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F. Javier Rubio

@fjrubio.bsky.social
930 followers 413 following 76 posts

Lecturer at the Department of Statistical Science of UCL. All opinions my own. 🇲🇽🇬🇧 sites.google.com/site/fjavierrubio67 #rstats #JuliaLang #Bayesian #Statistics #Biostatistics

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Reposted by F. Javier Rubio
Timothy Gowers @wtgowers.bsky.social · 23h
The advisory group on mathematics and artificial intelligence, of which I am a member, has just published a set of recommendations concerning the responsible release of mathematical results generated by AI companies using internal models. 1/3 agmai.org/general-sep29/
agmai.org
general-sep29
Responsible Release of AI-Generated Mathematics September 29, 2026 Back to main page Download PDF At present, some frontier AI labs are testing advanced mathematical problems on proprietary models …
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UCL Department of Statistical Science @statisticsucl.bsky.social · 28/09/2026
Prof. Terry Soo arranged a re-union of present and past Heads for the Department of Statistical Science. Epic picture!
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Steven Strogatz @stevenstrogatz.com · 23/09/2026
www.nytimes.com/2026/09/22/s...
nytimes.com
Mathematics Isn’t Just a Game to Let A.I. Solve. History Shows Why. (Gift Article)
In our field of applied mathematics, the long, human process of trial and error — not just the solutions themselves — is often what has led to progress.
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Terence Tao @teorth.bsky.social · 11/09/2026
A group of 25 Fields Medalists, including myself, have made a joint declaration on Math and AI: mathandai.org . We welcome additional signatories. See also this article in the Economist announcing the declaration: www.economist.com/science-and-...
mathandai.org
Declaration — Math and AI
Read the declaration and add your name.
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F. Javier Rubio @fjrubio.bsky.social · 09/09/2026
Today is one of those rare days when arxiv.org/list/stat/new has over 100 new entries (104 today). Getting harder to browse over my morning coffee. #arxiv #statistics
arxiv.org
Statistics
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Reposted by F. Javier Rubio
Pierre-Simon Laplace @learnbayesstats.bsky.social · 31/08/2026
In this special episode of Learning Bayesian Statistics, @alex-andorra.bsky.social is joined by Andrew Gelman, Aki Vehtari, and Richard McElreath to discuss Bayesian Workflow. From simulation and hierarchical pooling to causal inference, there’s a lot to unpack 🎧 lnkd.in/geX2QkxV #Bayesian
learnbayesstats.com
Bayesian Workflow - Gelman, Vehtari & McElreath
Andrew Gelman, Aki Vehtari, and Richard McElreath discuss their new book on Bayesian workflow, reverse Bayes and hierarchical pooling.
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F. Javier Rubio @fjrubio.bsky.social · 04/08/2026
I have now started the migration to #ConnectCloud. It seems to be less painful than I expected, although I still have to go through one document at a time, which is probably not a bad thing, as it gives me a chance to check which documents I still need. connect.posit.cloud/fjrubio
connect.posit.cloud
Posit Connect Cloud
Publish your Python applications, R applications, and documents from GitHub to Posit Connect Cloud
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F. Javier Rubio @fjrubio.bsky.social · 03/08/2026
It looks like #RPubs and #QuartoPub will need to be migrated to #ConnectCloud. It probably makes a lot of sense, but it's also quite a bit of work if you have several tutorials hosted only on RPubs (rpubs.com/FJRubio). Time find more efficient ways to store and manage them posit.co/blog/migrati...
rpubs.com
RPubs
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Reposted by F. Javier Rubio
Martyn Plummer @martynplummer.bsky.social · 02/08/2026
JAGS 5.0.0 is released martynplummer.wordpress.com/2026/08/02/j...
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Jonathan Bartlett @jonathan-bartlett.bsky.social · 24/07/2026
Research Fellow post at LSHTM. Come and work with Njeru Njagi, Matteo Quartagno, Wende Clarence Safari, Aurélien Belot, Bernard Rachet and myself on extending multiple imputation methods, in particular for analyses of electronic health records in cancer. jobs.lshtm.ac.uk/vacancy.aspx...
jobs.lshtm.ac.uk
Job Opportunity at LSHTM: Research Fellow in Statistics
The London School of Hygiene & Tropical Medicine (LSHTM) is one of the world’s leading public health universities. Our mission is to improve health and health equity in the UK and worldwide; working i...
