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Julie Boisard

@protistsforthewin.bsky.social
825 followers 752 following 12 posts

Protists are the best ICM, Molevol, Stairs Lab Uppsala University, Sweden Genome Architecture in Early-Diverging Eukaryotes 🦠🧬 julieboisard.github.io 💻

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Reposted by Julie Boisard
Cell - a Cell Press journal @cp-cell.bsky.social · 23/09/2026
Now online! Direct cell-to-cell transmission of retrotransposons
dlvr.it
Direct cell-to-cell transmission of retrotransposons
Retrotransposons can infect neighboring cells using a mechanism that relies on a small fusogen-like protein rather than on the envelope protein that is typically required for infection.
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Julie Boisard @protistsforthewin.bsky.social · 18/09/2026
Now published :) doi.org/10.1093/bib/... and available here github.com/theLabUpstai...
doi.org
CoMR: an integrative scoring pipeline for comprehensive mitochondrial proteome reconstruction across eukaryotes
Abstract. Mitochondrial proteome reconstruction from eukaryotic sequence data typically relies on prediction of mitochondrial targeting signals (MTSs). How
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Julie Boisard @protistsforthewin.bsky.social · 14/09/2026
CoMR is now published in Briefings in Bioinformatics and available on github github.com/theLabUpstai... #protistsonsky doi.org/10.1093/bib/...
doi.org
CoMR: an integrative scoring pipeline for comprehensive mitochondrial proteome reconstruction across eukaryotes
Abstract. Mitochondrial proteome reconstruction from eukaryotic sequence data typically relies on prediction of mitochondrial targeting signals (MTSs). How
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Reposted by Julie Boisard
CGUE 2026 @cgue2026.bsky.social · 08/07/2026
⏰ The countdown is on! Only 7 days remain to register for CGUE2026. Five days of cutting-edge science, inspiring discussions and networking with the international community studying the evolution and diversity of unicellular eukaryotes. #ComparativeGenomics #Protistology #Protists #Microbiology
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Reposted by Julie Boisard
Courtney Stairs @cstairs.bsky.social · 24/04/2026
Check out the draft program for the Comparative Genomics of Unicellular Eukaryotes meeting! Want to attend? Are you a speaker? Registration is open until May 4, please do this sooner rather than later to help us in the organization of the meeting comparativegenomics2026.com/program/
comparativegenomics2026.com
Program – CGUE 2026
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Reposted by Julie Boisard
Courtney Stairs @cstairs.bsky.social · 11/04/2026
We stumbled upon an unusual gene called 'rqua' in the genome of some freshwater sponges. In microbes, this gene confers the ability to make a ubiquinone analog - rhodoquinone - which can help the respiratory chain run without oxygen.
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Julie Boisard @protistsforthewin.bsky.social · 04/04/2026
#protistsonsky
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Reposted by Julie Boisard
Earth BioGenome Project 🌍 @ebpgenome.bsky.social · 27/02/2026
Huge news 🌍🧬 The Protist 10,000 Genomes Project is joining the Earth BioGenome Project. Protists may represent the majority of eukaryotic diversity — yet only a tiny fraction have reference genomes. Time to change that. 🚀✨ Learn more 👉 ngdc.cncb.ac.cn/p10k/ #EBP #Protists #Genomics #TreeOfLife
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Reposted by Julie Boisard
Gaspar Jekely @jekely.biologists.social.ap.brid.gy · 24/02/2026
I am happy to share the unfinished but nevertheless fascinating autobiography of the late Thomas Cavalier-Smith, written in 2020, shortly before Tom passed away in 2021. I thank Ema Cavalier-Smith for sharing the text with me. I recently finished curating […] [Original post on biologists.social]
Tom Cavalier-Smith in Cornwall UK 23 August 2017, photo  by Neal C-S
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Reposted by Julie Boisard
Andrew Roger @andrewjroger.bsky.social · 23/02/2026
Have a novel protist's genome or transcriptome and want to predict it's mitochondrial proteome? Look no further than CoMR, this handy bioinformatic workflow to help you: www.biorxiv.org/content/10.6... #phylogenetics
biorxiv.org
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Reposted by Julie Boisard
Courtney Stairs @cstairs.bsky.social · 09/02/2026
Check out our latest pre-print of our favourite pets - the breviates. This work was led by Zhezhen Yi in collaboration with @andrewjroger.bsky.social and many others! By studying diverse breviates we were able to see how different metabolic pathways can evolved in response to low-oxygen.
