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Lorenz Oberkofler

@oberkoflerlorenz.bsky.social
164 followers 163 following 21 posts

PhD Candidate @Weiberg Lab - LMU Munich Plant-microbe interactions - sRNA transport - Extracellular vesicles 🇪🇺🇮🇹

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Reposted by Lorenz Oberkofler
Eirik Lågeide @eiriklag.bsky.social · 01/10/2026
Very excited to share the first preprint from my PhD with the community! This is also the first paper from the Plant Immunogenomics group with @galofir.bsky.social, so stay tuned for more! www.biorxiv.org/content/10.6... 1/n 🧵
biorxiv.org
NO VEIN is an ancestral immunity protein involved in plant-virus interaction
The conservation of immune systems from prokaryotes to eukaryotes can guide discovery of immunity genes across the tree of life. Most studies to date have focused on metazoan systems, while the extent...
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Reposted by Lorenz Oberkofler
Sebastian Samwald (Basti) he/him @samwalds.bsky.social · 23/09/2026
This has originally developed out of a thought along the lines of: "What can you do if you only manage to get weak fluorescence signals?" A short explaining thread 🧵
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Reposted by Lorenz Oberkofler
KunzLab@LMU @kunzlab.bsky.social · 29/08/2026
New PEC story 🌱 led by PhD cand Susi with amazing collabs Grimm, Hause & Robatzek labs! We patch-clamped isolated plastids to show that PECs mediate rapid cation flux across the IE. PECs relay Ca²⁺ signals into plastids & link Ca²⁺ to JA-mediated defense. #plantscience www.pnas.org/doi/10.1073/...
Model of chloroplast Ca²⁺-mediated priming: after a stress trigger, plants show a larger stromal Ca²⁺ signal via PEC1, boosting OPDA and JA production and enhancing defense gene expression compared to baseline
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Reposted by Lorenz Oberkofler
Kay Schneitz @kschneitz.bsky.social · 25/08/2026
Interested in the molecular basis how the plant cell adapts to changes in cell wall biochemistry? Check out the recent paper in Nat Plants by two former truly gifted Ph.D. students Rodion Boikine, Ajeet Chaudhary (@ajeetchaudhary.bsky.social) and collaborators. Cool stuff if I may say so.
Picture depicting the first section of the online version of the paper.
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 10/08/2026
Super happy to finally share our preprint with the community! 🎉 Fungal extracellular vesicles deliver RNA cargo into host cells - but how do they get through the plant cell wall? This question puzzled us and the field for years… 🧵 1/6
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Reposted by Lorenz Oberkofler
Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 05/08/2026
PLEASE SHARE! New job openings in my lab @zmbp-tuebingen.bsky.social. We have a broad interest into the mechanistic basis of how molecular complexes are rewired during cellular development in plants and during invasion by pathogens. 🌱🍄🔬 See details below 👇 #PlantSciJobs
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 09/06/2026
Anyone who has ever tried to transform Botrytis will appreciate what an incredible achievement this is - congratulations!
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 23/05/2026
Had a fantastic time at @gmivienna.bsky.social - excellent science and a great atmosphere. It was a pleasure to share our work on fungal #EVs and I am very grateful for the recognition from the community. Thanks to everyone involved in organizing such a smooth and enjoyable symposium! #Mendel_ECR_26
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Reposted by Lorenz Oberkofler
Gregor Mendel Institute of Molecular Plant Biology @gmivienna.bsky.social · 21/05/2026
Day 1 of the Mendel Early Career Symposium! 100 international researchers gathered for networking, engaging talks & posters, keynote by @emmanuellebayer.bsky.social, & workshop on ChimeraX/AlphaFold. Thanks to the sponsors for supporting expanding horizons in #PlantBiology. #Mendel_ECR_26
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Reposted by Lorenz Oberkofler
Marcel Dickmanns | 🌿❄️🔬 @madic.bsky.social · 14/05/2026
It's out! 🥳 In situ architecture of #plasmodesmata - plant cytoplasmic bridges - by #cryoET. 📝 Paper: www.nature.com/articles/s41... 🧵 Thread: bsky.app/profile/madi... #teamtomo #proteomics #AlphaFold
nature.com
In situ architecture of plasmodesmata in Physcomitrium patens resolved by cryo-electron tomography - Nature Plants
Using cryo-electron tomography, the authors reveal how plasmodesmata (plant cytoplasmic bridges) are gated by cell wall remodelling and how helical protein assemblies scaffold internal membranes, with...
