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Thomas Ott

@ottlab.bsky.social
1.9K followers 306 following 53 posts

Plant Cell Biologist; interested in symbiotic plant-microbe interactions, membrane biology, signalling; scientist@ Uni Freiburg, Germany; views are my own. he/him

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Reposted by Thomas Ott
DOMPS @domps-ufr.bsky.social · 26/09/2026
Happy Postdoc Appreciation Week! 🎉 We are celebrating the postdocs who bring new ideas, expertise, and great energy to our DOMPS community! Next to that, let us take this opportunity to introduce our new logo. 💚🧬💙
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Tonni Andersen @tonnigrubeandersen.bsky.social · 22/09/2026
Check out our new preprint: a very cool fluorescence tool developed by @samwalds.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
Intronised fluorophores improve reporter output and biosensor expression in plants
Genetically encoded biosensors are central to plant cell biology, but low reporter signal can limit their use. Here, we developed modular intronised fluorophores to improve reporter output in transien...
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Elke Barbez @elkebarbez.bsky.social · 16/09/2026
CRISPR is widely celebrated as a precise molecular tool in medicine — yet remains controversial in plant breeding, particularly in Europe. 🌱🧬 A striking example of why technologies are judged by much more than what they can do molecularly. Curious? Read, comment and/or share our Correspondence!
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ENSA - Enabling Nutrient Symbioses in Agriculture @ensa-research.bsky.social · 10/09/2026
Exciting to see ENSA research featured by SWR @swr.de.web.brid.gy. In this short TV report, @ottlab.bsky.social and @henrietteruebsam.bsky.social explain how studies of nitrogen-fixing symbioses could inform future work in crops such as cassava and maize. #PlantBiology #ResearchCommunication
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Claudia Martinho @cssmartinho.bsky.social · 24/08/2026
Postdoc opportunity in my group! Please share! 🔁 Investigate the epigenetic mechanisms underlying stress memory in plants 🧬🌱 Looking for someone excited about computational genomics + plant molecular biology. 📍 Dundee, Scotland | 3 years 📅 Apply by 21 Sept www.dundee.ac.uk/work-for-us/...
dundee.ac.uk
Postdoctoral Research Assistant - UOD2369
Closing date: Monday 21 September 2026, 23:59
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Margot Smit @likeyoda1.bsky.social · 24/08/2026
📣 Job alert! 2 Positions starting 2027. PhD position with me and @bayerlab.bsky.social on Robustness of embryonic and stomatal development, part of @greenrobust.de Postdoc position on the regulation of cell state, following up on some exciting snRNAseq dat! Apply now or share! #PlantSciJob
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Tatsuya Nobori @tatsuyanobori.bsky.social · 11/08/2026
We're hiring 🔬🌱🦠 We're looking for someone with confocal microscopy expertise to join our work on plant–microbe interactions @thesainsburylab.bsky.social . A whole new suite of genetically encoded reporters + 3D spatial gene expression tools like PHYTOMap and more. Please share!
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Ralph Hückelhoven @huckelhovenr.bsky.social · 17/08/2026
Professorship in plant breeding in Halle/Germany. Doownload: wcms.itz.uni-halle.de/download.php...
wcms.itz.uni-halle.de
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Universität Freiburg @uni-freiburg.de · 17/08/2026
Forschende des Global Fire Monitoring Center – eine gemeinsame Einrichtung des @mpic.de und der #UniFreiburg warnen: In Deutschland wächst die Gefahr von Landschaftsbränden. Diese betreffen nicht nur Wälder, sondern zunehmend auch Randzonen von Ortschaften & Landwirtschaft. ufr.link/landschaftsb...
Brennendes Stoppelfeld mit der Überschrift: „Landschaftsbrände: Neues Positionspapier empfiehlt Integriertes Feuermanagement und eine nationale Klimakonferenz.“

Foto: AdobeStock_Kyryl Gorlov_375468558
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Anja Geitmann @geitmannlab.bsky.social · 17/08/2026
Postdoc Opportunity at McGill University, Montreal, Canada You have worked with Arabidopsis / other plant model systems & are trained in high-end imaging? Details: www.plantbiomechanics.net/joining-the-... #plants, #Arabidopsis, #postdoc, #jobs, #microscopy, #confocal, #molecularbiology
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COST Action PlantWallK @plantwallk.org · 31/07/2026
📢 Applications are open! PlantWallK Training School: Beyond Intensity: FLIM for Plant Cell Wall Imaging. 🗓 15–16 Sept 2026 📍 Prague, Czech Republic ⏳ Apply by 16 August: plantwallk.org/training-sch... #PlantWallK #FLIM #PlantScience #Microscopy
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KWS Group @kwsgroup.bsky.social · 27/07/2026
Job opportunity! 🌱 At KWS Einbeck (Germany), we have an exciting opening for a Group Lead for Molecular Trait Analysis & Genomics. 👉 Read more & apply online: jobs.kws.com/job/Einbeck-...
