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Yves Clément

@yvesclement.bsky.social
1.9K followers 1.2K following 1.4K posts

Assistant Prof @ U-Paris-Cité | Institut Jacques Monod Molecular evolution and bioinformatics (and some other things, too)

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Reposted by Yves Clément
Iñaki Ruiz-Trillo @multicellgenome.bsky.social · 1h
#Evolution can innovate without inventing. Cell type families can retain ancient regulatory “vocabularies”, while individual cell types evolve by reshuffling how those motifs are combined. @natecoevo.nature.com New cell types from old regulatory words. We like this! doi.org/10.1038/s415...
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Yves Clément @yvesclement.bsky.social · 23h
Rien ne change : les personnes impliquées font comme si tout avait été balancé alors que Médiapart depuis *toujours* distille au compte goutte
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Yves Clément @yvesclement.bsky.social · 25/09/2026
La musique, c’est difficile. Par exemple, il fait toujours bien de mouiller la nuque avant de jouer du piano à queue
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CNRS Biologie @cnrsbiologie.bsky.social · 24/09/2026
#ResultatScientifique🔎| Comment les gènes d’ARNt racontent-ils l’évolution des végétaux et leur conquête du milieu terrestre ? 🌱 ▶️ buff.ly/4CZHLxs ✍️ Alexandre Berr et Laurence Drouard 🤝@ibmp-cnrs.bsky.social @cnrs-alsace.bsky.social
buff.ly
Des algues aux plantes à fleurs : ce que révèlent les gènes d’ARN de transfert sur l’évolution du végétal
Comment les g&
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Michael Hiller @hillermich.bsky.social · 23/09/2026
Happy to share results of the @bat1kgenomes.bsky.social phase 1, providing reference genomes covering 21 bat families. New insights into bat phylogeny, ancestral genome reconstruction, European origin & ancestral echolocation. Great work by a team of 100+ colleagues www.nature.com/articles/s41...
nature.com
Reference genomes and fossils revise bat family phylogeny and biogeography - Nature
An updated phylogeny of bats is presented, based on new genome assemblies and many ancient fossils and including all known bat families.
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Natalie Cooper @nhcooper123.bsky.social · 23/09/2026
Our update to the BES Data Management Guide is now live! assets.britishecologicalsociety.org/2026/09/2110... Huge thanks to the incredibly talented ECRs who contributed sections. It's an excellent resource that I've already used with my PhD students. ❤️
Cover image of the Data Management guide. Blue cover with a puffin on it! Also features the BES logo, Better Science Guides and our mission Through science we can.
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Reposted by Yves Clément
Dr Mark D. Scherz @markscherz.bsky.social · 21/09/2026
🚨We're hiring a new Curator of Mammals!!🚨 🦍🐕🦝🐅🦓🦌🐃🐖🐏🐫🐘🦏🦛🐿️🦔🦇🦥🦦🦨🦘🦡🐋🦭🦒🧸 Come join the Vertebrate Unit at @nhmdk.bsky.social—a fantastic team in the heart of Denmark's beautiful capital! Amazing collections, incredible history. Please share widely! 🧪🏛️ candidate.hr-manager.net/ApplicationI...
candidate.hr-manager.net
Tenure Track Assistant Professor or Associate Professor and Curator of Mammals
Tenure Track Assistant Professor / Associate Professor, and Curator of Mammals at Natural History Museum Denmark The Natural History Museum Denmark wishes to ap
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 22/09/2026
🇨🇦🧬Welcome aboard! The @canadianbiogenome.bsky.social is a new ERGA Associate Partner. The project is Canada's contribution to the @ebpgenome.bsky.social, working to generate high-quality reference genomes for Canadian species, a great addition to our growing network 🔗 earthbiogenome.ca
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Yves Clément @yvesclement.bsky.social · 20/09/2026
Bon. Je vais devoir appeler ma mère
static.klipy.com
Ninjago Crystalized: Kai Prepares Mentally
ALT: Ninjago Crystalized: Kai Prepares Mentally
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Reposted by Yves Clément
André Marques @amarques.bsky.social · 16/09/2026
Out today in Nature: sex without crossovers. Rhynchospora tenuis makes pollen, fertilises and sets seed, yet 0 crossovers in 10,997 pollen nuclei. Chromosome drive and ~87% seed abortion rebuild the mother's genotype, so the offspring are clones. doi.org/10.1038/s415...
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Yves Clément @yvesclement.bsky.social · 17/09/2026
Laughs in ligne 15 du Grand Paris Express
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Reposted by Yves Clément
CNRS @cnrs.fr · 17/09/2026
Physicienne hors pair, Jacqueline Bloch est spécialiste d’objets microscopiques à mi-chemin entre matière et lumière : les polaritons. Elle vient de recevoir la médaille d’or du CNRS, plus importante récompense de la recherche française. Portrait.
lejournal.cnrs.fr
Jacqueline Bloch, magicienne de la lumière
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CNRS Biologie @cnrsbiologie.bsky.social · 17/09/2026
#ResultatScientifique🔎| Comment expliquer la longévité exceptionnelle de certaines chauves-souris et leur capacité à faire face aux infections virales ? 🦇 @lucievirevolte.bsky.social met en évidence les mécanismes à l’origine de ces adaptations ! buff.ly/AVDFb8q
buff.ly
Chez les chauves-souris Myotis, les mécanismes d’adaptation aux virus et au vieillissement révélés
Comment expliq
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PopGen Vienna @popgenviennaphd.bsky.social · 16/09/2026
The PopGen Vienna Seminar series schedule is ready for the next semester (Oct–Jan). It's jam-packed with fantastic speakers in #evolution, #genetics, #genomics, #popgen, and more! Details and streaming link signup can be found on our website www.popgen-vienna.at/news/seminars/
PopGen Seminar Series Winter Term 2026/27