biorxiv.org
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Reposted by Julie Boisard
Miguel Méndez Sandín @sandinmm.eurosky.social · 15/12/2025
New preprint out! Using ~75k environmental OTUs + 77 fossil calibrations, we reconstructed a Proterozoic timeline of eukaryote evolution. Our results show crown eukaryotes were already diversifying >1.6 Ga, long before the first undisputed fossils (~1.05 Ga). 🔗 DOI: www.biorxiv.org/content/10.6...
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Courtney Stairs @cstairs.bsky.social · 13/12/2025
Save the date! The next instalment of Comparative Genomics of Unicellular Eukaryotes is a GO! Join us next year for a programme of talks, posters, ECR/networking activities. Website and registration details to follow in the coming weeks. See you October 5-10 2026 in beautiful San Feliu!!
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Reposted by Julie Boisard
Johana Rotterova @micrott.bsky.social · 19/11/2025
Is it a flagellate? A tiny ball with tentacles? Contamination in my ciliate culture? NEW SUPERGROUP OF EUKARYOTES? Yes to all 4! Meet Solarion - just out in #Nature doi.org/10.1038/s415... Huge congrats to Marek Valt, Cepicka Lab & the star team! Very happy to be part of this project. #ProtistsOnSky
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Julie Boisard @protistsforthewin.bsky.social · 27/09/2025
Now completely published :) Really proud of this paper led with Karla at @cstairs.bsky.social lab. doi.org/10.1093/isme...
doi.org
Anaerobic breviate protist survival in microcosms depends on microbiome metabolic function
Abstract. Anoxic and hypoxic environments serve as habitats for diverse microorganisms, including unicellular eukaryotes (protists) and prokaryotes. To thr
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Reposted by Julie Boisard
Nature @nature.com · 27/08/2025
For some three billion years, unicellular organisms ruled Earth. Then, around one billion years ago, a new chapter of life began go.nature.com/3JyRV4S
go.nature.com
How did life get multicellular? Five simple organisms could have the answer
Single-celled species that often stick together in colonies have researchers rethinking the origin of animals.
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Reposted by Julie Boisard
angela oliverio @oliverio.bsky.social · 22/08/2025
New lab pre-print up! "Twelve species of human parasites make up half the literature on microbial eukaryotes" doi.org/10.1101/2025... We (led by UG Joanna Lepper and with @hbrappap.bsky.social) quantified all mentions of protist species in the scientific literature 🧵 #protistsonsky #microsky
doi.org
Twelve species of human parasites make up half of the literature on microbial eukaryotes
Although microbial eukaryotes comprise the majority of eukaryotic phylogenetic diversity and inhabit nearly all ecosystems globally, most research focuses on only a few species of human parasites. Her...
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Reposted by Julie Boisard
Courtney Stairs @cstairs.bsky.social · 11/08/2025
Check out our recent publication on breviate protists and their microbial communities. In this study, led by PhD student Karla and postdoc Julie, we found that breviate growth under anoxia might be dependent on the metabolic capabilities of the prokaryotes they live with. doi.org/10.1093/isme...
doi.org
pendingpublications
Pending Publication
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Reposted by Julie Boisard
loiic @fleabag78.bsky.social · 08/08/2025
Got lucky to spot some adorable puffins hanging out in the Faroe Islands 🐧🐧📸🪶
atlantic puffins
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Reposted by Julie Boisard
Amoeba Discovery @amoebadiscovery.bsky.social · 09/04/2025
The first issue of Amoeba Discovery is here! This marks the beginning of a new magazine for exploration, creativity, and collaboration across #protistsonsky. Endless thanks to @zlatogursky.bsky.social for the stunning cover illustration! Read the full (free) issue: stefanluketa.com/amoeba-disco...