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Reposted by F. Javier Rubio
UCL Department of Statistical Science @statisticsucl.bsky.social · 07/07/2026
Congratulations to our very own Prof. Jim Griffin on winning the 2025 Lindley Prize of the International Society for Bayesian Analysis @isba-bayesian.bsky.social for his paper "Expressing and Visualizing Model Uncertainty in Bayesian Variable Selection Using Cartesian Credible Sets"
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Pierre Alquier @pierrealquier.bsky.social · 04/07/2026
Following the decision of Statistics and Computing to charge (high!) APCs to *all* accepted papers, I decided to resign from the Editorial Board. (Sorry to the let EiC down, he's doing a super job).
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F. Javier Rubio @fjrubio.bsky.social · 28/06/2026
“Springer about to hijack Statistics & Computing” xianblog.wordpress.com/2026/06/28/s...
xianblog.wordpress.com
Springer about to hijack Statistics & Computing
I recently learned that Springer Nature is about to make the reference journal Statistics and Computing, where I published close to twenty papers over the years, fully “open access”, wh…
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Reposted by F. Javier Rubio
Randall Munroe @xkcd.com · 24/06/2026
Sports Commentary xkcd.com/3262/
Comic. [A person and a second person with a ponytail sitting at a table with a screen showing a soccer game behind them.] PERSON 1: They could be in trouble. Over the last 36 years, they’ve gone 0 for 2 when they’ve scored in the 37th minute to lead 2-1 against a team whose country comes before theirs alphabetically. [caption] I wish sports commentators hadn’t discovered p-hacking.
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F. Javier Rubio @fjrubio.bsky.social · 11/06/2026
New preprint with P. Basak and A.R. Linero "Bayesian Causal Machine Learning for Cure Models" arxiv.org/abs/2606.11405 We define causal effects in survival cure models and introduce BartCure, a Bayesian causal machine learning estimation methodology.
arxiv.org
Bayesian Causal Machine Learning for Cure Models
In survival studies, treatments can benefit patients through different mechanisms: a treatment may increase the probability of being cured or delay failure among patients who are not cured. Quantifyin...
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Reposted by F. Javier Rubio
Mine Doğucu @minedogucu.com · 02/06/2026
Hey #stats and #biostats folks I have a new starter pack. Which departments or organizations am I missing here? go.bsky.app/NrqteQw
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F. Javier Rubio @fjrubio.bsky.social · 18/05/2026
This change went under my radar. Heads up for #rstats users: as of devtools 2.5.0 03/2026, install_github() and all other install_*() functions are deprecated in favour of pak. Full migration guide at: devtools.r-lib.org/reference/in... #github
devtools.r-lib.org
Deprecated package installation functions — install-deprecated
These functions have been deprecated in favor of pak, as that is what we now recommend for package installation. There are a few functions which have no pak equivalent, where you can instead call the ...
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Reposted by F. Javier Rubio
Nature @nature.com · 27/04/2026
Fields medallist Terence Tao discusses how ever-evolving technology is transforming mathematicians’ work go.nature.com/4cOt1ZM
go.nature.com
‘The job description is changing’: mathematician Terence Tao on the rise of AI
The Fields medallist discusses how ever-evolving technology is transforming mathematicians’ work.
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F. Javier Rubio @fjrubio.bsky.social · 27/04/2026
New preprint with Z. Wu, F. Leisen, and M. Luque-Fernandez: "Conformalized Super Learner" arxiv.org/abs/2604.22391 We propose integrating the Super Learner with conformal prediction via a weighted majority vote to construct prediction intervals for continuous outcomes with coverage guarantees.