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Reposted by Lorenz Oberkofler
Tora Økland 🌱 @receptora.bsky.social · 11/05/2026
Preprint alert! I am happy to share the first manuscript from my thesis project! We initially wanted an overview of how SymRK evolution compares to other receptors with a similar domain structure, and when we saw how dynamically a particular group of them behaves, we decided to dig deeper...
biorxiv.org
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Reposted by Lorenz Oberkofler
Tora Økland 🌱 @receptora.bsky.social · 10/05/2026
Its preprint season for #TRRPlantMicrobe and in the last weeks a flurry of great plant microbe papers were posted. It's been wonderful seeing these stories take shape over the last years amid a supportive community of young researchers, so I wanted to collect them all in one place. Take a look👇
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Reposted by Lorenz Oberkofler
Fantin Mesny @mesny.bsky.social · 29/04/2026
🎉 📰 Very happy to share the journal publication of our manuscript "Plant-associated fungi co-opt ancient antimicrobials for host manipulation"! #ScienceAdvancesResearch @science.org @teamthomma.bsky.social www.science.org/doi/10.1126/...
science.org
Plant-associated fungi co-opt ancient antimicrobials for host manipulation
Fungal effectors may have evolved from ancient antimicrobials, shaping plant microbiota and immunity during infection.
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 20/04/2026
Phytophthora targets plant extracellular vesicles to promote infection - great story!
nature.com
Phytophthora targets plant extracellular vesicles to promote infection - Nature Microbiology
Phytophthora secretes an infection-induced apoplastic lipase, damaging Arabidopsis extracellular vesicles and suppressing plant defence against infection.
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Reposted by Lorenz Oberkofler
Michael Habig @michaelhabig.bsky.social · 25/03/2026
Now out! We show that TEs can be horizontally transferred between fungal species via Starships. Once transferred, these TEs can become active, changing the genome organization and affecting the lifestyle of the recipient fungus. www.nature.com/articles/s41... @oggenfussursula.bsky.social #TEsky
nature.com
Transposable elements hitchhike on Starships across fungal genomes - Nature Communications
Large mobile genetic elements known as Starships act as vehicles for transferring transposable elements (TEs) between fungi. Here, Griem-Krey et al. show that these ‘hitchhiking’ TEs can drive rapid e...
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Reposted by Lorenz Oberkofler
Pablo J. Sáez @pjsaez.bsky.social · 16/03/2026
This is why we love #CalciumSignaling Look how mechanical damage triggers long range Ca2+ waves in this plant !! By @annalisabellandi.bsky.social, who is now around here ;) Full www.science.org/doi/10.1126/... @science.org #microscopy #cell #mechanobiology 🧪🔬
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Max Planck Institute of Molecular Plant Physiology 🌱🧪 @mpi-mp-potsdam.bsky.social · 11/03/2026
📢New paper alert: 🍄 Friendly #fungi hijack #plant regulator to promote #symbiosis - study uncovers #mechanism that helps fungi to colonize plant #roots 👉 Link: www.nature.com/articles/s41... @an-pocheng.bsky.social @carogutj.bsky.social
Two scientists in lab coats analyzing plant samples in a greenhouse filled with yellow flowers.
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Reposted by Lorenz Oberkofler
The Sainsbury Laboratory @thesainsburylab.bsky.social · 20/02/2026
New Preprint: A specialized ARGONAUTE enables trans-species RNA interference in plant immunity (2026) www.tsl.ac.uk/publications/164506
doi.org
bioRxiv: A specialized ARGONAUTE enables trans-species RNA interference in plant immunity (2026)
Trans-species RNA interference (tsRNAi), in which plants produce small RNAs (sRNAs) to silence target genes in pathogens, has emerged as a promising strategy for disease control. However, whether tsRNAi constitutes an endogenous, regulated immune response remains unclear. Here, we show that ARGONAUTE10 (AGO10) plays a critical role in pathogen-induced tsRNAi. Loss of AGO10 in Arabidopsis abolished pathogen gene silencing during infection, leading to hypersusceptibility to oomycete and fungal pathogens. Importantly, AGO10 rapidly responds to pathogen infection through increased protein accumulation and re-location into discrete cytoplasmic condensates, thus promoting the production of trans-species sRNAs at the pathogen infection sites. This immune responsiveness relies on the N terminal intrinsically disordered region (IDR) of AGO10, which is responsible for sensing and responding to immune activation. Specific features in the IDR partitions AGO10 into two deeply diverged subgroups, AGO10a and AGO10b, with the immune responsiveness and defense function evolutionarily conserved in AGO10a but not AGO10b. Together, these findings establish tsRNAi as a bona fide, evolutionarily conserved immune response and position AGO10 as a signal-responsive hub linking pathogen perception to tsRNAi-based defense.
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Reposted by Lorenz Oberkofler
PM Delaux @pierremarcdelaux.bsky.social · 09/02/2026
Very impressive work identifying novel BIK1 substrates (and immunity players) in Arabidopsis 🔽! www.nature.com/articles/s41...
nature.com
Motif-based substrate mapping of the receptor-like cytoplasmic kinase BIK1 reveals novel components and regulatory nodes of plant immunity - Nature Plants
Cell surface receptors perceive immunogenic elicitors, triggering downstream signalling via receptor-like cytoplasmic kinases such as BIK1. Here the authors define and use the phosphorylation motif of...