06.10.2026 – Dan Nussey (Univ. Edinburgh, UK)	Lecture Hall B
The evolutionary ecology of senescence in wild animals

13.10.2026 –  Howard Rundle (Univ. Ottawa, CA)	Lecture Hall B
The population genetic consequences of mate competition: Empirical insights from Drosophila

20.10.2026 – Josephine Pemberton (Univ. Edinburgh, UK)	Lecture Hall A
Evolutionary genetic studies in long term, individually-monitored wild animal populations
SFB Polygenic Adaptation Distinguished Speaker

27.10.2026 – Richard Benton (Univ. Lausanne, CH)	Lecture Hall B
Niche specialisation in nervous systems and beyond

03.11.2026 – Thomas Bataillon (Aarhus Univ., DK)	Lecture Hall A
How to find a “Ruby in the Rubbish?”: On using population genomics to make inference about beneficial mutations, deleterious mutations and their impact on adaptation

24.11.2026 – John Welch (Univ. Cambridge, UK)	Lecture Hall A
When will hybridization be beneficial?

01.12.2026 – Thomas Flatt (Univ. Fribourg, CH)	Lecture Hall A
Inversions and the hunt for the genomic targets of selection

15.12.2026 – Andreas Futschik (Vetmeduni, AT)	Lecture Hall M
Frequentist and Bayesian inference for population genetic data

12.01.2027 – Leif Andersson (Uppsala Univ., SW)	Lecture Hall A
On the origin of Baltic herring by means of natural selection

19.01.2027 – Mikkel Schierup (Aarhus Univ., DK)	Lecture Hall A
De novo mutations, cross-overs and gene conversions across primate species inferred from HiFi sequencing of sperm and testis tissue

26.01.2027 – Thomas Wiehe (Univ. Cologne, DE)	Lecture Hall M
Looking at (some) plant genes with a joint LLM-population genetics lens
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Ornikkar @ornikkar.bsky.social · 15/09/2026
Rita Mitsouko (Par Doisneau)
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Claus Wilke @clauswilke.com · 15/09/2026
The Department of Integrative Biology at UT Austin has two open positions for assistant professors, one in evolutionary biology and one in mechanistic processes. Please share. Apply here: apply.interfolio.com/193270
Two Assistant Professor Positions in Evolutionary Biology and Mechanistic Processes

Description
The Department of Integrative Biology at The University of Texas at Austin seeks to fill two faculty positions in the areas of Evolutionary Biology and Mechanistic Processes, broadly defined. We are looking for candidates who are advancing (1) evolutionary biology or (2) the mechanistic understanding of organismal processes. These positions will be filled at the level of Assistant Professor.


