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Ben Liffner

@benliffner.bsky.social
616 followers 301 following 41 posts

Microbiology nerd 🤓. Future Making Fellow @ The University of Adelaide🦠. Studying parasite cell biology using microscopy🔬🦟🧫.

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Ben Liffner @benliffner.bsky.social · 16/06/2025
Come and join our team! We currently have two PhD scholarships between Danny Wilson and myself We are a supportive, productive, and inclusive research group studying parasite cell biology @ The University of Adelaide in beautiful South Australia scholarships.adelaide.edu.au/Scholarships...
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Ben Liffner @benliffner.bsky.social · 10/06/2025
A dynamic barrier: remodeling of the nuclear envelope during closed mitosis in malaria parasites | mSphere journals.asm.org/doi/10.1128/...
journals.asm.org
A dynamic barrier: remodeling of the nuclear envelope during closed mitosis in malaria parasites | mSphere
When I first encountered the paper by Weiner et al. in 2011 (1), I was struck not just by the data, but by the questions it raised. Their use of focused ion beam scanning electron microscopy (FIB-SEM) to generate high-resolution 3D reconstructions of nuclear pore organization across the intraerythrocytic cycle of Plasmodium falciparum offered a tantalizing glimpse into the nuclear envelope (NE) of a parasite that replicates unlike any model eukaryote (2). The idea that this structure—a defining feature of eukaryotic cells—could remain intact throughout mitosis, while still accommodating spindle formation, organelle inheritance, and gene regulation, challenged my assumptions about cell division.
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Ben Liffner @benliffner.bsky.social · 28/05/2025
Thanks very much for having me, and coming along!
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Ben Liffner @benliffner.bsky.social · 28/05/2025
Thanks very much to the wonderful folks in the new Flinders Health & Medical Research Building for hosting me on Tuesday! Cheers to Nick Eyre and @evahesping.bsky.social for the invitation to speak and for showing me around the beautiful new facility!
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sturalph.bsky.social @sturalph.bsky.social · 22/05/2025
Go Long Huynh! Fancy cell biology and fancy microscopy on artemisinin resistance in Plasmodium parasites at the BioMalPar conference #EMBLMalaria @benliffner.bsky.social @sabsalon.bsky.social @events.embl.org
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The Francis Crick Institute @crick.ac.uk · 29/04/2025
Crick researchers have uncovered how the intestinal Cryptosporidium parasite uses a protein to alter its host’s gut environment, enabling the parasite to survive and replicate. www.crick.ac.uk/news/2025-04...
crick.ac.uk
Researchers uncover how intestinal parasite Cryptosporidium alters host cells
Researchers at the Francis Crick Institute have shown that the Cryptosporidium parasite exports a protein into infected intestinal cells, altering the gut environment and enabling the parasite to surv...
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veupathdb.org @veupathdb.org · 22/04/2025
The new OrthoMCL-7 with OrthoFinder clustering, Similar Groups, and Phylogenetic Trees is 🌟 now live 🌟at orthomcl.org, part of the @veupathdb.bsky.social family of resources. The previous version of OrthoMCL-6.21 is still available as a Legacy site.
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Wallace Marshall @wallaceucsf.bsky.social · 20/04/2025
Cell biology is producing mountains of microscopy data, usually a given paper got that data for some purpose, but what if you could find relevant data that you could use to answer your own questions? in her new preprint, @marymirvis.bsky.social develops Systematic Review methods to do just that
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Sabrina Absalon, Phd @sabsalon.bsky.social · 14/04/2025
🚨 New preprint alert! 🚨 We’ve uncovered a key player in malaria parasite cell division—meet PfAnchor, the first apicoplast-specific dynamin adaptor protein! Check the thread below 🧵for more details. #U_ExM #Malaria #Apicoplast www.biorxiv.org/content/10.1...
biorxiv.org
An Essential Adaptor for Apicoplast Fission and Inheritance in Malaria Parasites
Blood-stage Plasmodium falciparum parasites rely on a non-photosynthetic plastid, the apicoplast, for survival, making it an attractive target for antimalarial intervention. Like the mitochondrion, th...
