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veupathdb.org

@veupathdb.org
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Reposted by @veupathdb.org
David Grayless @davidgrayless.bsky.social · 18/10/2025
Fusarium sacchari is a #fungal and #plantPathogen of crops including #sugarcane in China.
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veupathdb.org @veupathdb.org · 15/05/2026
Our recent webinar recording is live! 👀 If you're interested in uploading your own phenotype data into VEuPathDB platforms, check out our 30 minute video covering phenotype data basics, how to integrate it, and how to explore it alongside other data. Watch it here: www.youtube.com/watch?v=-H1I...
youtube.com
User Data Upload in VEuPathDB
YouTube video by VEuPathDB
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veupathdb.org @veupathdb.org · 11/05/2026
📣 Quick reminder: Our webinar THIS WED, May 13, 2 pm UTC will demonstrate how to upload ✨your own✨ gene lists, phenotype data, etc. privately to VEuPathDB platforms and query it alongside our vast, curated resources. Register now for the zoom link: upenn.zoom.us/meeting/regi...
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veupathdb.org @veupathdb.org · 29/04/2026
Looking for new ways to explore and analyze your own data? Our webinar on Wed, May 13, 2 pm UTC will demonstrate how to upload YOUR OWN gene lists, phenotype data, etc. privately to VEuPathDB sites and query it alongside our vast, curated resources. Register now! upenn.zoom.us/meeting/regi...
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veupathdb.org @veupathdb.org · 27/03/2026
@veupathdb.org Release 69 is now available on beta sites, marking an exciting step forward in modernizing VEuPathDB infrastructure! 🎉 Read our new release to learn more: beta.veupathdb.org/veupathdb.be... And explore the beta sites for yourself! #data #parasites #fungi #vectors
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veupathdb.org @veupathdb.org · 18/03/2026
We will also have a poster in tonight's poster session number 500A #Fungal26 - come learn about some of the new developments including AI integration.
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veupathdb.org @veupathdb.org · 18/03/2026
Come visit our #FungiDB booth at #Fungl26 - we will be there every night. Ask questions, provide feedback, let us know about datasets, enter a user comment and much more!
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veupathdb.org @veupathdb.org · 18/03/2026
📢Help improve community knowledge by submitting a user comment on #FungiDB! #Fungal26 Have a cool publication you'd like to share but lack the time? Try our new AI-powered tool for publication and gene function summaries! fungidb.org/fungidb/app/...
fungidb.org
FungiDB
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veupathdb.org @veupathdb.org · 18/03/2026
@veupathdb.org invites parasitology and protistology researchers using DBs such as PlasmoDB, ToxoDB, AmoebaDB, TriTrypDB, CryptoDB, and related DBs to a community meeting to discuss current status , updates, future plans.🧬 We want your input! 💬 Register for zoom link: upenn.zoom.us/meeting/regi...
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veupathdb.org @veupathdb.org · 17/03/2026
🦟 Calling vector biologists! 💬 We want your input! @VectorBase will host a community meeting on Fri, March 27, to discuss current status, recent updates, and plans for VectorBase and the larger VEuPathDB project. Register for zoom link: upenn.zoom.us/meeting/regi...
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veupathdb.org @veupathdb.org · 16/03/2026
Attention, mycology researchers, we want your input! 🍄 FungiDB will host a virtual community meeting on Thursday, March 26, 2026 at 3 pm UTC to discuss current status, updates and future plans of FungiDB and the wider @veupathdb.org resources. Register for zoom link: upenn.zoom.us/meeting/regi...
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veupathdb.org @veupathdb.org · 16/03/2026
Attending the 33rd #Fungal Genetics Conference in Asilomar? Stop by the #FungiDB booth or poster #500A to connect with our team, get help and see what’s new in #veupathdb databases! See you there!
