Shifts Function from mRNA Decay to Storage https://www.biorxiv.org/content/10.1101/2024.11.12.623272v1
Bacterial ribonucleoprotein bodies (BR-bodies) are dynamic biomolecular condensates that play a pivo
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bioRxivpreprint @biorxivpreprint.bsky.social · 17/08/2024
Microbial reaction rate estimation using proteins and proteomes www.biorxiv.org/content/10.1101/202…
biorxiv.org
Microbial reaction rate estimation using proteins and proteomes https://www.biorxiv.org/content/10.1101/2024.08.13.607198v1
Microbes transform their environments using diverse enzymatic reactions. However, it remains challen
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bioRxivpreprint @biorxivpreprint.bsky.social · 08/02/2024
Formylation facilitates the reduction of oxidized initiator methionines www.biorxiv.org/content/10.1101/202…
biorxiv.org
Formylation facilitates the reduction of oxidized initiator methionines https://www.biorxiv.org/content/10.1101/2024.02.06.579201v1
Within a cell, protein-bound methionines can be oxidized by reactive oxygen species (ROS) or monooxy
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Alex Bisson @archaeon-alex.bsky.social · 23/01/2024
We have a new story out at BiorXiv! Amazing work led by Zach Curtis (Bisson), Pedro Escudeiro (Alva) and John Mallon (Bisson). Great collaboration with @vikramalva.bsky.social (Max Planck) and Mecky Pohlschroder (UPenn). t.co/qGvuQ7mwO1
t.co
Halofilins as Emerging Bactofilin Families of Archaeal Cell Shape Plasticity Orchestrators
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
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bioRxiv Biochemistry @biorxiv-biochem.bsky.social · 11/01/2024
Late consolidation of rRNA structure during co-transcriptional assembly in E. coli by time-resolved DMS footprinting www.biorxiv.org/content/10.1101/202…
biorxiv.org
Late consolidation of rRNA structure during co-transcriptional assembly in E. coli by time-resolved DMS footprinting https://www.biorxiv.org/content/10.1101/2024.01.10.574868v1
The production of new ribosomes requires proper folding of the rRNA and the addition of more than 50
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Schrader Lab @schraderlab.bsky.social · 07/01/2024
tRNA!
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