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bioRxivpreprint @biorxivpreprint.bsky.social · 12/04/2025
Unlocking new understanding of Plasmodium sporozoite biology with expansion microscopy www.biorxiv.org/content/10.1101/202…
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Ben Liffner @benliffner.bsky.social · 12/04/2025
How i feel when I get to look at expanded midguts or salivary glands
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 12/04/2025
Unlocking new understanding of Plasmodium sporozoite biology with expansion microscopy www.biorxiv.org/content/10.1101/202…
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Ben Liffner @benliffner.bsky.social · 12/04/2025
A shoutout to @freddyfrischknecht.bsky.social who has helped me out with my many sporozoite biology queries over the last few years, and likely unknowingly inspired me to find out how many rhoptries a sporozoite has from an email about 6 years ago
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Ben Liffner @benliffner.bsky.social · 12/04/2025
A huge thanks to all my co-authors in this study and a special thanks to @sabsalon.bsky.social for letting me loose on a project that initially had nothing to do with what we were previously working on, but has now greatly shaped our research directions!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
There are plenty of other interesting tidbits and findings in this study, and after peer review we will make all the imaging data available on an online database so anybody can look through the images themselves!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
For the small number of RON11 knockdown parasites that make it to the salivary gland, we found they accumulate in the space between epithelial cells but almost never actually invade or get into the secretory cavity. This interesting observation explains why these parasites are not transmissible!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
More important though, these RON11 knockdown sporozoites only made half the number of rhoptries. And when we looked at the small number of sporozoites that made it to the salivary gland, many of them had no rhoptries at all!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
Looking at these RON11 knockdown parasites, we saw that late in their rhoptry biogenesis, most of them had aberrant looking rhoptries.
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Ben Liffner @benliffner.bsky.social · 12/04/2025
We knew RON11 was also expressed in sporozoites and that its knockdown inhibited salivary gland invasion from a previous study, and we were lucky enough to get access to this parasite line produced by Tomoko Ishino's group www.sciencedirect.com/science/arti...
sciencedirect.com
Rhoptry neck protein 11 has crucial roles during malaria parasite sporozoite invasion of salivary glands and hepatocytes
The malaria parasite sporozoite sequentially invades mosquito salivary glands and mammalian hepatocytes; and is the Plasmodium lifecycle infective for…
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Ben Liffner @benliffner.bsky.social · 12/04/2025
We wanted to put this new knowledge of rhoptry biology to the test by looking at what happens when we knockdown a rhoptry protein, but which to choose? Recently, a study of the protein RON11 showed that knockdown of this protein led to merozoites with 1 rhoptry journals.plos.org/plosbiology/...
journals.plos.org
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Ben Liffner @benliffner.bsky.social · 12/04/2025
This led us to the hypothesis that sporozoites have two pairs of rhoptries that are specialised for each of their invasion events: the salivary gland and hepatocytes
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Ben Liffner @benliffner.bsky.social · 12/04/2025
One unexpected observation was that of the usually 2 pairs of rhoptries in oocyst sporozoites, they were morphologically distinguishable. We called these the dimorphic (different size) and congruent (same size) rhoptry pairs, with the congruent rhoptries specifically used up during SG invasion.
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Ben Liffner @benliffner.bsky.social · 12/04/2025
Wanting to follow the fate of rhoptries through the invasion of sporozoites into the mosquito salivary gland, we could differentiate sporozoites at different stages of this process. Excitingly, we could see that sporozoites use up two rhoptries during salivary gland epithelial cell invasion!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
We then put the segmentation score to the test, using it to develop a timeline for the biogenesis of rhoptries in forming sporozoites!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
In the past, oocyst size was used a proxy for development, but one sporozoite formation started, we saw no real correlation with developmental stage and oocyst size. Instead we developed what we call the segmentation score, using progress through cytokinesis as a way to assess sporozoite development
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Ben Liffner @benliffner.bsky.social · 12/04/2025
Next, we wanted to look at how sporozoites form within the oocyst. But we ran into a problem, oocysts from the same midgut varied massively in their progress through sporozoite development. So how can we compare different oocysts with each other?
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Ben Liffner @benliffner.bsky.social · 12/04/2025
We could see plenty of other organelles/structures in oocysts too, like the basal complex, apicoplast, apical polar rings, rhoptries, centriolar plaque and more!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
Having seen how powerful expansion microscopy was for studying other aspects of parasite biology, we were really keen to see what this technique could allow us to see in mosquito-stage parasites. Being good cell biologists, we first looked at the cool microtubule spindle structures of oocysts!