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The Independent @the-independent.com · 23/04/2026
Half a million Britons’ medical data stolen and offered for sale on Alibaba in UK Biobank hack
independent.co.uk
Half a million Britons’ medical data stolen in UK Biobank hack
The participants volunteered their data to help researchers prevent and treat serious illnesses
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Aki Vehtari @avehtari.bsky.social · 07/04/2026
More details about the Bayesian Workflow book and case studies now available on the book web site avehtari.github.io/Bayesian-Wor... (but you still need to wait a bit for the book)
avehtari.github.io
Bayesian Workflow book: Website – Bayesian Workflow book
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American Statistical Association History of Statistics @hos-asa.bsky.social · 07/04/2026
#OTD 1761 Thomas Bayes d. Best known for his theorem, he never published it; his notes were edited posthumously by his friend Richard Price. Much of his early work related to infinite series & numerical analysis; he never published that either & similar results are attributed to Lagrange 1/4🧵
Grave of Thomas Bayes, Bunhill Fields Cemetery London
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F. Javier Rubio @fjrubio.bsky.social · 30/03/2026
March 2026 ISBA Bulletin, featuring a little contribution by Mark Steel and me on the 80th anniversary of the Jeffreys' prior. isba-bulletin.github.io/ISBABulletin/ @isba-bayesian.bsky.social
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American Statistical Association History of Statistics @hos-asa.bsky.social · 27/03/2026
Karl Pearson b #OTD 1857 (d April 27 1936) Founder of biometrics, & developer of mathematical statistical theory with many classical statistical methods still in use. In 1911 he launched the world's first university statistics department at UCL
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F. Javier Rubio @fjrubio.bsky.social · 25/03/2026
Pleased to share that the paper by our student A. Iqbal (co-supervised with E. Ogundimu) has been accepted for publication in Computational Statistics. “Bayesian variable selection in sample selection models using spike-and-slab priors” arxiv.org/abs/2312.03538 R code: github.com/adam-iqbal/s...
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F. Javier Rubio @fjrubio.bsky.social · 10/03/2026
New short paper forthcoming in Statistics & Probability Letters: An objective non-local prior for skew-symmetric models. arxiv.org/abs/2603.08285 This paper develops a Moment-Objective Minimum-Discrepancy (MOOMIN) Prior for testing symmetry against skew-symmetric alternatives.
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War and Peas 🧿 @warandpeas.bsky.social · 11/02/2026
Happy International Day of Women and Girls in Science! #InternationalDayofWomenandGirlsinScience
4-panel Comic "Women in Science" by War and Peas. 1. Man in ancient clothes and wig enters the room. He says, "I've returned from my trip to the future!" 2. "Women are doing science!" 3. Another man answers, "But there's still structural inequality and sexism making it difficult for them?" 4. "YES!" "Thank God!"
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F. Javier Rubio @fjrubio.bsky.social · 04/02/2026
New preprint with my student Eric Chen, co-supervised with Jim Griffin: “Bayesian variable and hazard structure selection in the General Hazard model” arxiv.org/abs/2602.03756 We develop Bayesian methododology for simultaneous selection of variables and the hazard structure in survival analysis
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Andrew Gelman et al. @statmodeling.bsky.social · 15/01/2026
FDA guidance on Bayesian clinical trials statmodeling.stat.columbia.edu/2026/01/15/f...
statmodeling.stat.columbia.edu
FDA guidance on Bayesian clinical trials | Statistical Modeling, Causal Inference, and Social Science
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F. Javier Rubio @fjrubio.bsky.social · 09/01/2026
The effect of the shape (skewness) parameter in skew-symmetric models, Part III Based on Le Cam divergence, showing that the effect of this parameter in some models, such as the skew-normal, is tiny in a neighbourhood of 0 rpubs.com/FJRubio/DivM...
rpubs.com
RPubs - The effect of the shape (skewness) parameter in skew-symmetric models, Part III
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F. Javier Rubio @fjrubio.bsky.social · 08/01/2026
Mathematical Colloquium (at King's College London): A duality in the foundations of probability and statistics through history by Vladimir Vovk www.kcl.ac.uk/events/mathe...
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American Statistical Association History of Statistics @hos-asa.bsky.social · 23/12/2025
#OTD 1763 Richard Price (1723-1791) reads ‘An Essay towards solving a Problem in the Doctrine of Chances' to the Royal Society. It is the basis of what is now called Bayes's Theorem, written by his friend Thomas Bayes who had died 2 years before.
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F. Javier Rubio @fjrubio.bsky.social · 19/12/2025
New paper with J.A. Christen, just accepted in Statistical Methods in Medical Research "Hazard-based distributional regression via ordinary differential equations" preprint: arxiv.org/abs/2512.16336 R and Julia code + data: github.com/FJRubio67/Su... #rstats #JuliaLang #SciML
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Aki Vehtari @avehtari.bsky.social · 11/12/2025
All the material for my Bayesian Data Analysis course is available online, including the lectures, which we re-recorded this fall (some of them by @aloctavodia.bsky.social and Noa Kallioinen while I was on vacation). The video links are listed in the schedule at avehtari.github.io/BDA_course_A...