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Reposted by Lorenz Oberkofler
Claudia Martinho @cssmartinho.bsky.social · 30/01/2026
One protein. One pathway. A whole germline fate. New paper from my postdoc @mpi-bio-fml.bsky.social out in PNAS: Germline fate determination by a single ARGONAUTE protein in Ectocarpus www.pnas.org/doi/10.1073/...
pnas.org
Germline fate determination by a single ARGONAUTE protein in Ectocarpus | PNAS
ARGONAUTE (AGO) proteins are a highly conserved family of RNA-binding proteins that play central roles in gene regulation and developmental process...
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Reposted by Lorenz Oberkofler
Nature Plants @natplants.nature.com · 09/01/2026
New OA Article: "Rapid local and systemic jasmonate signalling drives the initiation and establishment of plant systemic immunity" rdcu.be/eYeUZ Novel reporter captures spatial temporal dynamics of systemic immunity: signal propagation and establishment depend on JAs.
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Reposted by Lorenz Oberkofler
Hannes Schuler @schulhans.bsky.social · 05/01/2026
Three #postdoc positions available in my lab @unibz.bsky.social focusing on #genomics of #eriosoma #aphids #psyllids and #phytoplasma please repost
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Reposted by Lorenz Oberkofler
Shicheng Guo @shihcheng.bsky.social · 26/12/2025
Explore plasma's extracellular vesicles: 4,500 proteins, 829 lipids unraveled. New insights into health & disease pathways! PMID:41315767, Nat Cell Biol 2025, @NatureCellBio doi.org/10.1038/s41556-025-01795-7 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
doi.org
Multi-omics identify hallmark protein and lipid features of small extracellular vesicles circulating in human plasma | Nature Cell Biology
Extracellular vesicles (EVs) are an essential signalling entity in human plasma implicated in health and disease. Still, their core protein and lipid componentry, which lie at the centre of EV form and function, remain poorly defined. Here we performed high-resolution density gradient fractionation of over 140 human plasma samples to isolate circulating EVs, and systematically constructed their quantitative proteome (4,500 proteins) and lipidome (829 lipids) landscapes using mass spectrometry. We identified a highly conserved panel of 182 proteins (including ADAM10, STEAP23 and STX7) and 52 lipids (including PS, PIPs, Hex2Cer and PAs), providing a deep survey of hallmark molecular features and biological pathways characteristic to circulating EVs. We also mapped the surfaceome diversity, identifying 151 proteins on the EV surface. We further established a set of 42 proteins and 114 lipids features that served as hallmark features of non-EV particles in plasma. We submit ADAM10 and PS(3
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Reposted by Lorenz Oberkofler
Thomas Ott @ottlab.bsky.social · 14/12/2025
Happy to share our latest paper: The symbiosome space needs to be continuously cleared from demethylated pectins to keep rhizobia happy. Former PostDoc Chao Su took this story with him when moving back to China and finished it off. www.nature.com/articles/s41... #PlantScience; @uni-freiburg.de
nature.com
Symbiosome functionality in Medicago truncatula nodules requires continuous clearing of pectins from the symbiosome space - Nature Communications
Here a mechanism for nitrogen fixation maintenance is identified in Medicago truncatula where two polygalacturoneases are expressed in nodules and secreted into the symbiosome space for clearing of ex...
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Reposted by Lorenz Oberkofler
Hannes Schuler @schulhans.bsky.social · 05/12/2025
We are looking for a postdoc to establish our Cell imaging laboratory for investigating plant stress factors. The postdoc will develop and optimize #CLSM technologies including fluorescence lifetime measurements and life imaging @unibz with @simonjunterholzner.bsky.social Please repost
unibz.it
Stellen für Akademisches Personal | Allgemeine und angewandte Entomologie (Prof. Schuler Hannes)
Kompetenzzentrum für Pflanzengesundheit: Vergleichendes Bewertungsverfahren für 1 Stelle/n als „Tecnologo“ erster Ebene mit befristetem Arbeitsvertrag (A)
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Marco Incarbone @incavirus.bsky.social · 02/12/2025
Preprint alert! It is my great pleasure to announce the first manuscript from the lab, a story that started @gmivienna.bsky.social and was mainly accomplished by the intrepid @gesahoffmann.bsky.social at @mpi-mp-potsdam.bsky.social. A brief thread with our findings www.biorxiv.org/content/10.1...
biorxiv.org
AGO5 restricts virus vertical transmission in plant gametophytes
The propagation of a viral infection from a host parent to its progeny is known as vertical transmission, or seed transmission in plants. It allows viral infections to rapidly spread locally via polle...