jobs.kws.com
Group Lead (m/f/d) for Molecular Trait Analysis and Genomics
Group Lead (m/f/d) for Molecular Trait Analysis and Genomics
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KleineVehnLab @kleinevehnlab.bsky.social · 23/07/2026
Excited to share our latest publication! 🎉 Here @sophiezoe.bsky.social reveals an early developmental time window determining initial growth direction of lateral roots. Wonderful collaboration with @wabniklab.bsky.social and @matesf.bsky.social lab www.pnas.org/doi/10.1073/... @cibss.bsky.social
pnas.org
SHOOT GRAVITROPISM 9 links sensory timing to the initial lateral root growth angle | PNAS
Plants strategically respond to gravity and actively set defined growth angles. These gravitropic set-point angles (GSAs) shape the width and depth...
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Thomas Ott @ottlab.bsky.social · 21/07/2026
Gestern Dreh, heute online. Ein kurzer Bericht über unsere Arbeit hier in Freiburg im Rahmen des @ensa-research.bsky.social Projekts und in Kooperation mit @cibss.bsky.social. Danke an @henrietteruebsam.bsky.social und das ganze Team für die Koordination und Mithilfe. www.swr.de/swraktuell/b...
swr.de
Weniger Erdgas und CO2: Wissenschaftler forschen an Bakterien-Pflanzen-Symbiosen
Kunstdünger braucht viel Erdgas und schadet Klima und Gewässern. Forschende in Freiburg wollen, dass Nutzpflanzen sich mithilfe von Bakterien selbst mit Stickstoff versorgen.
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Botany One @botany.one · 18/07/2026
Group Leader in Fundamental Biology of Legumes // John Innes Centre, Norwich www.jobs.ac.uk/job/DSG151/g... The John Innes Centre is seeking a junior or established researcher to lead a research programme in fundamental plant biology relevant to legumes or other rotation crops. #BotanyJobs
jobs.ac.uk
Group Leader in Fundamental Biology of Legumes at John Innes Centre, Norwich
An opportunity for an academic position as a Group Leader in Fundamental Biology of Legumes is available, as advertised on jobs.ac.uk. Apply now and explore other academic job openings.
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Volker Lipka @volkerlipka.bsky.social · 14/07/2026
We are currently recruiting an Independent Junior Research Group Leader in the field of biotic and/or abiotic stress biology in plants at the University of Göttingen (starting in January 2027). www.uni-goettingen.de/de/644546.ht... Best, Salma Balazadeh & Volker Lipka
uni-goettingen.de
Stellenanzeigen - Georg-August-Universität Göttingen
Webseiten der Georg-August-Universität Göttingen
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CIBSS – Centre for Integrative Biological Signalling Studies @cibss.bsky.social · 13/07/2026
📣 #JobAlert The Faculty of Biology of @uni-freiburg.de invites applications for a Professorship (W3) for Bioinformatics and Molecular Genetics. ❗ Application Deadline: 15 August, 2026 🔗 kurzlinks.de/roi8 #Biology #Bioinformatics #MolecularGenetics
Job alert text with logo of University of Freiburg.
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Thomas Ott @ottlab.bsky.social · 08/07/2026
Hey plant colleagues out there! 3 days to go to apply for the plant biotechnology professorship. Great colleagues @biologyunifreiburg.bsky.social, amazing atmosphere @dompsfr.bsky.social, lovely city to settle. And great support by @cibss.bsky.social. www.nature.com/naturecareer...
nature.com
W3 Professorship for Plant Biotechnology - Freiburg im Breisgau, Baden-Württemberg (DE) job with University of Freiburg (Uni Freiburg) | 12859402
The future position holder will lead an internationally recognized research program that combines excellent basic research with clear perspectives for
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Ralf Reski @reskilab.bsky.social · 01/07/2026
A bit more than a week to apply! W 3 Professorship for Plant Biotechnology. Freiburg, Germany. Great university, great faculty, awesome colleagues. Apply, if you want to be my successor. uni-freiburg.de/en/job/00005...
uni-freiburg.de
University of Freiburg
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Thorsten Langner @thorstenlangner.bsky.social · 01/07/2026
‼️Job altert🚨📢 please spread the word: We're looking for a postdoctoral researcher to join our new department "Phytopathology and Plant Protection" at @unihalle.bsky.social. www.verwaltung.uni-halle.de/DEZERN3/AUSS...