avehtari.github.io
Bayesian Data Analysis course - Aalto 2025 – Bayesian Data Analysis course
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UCL Department of Statistical Science @statisticsucl.bsky.social · 03/12/2025
4 or more UCL Departmental Studentships Deadline 9 January 2026 PhD Studentships, based at the UCL Department of Statistical Science. Open to Home and Overseas applicants. www.ucl.ac.uk/mathematical... Also, apply for admission to the MPhil/PhD programme. www.ucl.ac.uk/mathematical...
ucl.ac.uk
Research Studentships
Explore UCL Statistics research studentships: funding, opportunities, and support for PhD students to advance statistical science through innovative research and collaboration.
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Warwick Statistics @warwickstats.bsky.social · 14/11/2025
We are hiring! We are recruiting two Assistant Professors. The closing date is 25 January 2026. More information here 🔗: warwick-careers.tal.....
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Inequalities in Cancer Outcomes Network (ICON) @icon-lshtm.bsky.social · 06/11/2025
How can we make cancer care in England both equitable and sustainable for the NHS? 🤔 Join researchers, patient advocates & experts for The Great Debate. This event is part of London Global Cancer Week, co-hosted ICON & the Institute of Cancer Policy @kingscollegelondon.bsky.social 👉 bit.ly/43eRxiY
bit.ly
The great debate: innovation, sustainability & equity in cancer care | LSHTM
The great debate: is delivering innovation compatible with sustainable and equitable cancer care?The current state of cancer care in England is a regular news feature, whether its long waiting
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Amstat-American Statistical Association @amstatnews.bsky.social · 06/11/2025
Journal submissions got you stressed? Daniela Witten of the University of Washington shares advice about editing and dealing with rejection when submitting papers to academic journals. magazine.amstat.org/...
Daniela Witten
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David Firth @firthstat.bsky.social · 30/10/2025
English Indices of Deprivation 2025 (IoD25) and Index of Multiple Deprivation (IMD25) are published today. This is an update in the series, following on from the 2019 #deprivation indices. UK Government website: www.gov.uk/government/s...
gov.uk
English indices of deprivation 2025
Statistics on relative deprivation in small areas in England. Further details are provided at the bottom of this page and in the FAQ document.
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F. Javier Rubio @fjrubio.bsky.social · 23/10/2025
📘 An interesting initial book release by David Rossell on variable and model selection: 👉 davidrusi.github.io/modelSelecti... it provides accessible material for students learning the fundamentals of high-dimensional model selection, and it documents the R package modelSelection (formerly mombf).
davidrusi.github.io
High-dimensional model choice. A hands-on take
High-dimensional model selection with the modelSelection R package
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F. Javier Rubio @fjrubio.bsky.social · 15/10/2025
New paper with E.O. Ogundimu and our PhD student Adam Iqbal, just accepted in Bayesian Analysis Bayesian Variable Selection Under Sample Selection and Model Misspecification doi.org/10.1214/25-B... R code and data can be found at: github.com/adam-iqbal/b...
doi.org
Bayesian Variable Selection Under Sample Selection and Model Misspecification
Sample selection bias arises when missingness in the outcome of interest correlates with the outcome itself, leading to non-randomly selected samples. A common approach to correct bias from sample selection is to use sample selection models that jointly model the selection mechanism and the outcome of interest. Formulating these models typically rely on exclusion restrictions (variables that are predictors of selection but not appearing in the outcome equation) to ensure identifiability of the parameters. However, the choice of exclusion restrictions often depends on heuristics or expert judgment, potentially leading to the inclusion of irrelevant variables or the omission of important ones. Additionally, distributional misspecification and omitted variable bias are frequent challenges in this framework. To formally address these issues, we propose a Bayesian variable selection (BVS) methodology that incorporates both local priors (LPs) and non-local priors (NLPs), enabling the identification of variables with predictive power for the outcome and selection processes. We develop computational tools to conduct BVS in sample selection models based on a Laplace approximation of the marginal likelihood, and characterize the resulting Bayes factor rates under model misspecification. We establish model selection consistency for both classes of priors, showing that the proposed methodology correctly identifies active variables for both the selection process and outcome process asymptotically. The priors are calibrated to account for the possibility of distributional misspecification and omitted variable bias. We present a simulation study and real-data applications to explore the finite-sample effects of model misspecification on BVS. We compare the performance of the proposed methodology against BVS based on spike-and-slab (SS) priors and the Adaptive LASSO (ALASSO), an adaptive weighting of the least absolute shrinkage and selection operator (LASSO).