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veupathdb.org @veupathdb.org · 16/03/2026
📢Help improve community knowledge by submitting a user comment on #FungiDB! Have a cool publication you'd like to share but lack the time? Try our new AI-powered tool for publication and gene function summaries! More: fungidb.org/fungidb/app/...
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veupathdb.org @veupathdb.org · 09/03/2026
Working on #fungi or #oomycetes? 🧫 Boost your data mining skills with expert-led virtual training through the Fungal Pathogen Genomics Virtual Course by @ConnectingSci Don’t miss out: 🗓 Apply by 16 March 2026 coursesandconferences.wellcomeconnectingscience.org/event/fungal...
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veupathdb.org @veupathdb.org · 09/03/2026
Help improve genome annotations for the entire research community with the #FungiDB User Comments Campaign 🆕 Try our AI-powered summary and gene product description tools - just add a PubMedId or upload a paper! More ➡️ fungidb.org/fungidb/app/...
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veupathdb.org @veupathdb.org · 02/03/2026
📣We’re excited to launch the #FungiDB User Comments Campaign in conjunction with #FUNGAL26! Contribute your knowledge & try our AI-powered tools for publication summaries & gene product descriptions & get a free FungiDB mug or even a T-shirt! More ➡️ fungidb.org/fungidb/app/...
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veupathdb.org @veupathdb.org · 02/03/2026
Participate in the #Fungal #Pathogen #Genomics Course (virtual) to get practical experience in data mining with online bioinformatics resources for #fungi and #oomycetes. Apply now: coursesandconferences.wellcomeconnectingscience.org/event/fungal... 📅 Deadline: 16 March 2026
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veupathdb.org @veupathdb.org · 17/02/2026
Headed to Asilomar for the 🧬 #Fungal #Genetics Conference? ℹ️ Visit the #FungiDB help desk to learn about the bioinformatics tools & multi-omics data available for your research. We’d love to hear about your projects & show you what’s new! #Fungal26 #genomics #fungi #oomycetes #plantpathogens
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veupathdb.org @veupathdb.org · 17/02/2026
Working on #fungi or #oomycetes? 🧫 Boost your data mining skills with expert-led virtual training through the Fungal Pathogen Genomics Virtual Course Don’t miss out: 🗓 Apply by 16 March 2026 coursesandconferences.wellcomeconnectingscience.org/event/fungal...
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veupathdb.org @veupathdb.org · 08/01/2026
Attending the 🧬 Plant & Animal Genome Conference 🧬 (Jan 9–13) in San Diego? Don’t miss a @veupathdb.org talk! Omar Harb will present on Saturday morning in the session “Genetics and Genomics of Plant Filamentous Pathogen Effectors.” #PAG33
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veupathdb.org @veupathdb.org · 06/01/2026
✨Happy New Year from the @veupathdb.org team! 🌟 We’re looking ahead to a great year with new data and tools, improved infrastructure, deeper community engagement, and continued efforts toward long-term financial sustainability, so we can keep being your go-to resource. #parasites #fungi #vectors
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Reposted by @veupathdb.org
ParasitesRule @parasitesrule.org · 16/12/2025
🦠 Grad students & postdocs in parasitology: Apply now for the Biology of Parasitism (BoP): Modern Approaches course at @MBLScience. Hands-on labs, expert lectures, and cutting-edge tools. 📅 Summer 2026 | ⏰ Deadline Feb 5 🔗 mbl.edu/courses
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veupathdb.org @veupathdb.org · 15/12/2025
Big thanks to everyone who participated in the 2025 @veupathdb.org virtual workshop last week- it was a busy, engaging time! #data #parasites #fungi If you missed it, all recordings + exercises are available online for asynchronous learning: veupathdb.org/veupathdb/ap...
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veupathdb.org @veupathdb.org · 25/11/2025
⏰ Reminder! The @veupathdb.org virtual workshop starts in exactly two weeks. We will dive into hands-on bioinformatics in a friendly setting, with no coding needed! #data #fungi #parasites #vectors 🧬 💻 ✨ Don’t forget to register and save your spot: upenn.co1.qualtrics.com/jfe/form/SV_...
