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JStark lab

@jstarklab.bsky.social
719 followers 592 following 41 posts

Chasing DNA double strand break repair outcomes and clastogen response scholar.google.com/citations?user=J…

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David Cortez @dkcortez.bsky.social · 22/09/2026
Open Assistant Professor position in my department at Vanderbilt school of Medicine Basic Sciences. medschool.vanderbilt.edu/biochemistry...
medschool.vanderbilt.edu
Open Faculty Positions
Additional Links Faculty Resources Faculty Highlight Videos Faculty Faculty Awards The 2026-2027 faculty search is now open. Department of Biochemistry, School of Medicine—Basic Sciences Vanderbilt Un...
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Yuan He @yuanhejhu.bsky.social · 22/09/2026
A big week for the lab! Two new papers on how cells repair DNA double-strand breaks: one on getting NHEJ started in chromatin, one on processing the ends before ligation. Years of work by a fantastic team.
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Jens Schmidt @jenscs83.bsky.social · 15/09/2026
We are recruiting a postdoctoral fellow to study DNA damage repair via the homologous recombination pathway using quantitative cell biology approaches. The position will be initially supported for two years by the MSU Research Foundation Postdoctoral Scholars program. Please share! 1/5
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Carlos Mendez-Dorantes, PhD @carlosmendezphd.bsky.social · 03/08/2026
Check out our published work: We show that L1 insertion intermediates can recombine with one another or with DNA breaks to form genome rearrangements, highlighting the risk of L1 retrotransposition causing genomic instability. @kathleenhburns.bsky.social www.nature.com/articles/s41...
nature.com
LINE-1 insertion intermediates recombine with one another or with DNA breaks to form genome rearrangements - Nature Communications
LINE-1 retrotransposition is associated with genome instability in cancers, yet the mechanisms are not fully understood. Here, the authors combine recombination reporter assays with long-read sequenci...
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JStark lab @jstarklab.bsky.social · 31/07/2026
Preprint of new collaborative study on MRI @fabferrage.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
Molecular characterization of MRI/CYREN reveals the Ku binding mode and the role of multimerization in stimulating the activity of NHEJ in DNA repair
Mammalian cells primarily repair DNA double-strand breaks through non-homologous end joining (NHEJ), a pathway that requires the Ku heterodimer, DNA-PKcs, XRCC4 complexed with DNA Ligase 4, and XLF as...
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Itai Yanai @itaiyanai.bsky.social · 24/06/2026
🔥 Published today, and just in time for summer conferences, here are your guidelines for presenting badly www.nature.com/articles/s41... rdcu.be/fqa92
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JStark lab @jstarklab.bsky.social · 13/06/2026
PhD graduate #10 @kaelamakins.bsky.social in 20yrs @cityofhope.bsky.social
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Senator Andy Kim @kim.senate.gov · 10/06/2026
Every child deserves to feel seen, heard, and loved – from Delaney Hall Detention Facility in New Jersey to Dilley Detention Center in Texas.
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Graham Dellaire @docdellaire.bsky.social · 23/04/2026
Institutions have to make choices on the kind of education they provide - lots of math classes still have a no calculator rule. I think if you state up front to not use LLMs for some tasks and ask for key assignments to be hand written during class time it would be reasonable to expect adherence.
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JStark lab @jstarklab.bsky.social · 22/04/2026
Our PhD program is constantly debating appropriate use of LLMs/AI in completing homework. If the assignment is writing a Specific Aims page in a writing class, what do we do? We are finding “no LLMs allowed” is not feasible / antiquated. But isn’t writing how we learn to think?
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Veronique Smits @vsmitslab.bsky.social · 20/04/2026
Our latest publication by @jessel-ap.bsky.social is out in @cp-cellreports.bsky.social. We show that DNA damage in late mitosis triggers an ATM-dependent increase in RNF126 and BRAP, which promote cell survival under these conditions. With help from @rfreirelab.bsky.social doi.org/10.1016/j.ce...
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JStark lab @jstarklab.bsky.social · 18/03/2026
WTF!!? 👀 Jeremy Stark — theonion.com/jeremy-stark/
theonion.com
Jeremy Stark
Jeremy Stark, 48, passed away Thursday following a long battle with God.