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F. Javier Rubio @fjrubio.bsky.social · 24/09/2025
New R package PTCMGH: The PTCMGH R package implements promotion time cure models with a general hazard structure. The package, along with a tutorial for simulating and fitting these models, can be found at: github.com/FJRubio67/PT... rpubs.com/FJRubio/PTCMGH #rstats #survival
github.com
GitHub - FJRubio67/PTCMGH: Promotion Time Cure Models with a General Hazard structure
Promotion Time Cure Models with a General Hazard structure - FJRubio67/PTCMGH
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Adrian Raftery @adrianraftery.bsky.social · 22/09/2025
The new Bayesian Social Sciences section of @isba-bayesian.bsky.social has just been created: bss-isba.github.io. The committee is myself as chair, @robinryder.bsky.social, chair elect from 2027, @nialfriel.bsky.social, program chair, @monjalexander.bsky.social, Treasurer, EJWagenmakers, Secretary.
bss-isba.github.io
Home - BSS-ISBA
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Chris Rackauckas @chrisrackauckas.bsky.social · 19/09/2025
DifferentialEquations.jl is many things, and lots of people only use a small portion of it. Check out the JuliaCon 2025 workshop: introduces many aspects of the packages that the developers feel are underutilized and under-understood! #julialang #sciml www.youtube.com/watch?v=lSGF...
youtube.com
A Deep Dive Into DifferentialEquations.jl | JuliaCon Global 2025 | Rackauckas, Smith
YouTube video by The Julia Programming Language
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War and Peas 🧿 @warandpeas.bsky.social · 18/09/2025
4-panel-comic by War and Peas Panel 1: Jim, a man in a yellow jacket, excitedly approaches a woman in a pink dress. He says, "Honey, I finally finished the prediction machine!" while pointing at a prediction machine on a small table. The machine displays an unclear message. Panel 2: The woman, standing next to the prediction machine, says, "I'm leaving you, Jim." Panel 3: The machine's screen reads, "Everyone you love will leave you." Jim, looking at the machine, appears shocked. Panel 4: Jim, with a confident pose, says, "What a success!" The prediction machine now displays a garbled message, "Everyone love will have you," and a "SLAM" sound effect indicates the woman has left, shutting the door behind her.
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Triad sou. @triadsou.bsky.social · 13/09/2025
Handbook of Markov Chain Monte Carlo, 2nd Edition. Radu V. Craiu, Dootika Vats, Galin Jones, Steve Brooks, Andrew Gelman, Xiao-Li Meng (eds.) Chapman & Hall 2026, 680 Pages. www.routledge.com/Handbook-of-...
routledge.com
Handbook of Markov Chain Monte Carlo
This thoroughly revised and expanded second edition of the Handbook of Markov Chain Monte Carlo reflects the dramatic evolution of MCMC methods since the publication of the first edition. With the add...
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International Society for Bayesian Analysis @isba-bayesian.bsky.social · 08/09/2025
The subsequent webinar will be on: 📅 November 5, 2025 (4:00 PM UTC | 11:00 AM EST | 5:00 PM CET) “Model Uncertainty and Missing Data: An Objective Bayesian Perspective” by G. García-Donato, M. Eugenia Castellanos, S. Cabras, A. Quirós, and A. Forte doi.org/10.1214/25-B...
doi.org
Model Uncertainty and Missing Data: An Objective Bayesian Perspective
The interplay between missing data and model uncertainty—two classic statistical problems—leads to primary questions that we formally address from an objective Bayesian perspective. For the general regression problem, we discuss the probabilistic justification of Rubin’s rules applied to the usual components of Bayesian variable selection, arguing that prior predictive marginals should be central to the pursued methodology. In the regression settings, we explore the conditions of prior distributions that make the missing data mechanism ignorable, provided that it is missing at random or completely at random. Moreover, when comparing multiple linear models, we provide a complete methodology for dealing with special cases, such as variable selection or uncertainty regarding model errors. In numerous simulation experiments, we demonstrate that our method outperforms or equals others, in consistently producing results close to those obtained using the full dataset. In general, the difference increases with the percentage of missing data and the correlation between the variables used for imputation. Finally, we summarize possible directions for future research.
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