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Min-Yao Jhu @minyaojhu.bsky.social · 24/06/2026
1/ Excited to share our new bioRxiv preprint! "4D spatial transcriptomics reveals nodule identity emerges through stacked parallel developmental programs" 📄 doi.org/10.64898/202... Using Xenium, we generated a 4D (3D space + time) atlas of nodule development in Medicago truncatula.
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Sarah Courbier @scourbier.bsky.social · 29/06/2026
I've got something to "TORC" about! 😅 After 4 years building this project at @biologyunifreiburg.bsky.social, I'm so excited to share that my first independent preprint is now online! ✨ I hope you like it: doi.org/10.64898/202... A short thread... 🧵 #PlantSci #PlantScience
doi.org
The TARGET OF RAPAMYCIN (TOR) kinase controls shade-mediated hypocotyl elongation responses in Arabidopsis.
Plants perceive neighboring vegetation through an enrichment of far-red light (shade) in the environment. These changes in light quality trigger molecular and physiological responses aimed at outgrowi...
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Umeå Plant Science Centre @umeaplantsciencecentre.se · 24/06/2026
🧪🌾VACANCY - How do cell-wall properties shape plant growth?🔬 Join Laura Bacete's group @cellwalldynamics.com as a postdoc and combine plant cell wall biology, biophysics and spatial transcriptomics. Apply by Aug 31👇 www.umu.se/en/work-with...
umu.se
Postdoctoral scholarship (2 years) in Plant Cell Wall Biology, Biophysics, and Spatial Transcriptomics
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Ralf Reski @reskilab.bsky.social · 23/06/2026
Lecturer Plant Biology. Braunschweig, Germany. #plantscijobs #plantscijob #plantsciencejobs www.tu-braunschweig.de/stellenangeb...
tu-braunschweig.de
Lehrkraft (m/w/d) für besondere Aufgaben im Bereich Pflanzenbiologie
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John Innes Centre @johninnescentre.bsky.social · 18/06/2026
VACANCY - Group Leader in Fundamental Biology of Legumes Closing date: 1 September 2026 Salary: competitive Contract: six-year tenure track or direct appointment, depending on experience Apply now: www.jic.ac.uk/vacancies/gr...
We're hiring for a Group Leader in Fundamental Biology of Legumes
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Thomas Ott @ottlab.bsky.social · 19/06/2026
A new documentary on scientific approaches to replace industrial nitrogen fertilizers is now online @artefr.bsky.social (only in DE/FR). Among them is our and @pierremarcdelaux.bsky.social's work @ensa-research.bsky.social further supported by @cibss.bsky.social. www.arte.tv/de/videos/11...
arte.tv
Dünger der Zukunft: Die Stickstoff-Revolution - Die ganze Doku | ARTE
Ohne künstlichen Stickstoffdünger wären die hohen Erträge der industriellen Landwirtschaft undenkbar. Doch der intensive Einsatz schädigt das Klima. Weltweit wird nach klimafreundlichen Alternativen g...
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CIBSS – Centre for Integrative Biological Signalling Studies @cibss.bsky.social · 09/06/2026
#JobAlert The @biologyunifreiburg.bsky.social of @uni-freiburg.de invites applications for a Professorship (W3) for Plant Biotechnology. ❗Application Deadline: 10 July 2026 🔗https://kurzlinks.de/1iyt #SignalsOfLife #PlantScience #CIBSS
Poster announcing the search for a candidate for Full Professorship (W3) for Plant Biotechnology at the University of Freiburg.
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Sjon Hartman @hartman-plantlab.com · 05/05/2026
So happy and proud to share our lab’s first #plantscience research article, revealing that angiosperms have the capacity to encode memory of flooding stress. A heroic effort by @aidamaric.bsky.social in collaboration with @djgibbs.bsky.social and others. A brief 🧵 www.biorxiv.org/content/10.6...
biorxiv.org
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Wouter Kohlen @wkohlen.bsky.social · 11/06/2026
After a journey of roughly 12 years I am very happy to share with you that our manuscript on the spatiotemporal role of ethylene during nodule initiation has finally been published in @theplantcell.bsky.social @aspbofficial.bsky.social academic.oup.com/plcell/advan...