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Ben Liffner @benliffner.bsky.social · 12/04/2025
Through this, mosquito tissue ultrastructure expansion microscopy (MoTissU-ExM) came to life! A special shoutout to the IUSM PharmTox postdoc professional development grant for funding this travel bmcmethods.biomedcentral.com/articles/10....
bmcmethods.biomedcentral.com
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Ben Liffner @benliffner.bsky.social · 12/04/2025
In 2022, the idea to have a look at sporozoites using expansion microscopy came up after Alexis gave a seminar at IUSM! Early attempts were hit and miss for different reasons, but we really got the technique running smoothly after a month working it up with Thiago @jvr-lab.bsky.social
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Ben Liffner @benliffner.bsky.social · 12/04/2025
Our study looking at sporozoite development and salivary gland invasion using expansion microscopy is now up as a pre-print! A little thread below about this interesting study that was born out of a seminar 🧵 @sabsalon.bsky.social @jvr-lab.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
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Ben Liffner @benliffner.bsky.social · 02/04/2025
Come and work with us! We have a 3yr Research Assistant role working on parasites with fascinating biology If you have experience working with mouse models, parasites, or are excited by the challenge of working on a new organism, I'd encourage you to apply! careers.adelaide.edu.au/cw/en/job/51...
careers.adelaide.edu.au
Learn more about South Australia's new university for the future.
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Omaya Dudin 𓂆 ¦🍉¦🦠¦🔬¦ @dudinlab.bsky.social · 28/03/2025
With Guillermina Ramirez-SanJuan we are very happy to announce the upcoming Latsis Symposium " Shaping microbial life in a changing environment" over July 8-10 at #EPFL Registrations are open til May 23rd. LINK: www.epfl-latsis-2025.org
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Sabrina Absalon, Phd @sabsalon.bsky.social · 26/03/2025
Ten years of bigger samples, better views mcgovern.mit.edu/2025/03/03/t... Thank you for including our lab's contribution in your remarkable piece about what I believe is the most revolutionary method for studying tiny, fascinating apicomplexans. @benliffner.bsky.social @jvr-lab.bsky.social
mcgovern.mit.edu
Ten years of bigger samples, better views - MIT McGovern Institute
Nearly 150 years ago, scientists began to imagine how information might flow through the brain based on the shapes of neurons they had seen under the microscopes of the time. With today’s imaging tech...
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Sabrina Absalon, Phd @sabsalon.bsky.social · 19/03/2025
Congratulations @benliffner.bsky.social. #U_ExM #Malaria revolutionized studying the cell biology of Apicomplexan parasites, and I love the work we did together ;-)
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Ben Liffner @benliffner.bsky.social · 04/03/2025
A massive thanks to @bladerlab.bsky.social for the opportunity to put this mSphere of influence article together! Also @dvorinlab.bsky.social, @ebertiaux.bsky.social, Brochet Lab, & @centriolelab.bsky.social for doing science that shows off why parasites are cool! journals.asm.org/doi/10.1128/...
journals.asm.org
mSphere of Influence: The ever-expanding universe of parasite cell biology | mSphere
Single-celled apicomplexan parasites have to grow, replicate, and divide all of the organelles of a eukaryotic cell all while being a tiny fraction of the size of most other eukaryotes. For example, a...
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Sateriale Lab @saterialelab.bsky.social · 26/02/2025
Cryptosporidium modifies intestinal microvilli through an exported virulence factor!! Phenomenal work from the newly DR’ed Elena Rodrigues www.biorxiv.org/content/10.1...
biorxiv.org
Cryptosporidium modifies intestinal microvilli through an exported virulence factor
Cryptosporidium is a common intestinal infection of vertebrates and a significant threat to public health. Within the epithelial layer of the intestine, the parasite invades and replicates. Infected cells are readily detected under the microscope by the presence of elongated microvilli, particularly around the vacuole where the parasite resides. Here, we identify a family of Cryptosporidium virulence factors that are exported into the host cell during infection and localise to the microvilli. We examine the trafficking and function of the most highly expressed family member, MVP1, which appears to control the elongation of microvilli through engagement of host EBP50 and CDC42. Remarkably, this mechanism closely mirrors that of an enteropathogenic Escherichia coli virulence factor, MAP, which is also known to drive host microvilli elongation during infection. This highlights a unique instance where eukaryotic and prokaryotic virulence factors have convergently evolved to modulate host actin structures through a similar mechanism. ### Competing Interest Statement The authors have declared no competing interest.