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Reposted by @veupathdb.org
ASTMH @astmh.bsky.social · 11/11/2025
Exhibitor Spotlight: Swing by the exhibit hall this afternoon to visit @veupathdb.org at Booth 411 and BEI Resources at Booth 402
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veupathdb.org @veupathdb.org · 10/11/2025
@veupathdb.org is at #ASTMH2025 in ❄️🌨️Toronto! 🇨🇦 Stop by our booth in the exhibit hall to learn more about our data resources , and tell us about your research too. Plus, we have stickers and candy, and we're raffling off swag! 🍬☕
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veupathdb.org @veupathdb.org · 07/11/2025
Science, collaboration, and great conversations are just around the corner. In just two days, the @veupathdb.org team will be at the #ASTMH2025 annual conference in Toronto 🇨🇦, Nov 9-13! 🗨️Visit us at booth #411 to learn about our resources and tools and tell us about your work. #TropMed25
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veupathdb.org @veupathdb.org · 05/11/2025
📣 @veupathdb.org is hosting a FREE virtual workshop! Dec 9-11, 2025, 3 hours per day. Short lectures & hands-on exercises will train you to maximize use of VEuPathDB resources to leverage diverse datatypes and generate new hypotheses. Register NOW! upenn.co1.qualtrics.com/jfe/form/SV_...
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veupathdb.org @veupathdb.org · 03/11/2025
📢Job Alert: Bioinformatics Data Engineer at University of Liverpool - seeking a bioinformatician with expertise in pipeline development & genome annotation for analysis and annotation of pan-genomes, making data widely available via VEuPathDB. More: www.jobs.ac.uk/job/DPF336/b...
jobs.ac.uk
Bioinformatics Data Engineer at University of Liverpool
An opportunity for an academic position as a Bioinformatics Data Engineer is available, as advertised on jobs.ac.uk. Apply now and explore other academic job openings.
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veupathdb.org @veupathdb.org · 29/10/2025
📣Advance your skills in #pathogen genomics — no coding required — with the #Fungal Pathogen Genomics (Virtual) course #FungiDB @ensembl.org #mycocsm @yeastgenome.bsky.social #CGD 🗓️ 1–5 June 2026 Deadline: 16 March 2026 Apply here: coursesandconferences.wellcomeconnectingscience.org/event/fungal...
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veupathdb.org @veupathdb.org · 17/10/2025
#FungiDB/#VEuPathDB & #Ensembl are teaming up to improve #fungal & #oomycete genome resources for #phytopathogens — & we want your input! 🧬🍄 🗓️ Complete the survey by Nov 1, 2025: 🔗 zurl.co/gKjC1 Your feedback will guide genome curation, annotation & data integration #genomics #foodsecurity
zurl.co
Qualtrics Survey | Qualtrics Experience Management
The most powerful, simple and trusted way to gather experience data. Start your journey to experience management and try a free account today.
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veupathdb.org @veupathdb.org · 07/10/2025
Another chance for face-to-face connection 💬: @veupathdb.org PI David Roos is at the French Alliance for Parasitology and Health Care @parafrap.bsky.social Host–Parasite Relationships #EMBOWorkshop this week!
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Reposted by @veupathdb.org
veupathdb.org @veupathdb.org · 06/10/2025
Today and tomorrow Oct 6/7, Omar Harb @omarharb.org from VEuPathDB is at the Neurospora 2025 meeting in Schroon Lake, NY! @veupathdb.org / FungiDB community- if you're attending, please stop by and say hello! Tell us about your work and ask questions about ours. 💬 We'd love to connect.
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veupathdb.org @veupathdb.org · 06/10/2025
Today and tomorrow Oct 6/7, Omar Harb @omarharb.org from VEuPathDB is at the Neurospora 2025 meeting in Schroon Lake, NY! @veupathdb.org / FungiDB community- if you're attending, please stop by and say hello! Tell us about your work and ask questions about ours. 💬 We'd love to connect.