academic.oup.com
Spatiotemporal Dynamics of Ethylene Biosynthesis Shape Infection and Nodule Initiation in Medicago Truncatula
Spatially reprogramming of the expression of ACS genes in Medicago truncatula coordinate localized changes in ethylene levels and response across root tiss
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German Society for Plant Sciences (DBG) @plantsciencedbg.bsky.social · 11/06/2026
#PlantSciJobs #PlantSciJob #PlantScience W3 Professorship: Plant Biotechnology 📍 @uni-freiburg.de succeeding Prof. @reskilab.bsky.social Start: 1 April 2027 Application deadline: 10 July 2026 www.deutsche-botanische-gesellschaft.de/en/job-openi...
deutsche-botanische-gesellschaft.de
Job Openings
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Thomas Ott @ottlab.bsky.social · 12/06/2026
Happy to share our newest preprint. We developed guidelines and analysis workflows for FLIM Imaging in plants. Multiplexing with spectrally overlapping fluorophores in plants is now possible. Have a look. Any feedback is more than welcome. www.biorxiv.org/content/10.6...
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epsoeurope.bsky.social @epsoeurope.bsky.social · 08/06/2026
54th EPSO seminar for European Plant Scientists: 25th June 2026 at 15.00 CET discussing ‘(Super resolution) microscopy in plants’ with Magali Grison, Joris Sprakel and Marie-Cécile Caillaud bit.ly/4dWRy0I . #PlantScience #SDG #HorizonEU
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Reese Richardson @reeserichardson.bsky.social · 05/06/2026
The Thermo Fisher situation keeps getting worse. We've now collected 450+ problematic images presented as verification data in TF's antibody catalog. This includes: 🖌️ Dozens more images with duplications or painting 🖨️ Hundreds of blots that all share the same background (behold slideshow below)
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Jean Keller, PhD @kellerjeanphd.bsky.social · 05/06/2026
We are hiring! Together with @bastien-boussau.bsky.social, we are looking for a motivated candidate in bioinformatic and deep-learning to develop an approach for non-coding regions prediction in eukaryotes. More information and application here: emploi.cnrs.fr/Offres/Docto...
emploi.cnrs.fr
Portail Emploi CNRS - Offre d'emploi - Doctorant / Doctorante en bioinformatique et deep-learning (H/F)
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Isabel saur @izzysaurlab.bsky.social · 04/06/2026
We have an open PhD position in our Mol. Biochemistry of Plant-Microbe Interactions Lab Saurlab.com. Please see details below, share and consider applying. jobportal.uni-koeln.de/ausschreibun...
jobportal.uni-koeln.de
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Jiorgos Kourelis @jiorgoskourelis.bsky.social · 04/06/2026
📢 PDRA Position - Plant Immune Receptor Bioengineering at Imperial College London 🌱 Start: Aug 2026 (flexible) 🧪 Wet lab + bioinformatics 📅 Up to 3 years (ERC-funded) 📍 South Kensington, on site ℹ️ shorturl.at/VIITk 🔗 kourelislab.com #PlantImmunity #PlantPathology 🙏 Share with interested candidates!
shorturl.at
Description
Please note that job descriptions are not exhaustive, and you may be asked to take on additional duties that align with the key responsibilities ment...
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German Society for Plant Sciences (DBG) @plantsciencedbg.bsky.social · 03/06/2026
#PlantSciJobs #PlantSciJob W 3 Professorship Plant Biotechnology @uni-freiburg.de uni-freiburg.de/en/job/00005...
uni-freiburg.de
University of Freiburg
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Gozde Demirer @prof-gozde.bsky.social · 17/03/2026
We're hiring a postdoctoral researcher in plant genome engineering with expertise in synthetic biology, gene editing, and omics, with an interest in developing next-generation technologies for plants.🪴🧬 Available immediately. If interested, send your CV! Feel free to share with your networks.
demirerlab.com
Home | Demirer Lab
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Hatem Rouached @hatem-rouached.bsky.social · 04/06/2026
🔜Two postdoc positions are available in Rouached Lab for a creative individual to lead a project that will explore a new dimension in the field of plant nutrition. Please contact me if you are interested in TOR signaling, epigenetic and/or plant development rouached@msu.edu
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Jean-Michel Ané @jeanmichelane.bsky.social · 02/06/2026
Interested in joining us at @uwbact.bsky.social @uwmadison.bsky.social
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Sjon Hartman @hartman-plantlab.com · 02/06/2026
Excited to see our #plantscience review published in @jxbotany.bsky.social! It really captures our lab’s perspective on how plants use spatiotemporal signaling under environmental contexts when floods occur, to coordinate acclimation responses and achieve stress tolerance. doi.org/10.1093/jxb/...