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Reposted by Lorenz Oberkofler
KunzLab@LMU @kunzlab.bsky.social · 17/11/2025
Hi passionate 🌱🔬 the #MBP2026 by @plantsciencedbg.bsky.social is entering its last registration week. Take some time and ASAP 🏄‍♀️ to: www.pflanzen-molekularbiologie.de/conference-m... . Please repost, like, & spread the word.
Hi passionate 🌱🔬 the #MBP2026 by @plantsciencedbg.bsky.social  is entering its last registration week. Take some time and 🏄‍♀️ to: https://www.pflanzen-molekularbiologie.de/conference-molecular-biology-of-plants/registration
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Reposted by Lorenz Oberkofler
Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 31/10/2025
My main work as postdoc @plantophagy.bsky.social lab in @gmivienna.bsky.social is out in @natplants.nature.com 🌱🎉 We asked how can protein complexes diversify without compromising their function and explored this question using the plant #exocyst complex. www.nature.com/articles/s41...
nature.com
Electrostatic changes enabled the diversification of an exocyst subunit via protein complex escape - Nature Plants
The evolutionary diversification of an exocyst subunit was enabled by electrostatic shifts leading to its dissociation from the ancestral complex.
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Sylvain Gigan @sylvaingigan.bsky.social · 07/10/2025
A strong quality for a good researcher is the ability to sometimes ignore small details, and sometimes delves into them with the greatest care, and more importantly to being able to switch wisely between the two modes.
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Natanella Illouz-Eliaz @natanellae.bsky.social · 19/08/2025
From a gene’s single cell expression–through spatial localization–to novel function, and beyond! Now out @natplants.nature.com We built a comprehensive spatial-transcriptomic atlas of Arabidopsis, revealing cell-type identities across organs in unprecedented detail www.nature.com/articles/s41...
nature.com
A single-cell, spatial transcriptomic atlas of the Arabidopsis life cycle - Nature Plants
This study presents an extensive single-nucleus and spatial transcriptomic atlas of the Arabidopsis life cycle that represents ten distinct developmental time points inclusive of six diverse organs.
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pfeilmeier.bsky.social @pfeilmeier.bsky.social · 29/07/2025
Finally a method to identify plant RNA-binding proteins! 🧬 This enables so much new biology to discover from immunity to development! 🤯 🪴 Established by the incredible Victor Sanchez with @havandenburg.bsky.social @uva.nl Congratulations!!
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Marcel Dickmanns | 🌿❄️🔬 @madic.bsky.social · 26/07/2025
New preprint: In situ Architecture of #Plasmodesmata. Using #cryoET, #AlphaFold & proteomics, we uncover the native organization of plant intercellular nanopores. 🔗 doi.org/10.1101/2025... 🧪🧵1/n #teamtomo #PlantScience #Physcomitrium #Arabidopsis #cryoEM
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 23/06/2025
Still halfway through the last one... damn. Congratulations!
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 15/06/2025
Just back from the #COST Action meeting in Hamburg, where I had the chance to present some of our research on fungal extracellular vesicles and sRNA transport. Always a pleasure to exchange ideas and reconnect with the #exRNA community!
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Tora Økland 🌱 @receptora.bsky.social · 21/05/2025
Early registration for iMMM in Munich (16.-18. September) is open for another 3 weeks ! Make sure to sign up 3 days of mycorrhizal mayhem 🌱🍄 #PlantScience doo.net/en-us/widget...
doo.net
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Agristok @agristok.bsky.social · 15/05/2025
🎓 2 Fully Funded PhD Positions in Agricultural Biotechnology (Entomology) at Free University of Bozen-Bolzano, Italy Discover two fully funded PhD opportunities in Agricultural Biotechnology (Entomology) at the Free University of Bozen-Bolzano, Italy. Conduct advanced pest and parasitoid research…
agristok.net
🎓 2 Fully Funded PhD Positions in Agricultural Biotechnology (Entomology) at Free University of Bozen-Bolzano, Italy
Discover two fully funded PhD opportunities in Agricultural Biotechnology (Entomology) at the Free University of Bozen-Bolzano, Italy. Conduct advanced pest and parasitoid research in one of Europe's most dynamic agricultural regions. Apply by June 11, 2025!
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 05/05/2025
Awesome story! Congratulations to @santyy31.bsky.social and thank you for the great time together @LMU
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Lorenz Oberkofler @oberkoflerlorenz.bsky.social · 29/04/2025
New exciting research from the Weiberg lab!
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Eric Topol @erictopol.bsky.social · 24/01/2025
Welcome immigrants from X interested in science to the friendlier skies of @bsky.app, as documented by a new @nature.com survey (but you already knew that 😉) "Bluesky is much better for science. There is much less toxicity, misinformation, and distractions." www.nature.com/articles/d41...
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