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veupathdb.org @veupathdb.org · 25/09/2025
Our user comments campaign may be over, but your user comments are welcome and valuable EVERYDAY! Crowdsourced user knowledge fuels discovery and helps keep gene data accurate, accessible, and impactful. Visit any gene page on @veupathdb.org or component sites to add a comment!
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veupathdb.org @veupathdb.org · 24/09/2025
The final tally of the @veupathdb.org user comments campaign at #MPM2025: Most user comments were entered on AmoebaDB followed by PlasmoDB, and then ToxoDB. 🎉 🏆The real winners: All VEuPathDB users, who benefit from current and reliable gene information!
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veupathdb.org @veupathdb.org · 23/09/2025
The @veupathdb.org user comments campaign at #MPM2025 yielded 200 user comments from 66 attendees! Thanks, contributors 💐 For example: a comment on gene cgd5_3570 on CryptoDB pointed out that GGC proteins exhibit male-specific expression according to single-cell RNA seq. Good to know!
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Reposted by @veupathdb.org
The MRC Centre for Medical Mycology @mrccmm.bsky.social · 16/09/2025
Fungi can be found everywhere. People can get fungal diseases from contact with an infected animal, skin scrapes that are exposed to fungi in dirt or plants, and from breathing fungal spores in the air. 📸 Microscopy: D. Thomson, D. Corzo Leon, A. Hudson, T. Bedekovic, M. M. Guillan
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veupathdb.org @veupathdb.org · 16/09/2025
The @veupathdb.org team is excited to be attending the MPM conference this week! 💬 Stop by our booth to chat with us ⌨️ Participate in our User Comments campaign- share your knowledge on gene pages and pick up your free "Got Parasites?" mug at the booth: veupathdb.org/veupathdb/ap...
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veupathdb.org @veupathdb.org · 11/09/2025
@veupathdb.org communities — connect with us at these upcoming meetings! ✅ Stop by our booth and say hi ✅ Participate in our user comments campaign to win free swag at MPM (starting this Sunday!)✨ veupathdb.org/veupathdb/ap... Will we see you there?
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veupathdb.org @veupathdb.org · 10/09/2025
NEW in @veupathdb.org: Subscription groups in your account! ✅ Green checkmark = active subscriber group Manage group membership from the new Subscription tab in your account (click on the user avatar in the upper right corner of the site). Thanks for supporting open access!
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veupathdb.org @veupathdb.org · 09/09/2025
We are excited to announce that, coinciding with MPM XXXVI, @veupathdb.org is running a user comment campaign now thru’ Sep 18, 2025. Contribute your knowledge to gene pages and win a free mug (or a T-shirt, if you’re an overachiever)! #parasites Details here: veupathdb.org/veupathdb/ap...
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Reposted by @veupathdb.org
British Mycological Society @britmycolsoc.org.uk · 02/09/2025
The Scarce Fungus Weevil lays its eggs only in Cramp Balls (or King Alfred's cakes) - fungi that grow on dead Ash wood. With Ash dieback & the felling of Ash trees threatening their habitat, the beetle's future is uncertain.🌳 Read the #UKFungusDay blog: www.ukfungusday.co.uk/anecessarywe...
ukfungusday.co.uk
A necessary weevil | UK Fungus Day
Home
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Reposted by @veupathdb.org
ParasitesRule @parasitesrule.org · 15/08/2025
Did you submit an abstract to #mpm2025? Notifications went out this week. Check you spam folders if you don't see an email in your inbox. @rmc9z.bsky.social @mjgubbels.bsky.social @omarharb.org
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veupathdb.org @veupathdb.org · 05/08/2025
A study reports that pladienolide B, a splicing inhibitor, reduces #Cryptococcus neoformans growth. Combined treatment with FK506 results in enhanced antifungal activity. Transcriptomic analysis reveals disrupted RNA processing and intron retention. journals.asm.org/doi/10.1128/... #fungi #fungal
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veupathdb.org @veupathdb.org · 01/08/2025
🌾 Rice blast fungus threatens global food security. New study uncovers the role of the GET complex in #Magnaporthe oryzae, showing key proteins (MoGet1/2/3) are vital for growth, stress response & infection. Targeting GET could aid crop protection. doi.org/10.1371/jour...