doi.org
Anticipate, acclimate, recuperate and remember: How spatiotemporal signal integration controls flooding stress resilience in plants
Abstract. Flooding is a major abiotic stress that restricts terrestrial plant growth and survival. A plant tissue’s ability to avoid or sustain critical ox
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Jean-Michel Ané @jeanmichelane.bsky.social · 02/06/2026
The compartmentalized activity of a legume subtilase SBT12a allows symbiosome stabilization | bioRxiv
sco.lt
The compartmentalized activity of a legume subtilase SBT12a allows symbiosome stabilization | bioRxiv
The stabilization of rhizobia in specialized organelles, called symbiosomes, is an evolutionary hallmark for maintaining high rates of nitrogen fixation in legumes. This is achieved by releasing thousands of bacteria from nodular infection threads within in a single plant cell, which poses a great challenge for the host to keep control over these differentiated bacteria. Considering the importance of proteolytic degradation of antimicrobial proteins or generation of symbiosis-promoting peptides, proteolytic activity may represent a key regulatory system. Indeed, we identified the Medicago truncatula subtilisin-like protease (subtilase, SBT) 12a acting as a novel regulator of symbiosome functionality and maintenance. Loss-of-function mutations in SBT12a led to severe symbiotic defects with nodules of sbt12a being characterized by high level induction of defense/senescence-related genes. Using untargeted proteomic High-efficiency Undecanal-based N-Termini EnRichment (HUNTER) we identified and individually confirmed specific SBT12a target proteins that are involved in plant defense responses and symbiosome maintenance. This positions SBT12a as a central host factor controlling symbiosome performance.
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José Dinneny @josedinneny.bsky.social · 02/06/2026
So proud to share our latest publication @CellCellPress! Yue Rui reveals that the same enzyme that makes the wall, cellulose synthase complex (CESA), also tethers the plasma membrane to the wall during water-deficit stress, providing resilience. sciencedirect.com/science/articl…
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Thomas Ott @ottlab.bsky.social · 02/06/2026
Many thanks to Yue Rui and @josedinneny.bsky.social for generously involving us into this great story. Amazing appreciation of the work of @nikolajabel.bsky.social. Congratulations to all authors.
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Max Planck Institute of Molecular Plant Physiology 🌱🧪 @mpi-mp-potsdam.bsky.social · 02/06/2026
📢 #Postdoc opportunity! We're looking for a Postdoc to join the lab of @carogutj.bsky.social at the @mpi-mp-potsdam.bsky.social (Potsdam, Germany). Research focus: #molecular mechanisms of nutrient exchange in arbuscular #mycorrhiza #symbiosis 📩 See www.mpimp-golm.mpg.de/2287446/karr...
mpimp-golm.mpg.de
Career
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Gitta Coaker @gittacoaker.bsky.social · 29/05/2026
📢 Inviting submissions for the MPMI Focus Issue on Plant Receptors and Signaling in Plant-Microbe Interactions! Research & reviews across all areas of immune receptor biology. If you have an idea, please reach out (via link below). Pls repost 🔗 apsjournals.apsnet.org/mpmireceptors
apsjournals.apsnet.org
Plant Immune Receptors in the Spotlight
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KleineVehnLab @kleinevehnlab.bsky.social · 29/05/2026
Wanted: Outstanding plant scientist and fantastic colleague. If your science combines fundamental discovery with future applications, we would love to hear from you @dompsfr.bsky.social @biologyunifreiburg.bsky.social @cibss.bsky.social @uni-freiburg.de uni-freiburg.de/en/job/00005...
uni-freiburg.de
University of Freiburg
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Marc Somssich @somssich.bsky.social · 28/05/2026
Another #PlantScience job opening here at @kwsgroup.bsky.social! We are looking for a #Phytopathology Scientist at our station in Murcia, Spain. As I have already written in one of last posts: Our vegetable division is expanding & it's a good time to get on board! #PlantSciJobs #PlantScienceJobs
jobs.kws.com
Research Scientist Phytopathology (m/f/d)
Research Scientist Phytopathology (m/f/d)
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Eva-Sophie Wallner @eswallner.bsky.social · 27/05/2026
Happy to announce that I have started my own research group at the MPIPZ and that I am looking for a postdoc who would like to investigate Marchantia prothallus development with me! Please spread the word and/or apply if interested :)
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Alex Johnson @ajcellbio.bsky.social · 26/05/2026
This session will showcase some really state-of-the-art imaging techniques to look at cellular architecture (@sventruckenbrodt.bsky.social) and live, contact free biomechanics (@laurabacete.bsky.social)! Sign up below! #expansionmicroscopy #brillouin #plants 🌱🔬
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