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Ben Liffner @benliffner.bsky.social · 21/02/2025
Would have loved to be able to be there in person, but excited and proud to see a great colleague and a great friend in James Blauwkamp deliver a fantastic PhD Defence! Been a wonderful experience to see you grow as a scientist over the years and excited to see what's next 🎉 @sabsalon.bsky.social
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Victorian Infection and Immunity Network @theviin.bsky.social · 21/02/2025
Continuing our Host-Pathogen session, @benliffner.bsky.social from the University of Adelaide shared how expansion microscopy has enabled his work imaging malaria parasites during their development in the mosquito 🦟🔬 A deep dive into how these parasites grow and evolve within their mosquito host!
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Ben Liffner @benliffner.bsky.social · 21/02/2025
Great to get the opportunity to present our work on expansion microscopy of mosquito-stage malaria parasites at Lorne I&I this morning! Cheers to @theviin.bsky.social for the ECR award that allowed me to attend this meeting #LorneIandI
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veupathdb.org @veupathdb.org · 19/02/2025
Two fantastic papers came out in Science identifying Plasmodium essential genes using piggyBac screens. Both datasets are available in PlasmoDB! 🔎 Look up the phenotype graphs of your favorite gene: plasmodb.org/plasmo/app/r... plasmodb.org/plasmo/app/r...
The image shows screenshots of 2 Plasmodium publications in the journal Science, and screenshots of the relevant datasets on PlasmoDB.org. A phenotype graph is also shown as an example.
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Victorian Infection and Immunity Network @theviin.bsky.social · 19/02/2025
Delivering this year's Hertzog Oration is David Underhill coming to us from @cedarssinai.bsky.social in LA, USA. David tells us about pathogen recognition and all things phagocytosis #LorneIandI
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Victorian Infection and Immunity Network @theviin.bsky.social · 19/02/2025
Session 3 of #lorneiandi off to a great start! Our first presenter was Dr Mehreen Datoo from The University of Oxford @ox.ac.uk who spoke about clinical development and success so far of the R21/Matrix-M malaria vaccine.
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Ben Liffner @benliffner.bsky.social · 10/02/2025
JEOL was the sponsor for the conference dinner and so they brought a touch of Japanese flavour to the night haha
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Ben Liffner @benliffner.bsky.social · 10/02/2025
A real honour to receive the inaugural Kat Gaus Award at APMC13 last week @australianmms.bsky.social supported by Zeiss Microscopy Australia & New Zealand. Cheers to everybody for supporting me doing weird and wonderful light microscopy experiments on parasites over the years!
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Sreelakshmi Sreenivasamurthy @sreelakshmi.bsky.social · 07/02/2025
Happy to share that our work on PfFBXO1 is finally online.. www.nature.com/articles/s42... Thanks for the support and congratulations to the team: Jeffrey Dvorin, @bladerlab.bsky.social, Gustavo Baptista and Chris West
nature.com
PfFBXO1 is essential for inner membrane complex formation in Plasmodium falciparum during both asexual and transmission stages - Communications Biology
Functional characterization of PfFBXO1, utilizing cell biology, genetics, and biochemistry, demonstrates essential roles for this protein in formation of the inner membrane complex in asexual merozoit...
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Ben Liffner @benliffner.bsky.social · 07/02/2025
A massive thanks to @sturalph.bsky.social @ijayas.bsky.social, Donna Whelan, Ashley Rozario, and Dawson Ling for a fantastic session and discussion on expansion microscopy yesterday at #APMC13
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Joel Vega-Rodriguez @jvr-lab.bsky.social · 19/01/2025
Our paper on U-ExM for mosquito tissues (MoTissU-ExM) in BMC methods! Great collaboration with @sabsalon.bsky.social and @benliffner.bsky.social bmcmethods.biomedcentral.com/articles/10....
bmcmethods.biomedcentral.com
Mosquito Tissue Ultrastructure-Expansion Microscopy (MoTissU-ExM) enables ultrastructural and anatomical analysis of malaria parasites and their mosquito - BMC Methods
Background Study of malaria parasite cell biology is challenged by their small size, which can make visualisation of individual organelles difficult or impossible using conventional light microscopy. ...
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Ben Liffner @benliffner.bsky.social · 10/01/2025
Is there anybody heading to the Asia-Pacific Microscopy Congress in Brisbane this coming February who has done/is doing expansion microscopy? If so, please DM me
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Ben Liffner @benliffner.bsky.social · 06/01/2025
www.nature.com/articles/s41...
nature.com
Comparative 3D ultrastructure of Plasmodium falciparum gametocytes - Nature Communications
Evers et al. generated exceptionally detailed 3D reconstructions of different malaria parasite stages responsible for pathology and spread of the disease. The nanometre scale ultrastructures shed ligh...
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