doi.org
Characterisation of guided entry of tail-anchored proteins in Magnaporthe oryzae
Author summary Rice blast disease, caused by Magnaporthe oryzae is a devastating disease of rice, causing major economic loss in rice production across the globe. Since its isolation in 1892, M. oryza...
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veupathdb.org @veupathdb.org · 01/08/2025
#Candida auris is a deadly, drug-resistant fungus. New study shows the calcineurin pathway controls its heat tolerance, membrane integrity & drug resistance. Targeting this pathway could open doors to better antifungal strategies. #FungalResistance doi.org/10.1371/jour...
doi.org
The calcineurin pathway regulates extreme thermotolerance, cell membrane and wall integrity, antifungal resistance, and virulence in Candida auris
Author summary The fungal pathogen Candida auris presents a global health threat due to its multidrug resistance and high mortality rates. Despite its clinical significance, the molecular mechanisms underlying its virulence and antifungal resistance remain poorly understood. This study investigates the complex role of the calcineurin signaling pathway in C. auris pathogenicity. Deletion of the calcineurin complex impairs extreme thermotolerance and compromises cell membrane and wall integrity, leading to increased susceptibility to azoles and echinocandins, antifungal agents targeting the cell membrane and wall, respectively. We also identified the Crz1 transcription factor as a downstream target of calcineurin signaling. Interestingly, unlike calcineurin mutants, Crz1 mutants are susceptible only to cell-membrane-targeting azoles but surprisingly exhibit increased resistance to cell-wall-targeting echinocandins, suggesting that the calcineurin pathway may regulate multiple transcription factors, including Crz1. Additionally, calcineurin was found to be essential for virulence in vivo, using two different animal infection models, Drosophila and mice. These findings highlight the essential role of the calcineurin pathway in C. auris virulence, offering novel insights into its role in antifungal resistance and virulence, and paving the way for targeted therapies.
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veupathdb.org @veupathdb.org · 20/06/2025
New from @PLOSGenetics: VeA in #Aspergillus nidulans uses nuclear import/export signals to toggle between sexual & asexual development—connecting transcriptional control to secondary metabolism. 🔗 doi.org/10.1371/jour... #Fungi #Mycology #Aspergillus #VelvetComplex #GeneRegulation
doi.org
The Aspergillus nidulans velvet domain containing transcription factor VeA is shuttled from cytoplasm into nucleus during vegetative growth and stays there for sexual development, but has to return in...
Author summary A controlled interplay of networks that control gene expression and the intracellular transport of their respective regulators is essential for survival of multicellular organisms. The ...
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veupathdb.org @veupathdb.org · 17/06/2025
Last week we launched AI-powered gene expression summaries on gene pages on @veupathdb.org, and we made a short 2-minute video to show you how it works. #AI #data 🔬 Explore AI summaries for your favorite genes 💬 Tell us what you think! 👉 Watch the intro video now: youtube.com/shorts/Z0K-B...
youtube.com
AI Summarization
YouTube video by VEuPathDB
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Reposted by @veupathdb.org
Genetics Society of America @genetics-gsa.bsky.social · 11/06/2025
Using an alignment-free k-mer-based phylogenetic method, @rowenahill.bsky.social, @mcmullan0.bsky.social, and the team found that relationships between entire Starships differed from those inferred from captain genes. Read more about Starships fungal transposons in #G3journal: buff.ly/vxOe5oq
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