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Zha Lab @zhalab.bsky.social · 15/01/2026
Check out the GRC for DNA damage and Cancer! Join us in Summy California for a week of DNA repair and Cancer! www.grc.org/dna-damage-m...
grc.org
2026 DNA Damage, Mutation and Cancer Conference GRC
The 2026 Gordon Research Conference on DNA Damage, Mutation and Cancer will be held in Ventura, California. Apply today to reserve your spot.
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Base by Base @basebybase.bsky.social · 03/12/2025
basebybase.castos.com/episodes/mul...
basebybase.castos.com
217: Multiscale triads of meiotic crossover patterning
️Episode 217: Multiscale triads of meiotic crossover patterning In this episode of PaperCast Base by Base, we explore FFT and inverse-FFT analysis of Zip3/Zip2, Hop1 and Zip1 on yeast pachytene chromo...
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JStark lab @jstarklab.bsky.social · 02/12/2025
Great summary and context of our recent study on this podcast. Even includes interpretive song. basebybase.castos.com/episodes/53b...
basebybase.castos.com
216: 53BP1-RIF1 and DNA-PKcs: distinct interactions in chromosomal break repair
️ Episode 216: 53BP1-RIF1 and DNA-PKcs: distinct interactions in chromosomal break repair In this episode of PaperCast Base by Base, we explore This episode reviews a study showing that 53BP1-RIF1 an...
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JStark lab @jstarklab.bsky.social · 26/11/2025
Check this out 👇👇👇
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JStark lab @jstarklab.bsky.social · 24/11/2025
New study from the lab on genetic relationship between 53BP1-RIF1 and DNA-PKcs on DSB repair outcomes. Led by PhD student @kaelamakins.bsky.social www.nature.com/articles/s41...
nature.com
53BP1-RIF1 and DNA-PKcs show distinct genetic interactions with diverse chromosomal break repair outcomes - Nature Communications
DNA double strand breaks can be repaired by several pathways leading to different genetic outcomes. Here, the authors define the interplay between the DNA damage response factors 53BP1-RIF1 and core n...
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JStark lab @jstarklab.bsky.social · 05/11/2025
📢📢Apply now for GRS/GRC on DNA Damage Mutation & Cancer in sunny Ventura CA.
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JStark lab @jstarklab.bsky.social · 22/10/2025
This data is really striking - mRNA vaccine priming ICI response in several tumors
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Senator Chris Van Hollen @vanhollen.senate.gov · 18/10/2025
Today I kicked off No Kings Day with hundreds of fired up patriots at NIH who are standing up to this lawless president. Together we said NO to his attacks on public health. NO to his assault on our Constitution. NO to kings in America. And YES to standing up for our democracy.
youtube.com
Kicking off No Kings Day with fired up patriots at NIH
YouTube video by Senator Chris Van Hollen
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JStark lab @jstarklab.bsky.social · 18/10/2025
No Kings! In Pasadena
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JStark lab @jstarklab.bsky.social · 17/10/2025
Registration is open for the 2025 SoCal Genome Stability Symposium. Free registration. All talks by trainees. www.cityofhope.org/genome-stabi...
cityofhope.org
SoCal Genome Stability Symposium
The annual Genome Stability Symposium provides a forum for trainees in the Southern California region to present their research on the field of genome stability.
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JStark lab @jstarklab.bsky.social · 30/09/2025
www.nature.com/articles/s41... saw @lablegube.bsky.social present this last week. Provides important clarity on RNA at chromosomal DSBs. Including rigorously debunking the nascent synthesis idea.
nature.com
Transcriptional repression facilitates RNA:DNA hybrid accumulation at DNA double-strand breaks - Nature Cell Biology
Saur, Lesage et al. report that RNA:DNA hybrids arise at double-strand breaks in transcribed genes, independently of de novo recruitment of RNA polymerase II/III, as a result of DSB-induced transcriptional repression.
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JStark lab @jstarklab.bsky.social · 25/09/2025
Exciting to have 3 days to focus on this pathway.