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loiic @fleabag78.bsky.social · 05/04/2025
A little forest acrobat, busy doing squirrel things 🐿️📸 #RedSquirrel #Mammals #Canon
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Reposted by Julie Boisard
Nikolay Oskolkov @oskolkov.bsky.social · 24/03/2025
Attention ancient environmental DNA folks. In our recent preprint, we provide coordinates of microbial-like regions (contaminated or evolutionary conserved or convergent) for 4,294 eukaryotic reference genomes.
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Julie Boisard @protistsforthewin.bsky.social · 22/03/2025
12600 cranes gathered in Skåne this weekend. It's a magical sight for bird lovers 🕊️
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Reposted by Julie Boisard
Micah Dunthorn @micahdunthorn.bsky.social · 07/03/2025
Registration is now open for the Protistology Nordics meeting 12–13 May in Jyväskylä #protistsonsky www.jyu.fi/en/events/pr...
jyu.fi
Protistology in the Nordics 2025
Come share your exciting new research in all areas of Protistology.
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Reposted by Julie Boisard
Corey Holt @coreyholt.bsky.social · 04/03/2025
Application deadline is today! Feel free to reach out if you have any questions! 🧪 #protistsonsky @uniofbath.bsky.social
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Reposted by Julie Boisard
Randall Munroe @xkcd.com · 26/02/2025
RNA xkcd.com/3056
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Ming Tommy Tang @tommytang.bsky.social · 20/01/2025
Looking at bioinformaticians’ profiles these days, you'd think everyone has decades of experience in cutting-edge single-cell and AI-driven bioinformatics. But something’s missing… 👇
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Julie Boisard @protistsforthewin.bsky.social · 08/01/2025
Winter break reading 🍄 Protists are still the best, but fungi are a close second!
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Reposted by Julie Boisard
loiic @fleabag78.bsky.social · 19/12/2024
This Great Tit knows how to work the camera 📸🪶 #Birds #BirdPhotography #GreatTit #Canon
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Micah Dunthorn @micahdunthorn.bsky.social · 16/12/2024
4th meeting of Protistology Nordics will be at the University of Jyväskylä, Finland from 12– 13 May 2025 www.jyu.fi/en/events/pr... #protist #protistsonsky @uniofjyvaskyla.bsky.social
jyu.fi
Protistology in the Nordics 2025
Come share your exciting new research in all areas of Protistology.
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Reposted by Julie Boisard
loiic @fleabag78.bsky.social · 14/12/2024
The rare beauty of a white deer in the wild 🦌✨ #Mammals #Nature #Wildlife #Photography #Canon
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loiic @fleabag78.bsky.social · 12/12/2024
An alert European hare enjoying the greenery🐇🌿 #mammals #photography #nature #wildlife #canon
European hare
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Reposted by Julie Boisard
Timothy Bredy @twbredy.bsky.social · 12/12/2024
It was only a matter of time. www.cell.com/cell/fulltex...
cell.com
Transposable element exonization generates a reservoir of evolving and functional protein isoforms
Transposable element exonization by unannotated splicing events produces stable protein isoforms with acquired functions that are subject to evolutionary selection.
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Reposted by Julie Boisard
loiic @fleabag78.bsky.social · 09/12/2024
White Wagtail 🪶 Kullaberg Nature Reserve, Sweden 📷 Canon R7 + RF 100-400mm
White Wagtail
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Reposted by Julie Boisard
Fabien Burki @fburki.bsky.social · 10/12/2024
I am looking for an ERC-funded postdoc to work on spatial proteomics of microalgae (red algae and glaucophytes). The ideal candidate will have experience with mass spec and data analysis (R), but above all a keen interest in broad eukaryote evolution and protists #protistsonsky (1/2)
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Jon Jerlström Hultqvist @jonhultqvist.bsky.social · 02/12/2024
Are you or do you know someone interested in symbiosis research? Anaeramoeba is an exciting organism to explore symbiosis in a low-oxygen environment. Less than a week (December 6) to apply for the PhD position in my group! uu.varbi.com/en/what:job/... Please share widely!