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Filiz Kuybu @filizkuybu.bsky.social · 20/09/2025
It’s been a long time coming! Grateful to all co-authors and colleagues who supported this study, especially @yilanfan.bsky.social 🙌 We have been working on this complex for nearly 3 years together and finally managed to tame it. MRN gave us Many Restless Nights, but we’re More Relaxed Now 😎
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bioRxivpreprint @biorxivpreprint.bsky.social · 19/09/2025
L1 insertion intermediates recombine with one another or with DNA breaks to form genome rearrangements www.biorxiv.org/content/10.1101/202…
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JStark lab @jstarklab.bsky.social · 17/09/2025
I’m using this icon for my talk at nhej2025.sciencesconf.org Guess the topic
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JStark lab @jstarklab.bsky.social · 16/09/2025
Gearing up to head to Paris for nhej2025.sciencesconf.org but indulging in some LA delicacies before I go.
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JStark lab @jstarklab.bsky.social · 30/08/2025
I’ve met many raw milk is healthy, we already have the cure for cancer, immunizations are dangerous, HIV isn’t the cause of AIDS people. As a scientist I thought it important to counter with respect and logic, and wonder how we are failing at public health. No more. New response - “that’s stupid!”
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Alex Merz 🇺🇸🇨🇦🇺🇦 @merz.bsky.social · 28/08/2025
I am delighted to announce that the UW Department of Biochemistry has opened searches for TWO tenure-track positions. Descriptions and links in the following two posts.
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Daniel Durocher @durocher1.bsky.social · 28/08/2025
JOB ALERT 🚨 We are hiring TWO principal investigators in cell, molecular, systems, or chemical biology in Toronto, Canada at @sinaihealth.bsky.social. We provide a generous startup, fully funded salary and academic appointment at U of Toronto. www.nature.com/naturecareer... Please repost!
Image of Toronto
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JStark lab @jstarklab.bsky.social · 19/08/2025
We have openings for a postdoctoral training program on DNA Damage and Oncogenic Signaling. Our past trainees have been very successful. Apply by Aug 31 for full consideration. See link for details. www.imgs-coh.edu/postdoctoral...
imgs-coh.edu
Postdoctoral Training Programs
Funded by the National Cancer Institute (T32CA186895), the program at City of Hope provides exceptionally motivated, recent (2 years or less) postdoctoral fellows with scientific knowledge, researc
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Prasad Jallepalli, MD, PhD @prasad.bsky.social · 14/08/2025
this is so wonderful and so critical right now
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David Cortez @dkcortez.bsky.social · 14/08/2025
Advertisements for 2 tenure-track assistant professor positions at Vanderbilt School of Medicine Basic Sciences: www.nature.com/naturecareer... www.nature.com/naturecareer...
nature.com
Assistant Professor of Biochemistry at Vanderbilt University - Nashville, Tennessee job with Vanderbilt University School of Medicine | 12843515
Department of Biochemistry, School of Medicine—Basic Sciences
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Bill Dynan - NAR Cancer Editor @nar-cancer-editor.bsky.social · 14/08/2025
Beyond BRCA status: machine-learning assisted multichannel imaging platform for cell-by-cell analysis of HR competency, enabling patient stratification. “Editor’s Choice” in NAR Cancer. academic.oup.com/narcancer/ar...
academic.oup.com
Automated machine learning profiling with MAP-HR for quantifying homologous recombination foci in patient samples
Abstract. Accurate visualization and quantification of homologous recombination (HR)-associated foci in readily available patient samples are critical for
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Bill Dynan - NAR Cancer Editor @nar-cancer-editor.bsky.social · 05/08/2025
Our sister journal, Nucleic Acids Research, has opened a search for an Executive Editor. Great opportunity for mid-career or senior investigator looking to be part of a great team, handle 100-150 papers per year, and attend the annual EE meeting. Details at: academic.oup.com/nar/pages/ex...
academic.oup.com
NAR seeks a new Executive Editor
Overview of the Journal Nucleic Acids Research (NAR) is a leading open access molecular biology journal published by Oxford University Press. It provides rapid
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Svasti Haricharan @svasti.bsky.social · 28/07/2025
I was thinking about this too as I'm a standing member at NIH and review did the DoD. The amount of time and effort for no monetary benefit that is expected of us is unreasonable even at a 10th percentile funding rate. But at 4%.... what are we even asking of scientists?
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JStark lab @jstarklab.bsky.social · 27/07/2025
4% payline demoralizing for reviewers - review 9 grants each taking 3-4hrs (total reviewed by all is 90) flying to DC, a hotel conference room to discuss the top half of grants (45) 15 min each, 3x a year for 4 yrs. Paid $300. 4% = maybe 3/90, 0-1 that you reviewed funded. I couldn’t.