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Reposted by Julie Boisard
Laura Eme @lauraeme.bsky.social · 26/11/2024
Please share! Applications due Dec 15th for a starting date in Sep 2025.
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Johanna Joyce @johannajoyce.bsky.social · 25/11/2024
Women are under-represented at senior levels in #academia globally, & across all #science 🧪 disciplines, as shown by these "scissor-shaped curves" ✂️ So how can we ever achieve #gender #equality? We discuss various strategies in this #Cell Commentary #WomeninSTEM www.cell.com/cell/fulltex... 🧵 1/
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Samuel Aroney @aroneys.bsky.social · 26/11/2024
Excited to share “Bin Chicken”, substantially improving genome recovery through rational metagenomic assembly. Applied to public 🌍 metagenomes, it recovered 24,000 novel species 🦠, including 6 novel phyla. doi.org/10.1101/2024... @wwood @rhysnewell @CMR_QUT 🧵1/6
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Julie Boisard @protistsforthewin.bsky.social · 19/11/2024
Looking to the mysterious life of the tiny people of my parents' backyard pond through a toy microscope, then later the hacker(wo)man feeling of trying to understand it with bioinformatics 🔬🦠🧬
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Reposted by Julie Boisard
Yishay Pinto @yishay.bsky.social · 15/11/2024
Starter pack for metagenomics and microbial genomics lovers. go.bsky.app/MFipoLH
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Courtney Stairs @cstairs.bsky.social · 19/11/2024
First post!! Does anyone in Europe have an axenic or monoxenic culture of Stentor, Blepharisma or Spirostomum they would be willing to share? Please DM me :) #protists #ciliates
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angela oliverio @oliverio.bsky.social · 21/10/2024
I put together a 'protists and friends' starter pack! For anyone interested in hearing about current research spanning diverse topics microbial eukaryotic (ie protist++) biology. This list is super incomplete so please tag/comment folks and I'll add! go.bsky.app/HQhnxbC #protistsonsky 🦠🧪
go.bsky.app
Protists and friends!
Join the conversation
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Stephen Turner @stephenturner.us · 16/11/2024
Bluesky for Science Starter packs for genomics, bioinformatics, #Rstats, Nextflow. Moderation lists. Feeds. Let's rebuild the old scitwitter community and keep this place nice blog.stephenturner.us/p/bluesky-fo... 🧬🖥️🧪
blog.stephenturner.us
Bluesky for Science
Bluesky starter packs for genomics, bioinformatics, R, and Nextflow
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Reposted by Julie Boisard
Jon Jerlström Hultqvist @jonhultqvist.bsky.social · 11/11/2024
Want to be amazed by how a symbiont can be located at the center of a cell while still being an epibiont! Please read and be amazed by the symbiosis between Anaerameoba and sulfate-reducing bacteria! Now out in Nature Communications (open access)! rdcu.be/dZGNe (1/11)
rdcu.be
A unique symbiosome in an anaerobic single-celled eukaryote
Nature Communications - Symbiont-housing structures are well-studied in multicellular eukaryotes but rarely in unicellular protists. This study shows that low-oxygen-adapted Anaeramoebae have...
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Randall Munroe @xkcd.com · 13/11/2024
Geometriphylogenetics xkcd.com/3010
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Felix Mikus @fmikus.bsky.social · 18/10/2024
New preprint! #UExM for >200 microbial eukaryotes, all 1670 volumes available via FIJI/Mobie! Thank you to everyone that made it possible especially Armando and @hiralshah.bsky.social , @gautamdey.bsky.social @centriolelab.bsky.social, and @dudinlab.bsky.social! tinyurl.com/PlanExM1
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Albert Vilella, PhD. @albertvilella.bsky.social · 23/05/2024
Oxford Nanopore LC2024 tech update albertvilella.substack.com/p/oxford-nan...
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