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Tatiana Moiseeva @tat1anamoiseeva.bsky.social · 17/07/2025
Our new review on how the initiation of DNA replication is coordinated with transcription is now online! Congratulations to @syedshahidmusvi.bsky.social! www.sciencedirect.com/science/arti...
sciencedirect.com
From cooperation to conflicts – a complicated relationship between transcription and replication.
A tight coordination between transcription and DNA replication is essential to maintain genome stability. Both excessive transcription and upregulated…
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Jennie Mason @jenmasonphd.bsky.social · 08/07/2025
😢 RIP. Still to this day my favorite experiment in molecular biology.
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JStark lab @jstarklab.bsky.social · 16/06/2025
Excited this study is out - we helped with an experiment on Paxx www.nature.com/articles/s41...
nature.com
Dynamic assemblies and coordinated reactions of non-homologous end joining - Nature
Structures associated with the final steps of non-homologous end joining (NHEJ) and gap filling present new targets for NHEJ inhibition to enhance efficacy of radiotherapy and accuracy of gene editing...
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JStark lab @jstarklab.bsky.social · 14/06/2025
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JStark lab @jstarklab.bsky.social · 14/06/2025
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Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 11/06/2025
Seems a good time to invite Sen Britt to watch an NIH review panel (aka study section) analyze piles of grants over several days to identify the <10% that win funding. Applications that scientists spent months preparing, whose peers spent weeks poring through in advance of review mtg at NIH.
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Trends in Cell Biology @cp-trendscellbio.bsky.social · 06/06/2025
New twist on BRCA1-mediated DNA recombination repair and tumor suppression
dlvr.it
New twist on BRCA1-mediated DNA recombination repair and tumor suppression
Ever since BRCA1 germline mutations were found to confer a strong predisposition to the development of breast and ovarian cancers, there has been great interest in determining how this protein suppresses tumor formation. Through more than two decades of research, it has become clear that BRCA1 safeguards our genome mainly by promoting DNA repair through homologous recombination (HR). This opinion article outlines our evolving view of BRCA1’s role in end resection, an upstream commitment step for HR, and highlights recent discoveries suggesting that the context in which DNA breaks are generated dictates whether BRCA1 is required for end resection. In addition, strong emerging evidence for the tumor-suppressive function of BRCA1 being mediated predominantly by its indispensable role in supporting RAD51-dependent recombination downstream of end resection is discussed.
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Jeremy Berg @jeremymberg.bsky.social · 23/05/2025
Senator Durbin noted that some (I believe Republican Senators) had indicated the US had been doing more than its share of biomedical research and it was time for other countries take a turn. I felt I had to interrupt to respond...
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Drug Monkey @drugmonkey.bsky.social · 23/05/2025
NCI paylines drop to 7%ile for established investigator applications. It’s at 9%ile for Early Stage Investigators. www.cancer.gov/grants-train...
cancer.gov
Funding Policy - Research Grants
NCI funding policy for research project grant (RPG) awards reflects the funding goals of the institute, NIH, and HHS.
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JStark lab @jstarklab.bsky.social · 22/05/2025
We have a new study out - Distinct functions of PAXX and MRI during chromosomal end joining: iScience www.cell.com/iscience/ful...
cell.com
Distinct functions of PAXX and MRI during chromosomal end joining
A key step of Canonical-Nonhomologous End Joining is synapsis of DNA double strand break (DSB) ends, which appears to be mediated by both the DNA-PKcs dimer and XLF homodimer. We have examined this pr...
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Andreas Panagopoulos @apanagopoulos.bsky.social · 21/05/2025
Delighted to share that the results of my main postdoc project are now published in @nature.com 🔗 doi.org/10.1038/s415...
doi.org
Multigenerational cell tracking of DNA replication and heritable DNA damage - Nature
A multigenerational single-cell tracking approach provides a framework to dissect phenotypic plasticity at the single-cell level, offering insights into cellular processes that may resemble early even...
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Joe Loparo @joeloparo.bsky.social · 21/05/2025
Last week I learned that all my NIH awards were terminated due to perceived acts of antisemitism by Harvard. My understanding (which may be incorrect) is that this has been extended to literally every grant to grad students, postdocs and faculty throughout the university.
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