Qualifications
Candidates should be using innovative approaches in evolutionary biology and/or the mechanistic understanding of whole-organism processes. Mechanistic processes include, but are not limited to, behavior, biomechanics, cognition, physiology, and development. The phylogenetic scope of the Evolutionary Biology position may include eukaryotes, prokaryotes, viruses, and the scale may include individual molecules to entire ecosystems and beyond. Candidates for either position may employ experimental, theoretical, or computational frameworks, or a combination thereof. Special consideration will be given to applicants with demonstrated potential for integrating across our target disciplines. 

We seek applicants with a strong record of high-quality research, publications, potential for extramural funding, and a commitment to excellence in teaching and mentorship. A PhD or equivalent is required at the time of appointment, and postdoctoral research experience is strongly recommended.
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Yves Clément @yvesclement.bsky.social · 15/09/2026
Ô joie Ô bonheur Ô félicité Ce soir, je dois aller à une AG de copropriété
static.klipy.com
Kill Me Now Haha
ALT: Kill Me Now Haha
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Yves Clément @yvesclement.bsky.social · 15/09/2026
😔
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Yves Clément @yvesclement.bsky.social · 13/09/2026
Céline qui ?
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Yves Clément @yvesclement.bsky.social · 12/09/2026
A disgrace. biomart was one of the most useful tools out there for genomics
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Reposted by Yves Clément
Ian Sudbery @iansudbery.bsky.social · 12/09/2026
Holy moly, @ensembl.org killed biomart! Hope many R scripts are there out there that depend on biomaRt? How many people have informatics practicals, or undergraduate project instructions that depend on a web interface for bulk selection of data?
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Alexis Stamatakis @stamatak.bsky.social · 12/09/2026
The RAxML-NG v2.0 preprint is out: www.biorxiv.org/content/10.6... v2.0 features integrated model testing, fast branch support metrics, automatic parallelization, phylogenetic difficulty prediction, genotype evolution models, to name but the most important features. And it is A LOT FASTER of course
biorxiv.org
RAxML-NG 2: Automatic model selection, novel tree search heuristics, and fast branch support metrics
RAxML-NG is a widely used tool for maximum likelihood based phylogenetic inference. In the seven years since the last RAxML-NG publication, we have continuously improved and extended the code. Here, w...
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Yves Clément @yvesclement.bsky.social · 12/09/2026
« Maman, j’aime pas la croûte de la pizza » «  C’est pas grave, mets ça dans l’assiette de papa » J’ai la vague impression de m’être fait avoir
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Casey Dunn @caseywdunn.bsky.social · 25/08/2026
My new book, Phylogenetic Biology, is now published. Available online for free at dunnlab.org/phylogenetic... . Physical copies can be purchased at shop.lightningsource.com/b/085?params... or your favorite bookstore.
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Société Française de BioInformatique @handle.invalid · 11/09/2026
‼️ Opération de #maintenance de notre hébergeur ⏳ Site web de la #SFBI et des #bioinformations inaccessibles du 14 au 18 septembre 2026 ⚠️ Impact sur la diffusion des offres d'emploi 👍 Aucun impact sur la liste bioinfo
Freepik design
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Yann Dussert @yanndussert.bsky.social · 11/09/2026
The LBGB team at @genoscopeumr.bsky.social, led by @jm-aury.bsky.social, recently released Hobrac, a tool to investigate synteny between genomes! Can be used for assembly validation or comparative genomics. doi.org/10.64898/202... github.com/Genoscope-LB... See below for what Hobrac can do:
Figure showing some outputs of the Hobrac tool (e.g. ribbon plots & oxford plots), here illutrating synteny between bivalve genomes.
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Yves Clément @yvesclement.bsky.social · 10/09/2026
Être parent, c’est faire des trous dans le fromage à trous qui n’a plus de trous parce que c’est la fin (du fromage à trous)
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bioRxiv Evolutionary Biology @biorxiv-evobio.bsky.social · 10/09/2026
Alternative splicing and gene expression repurpose ancestral genes through distinct evolutionary routes www.biorxiv.org/content/10.64898/20…
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Yves Clément @yvesclement.bsky.social · 10/09/2026
Pas le Perdriau de l'année, du coup
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Yves Clément @yvesclement.bsky.social · 10/09/2026
Another day, another database with broken download links
static.klipy.com
Vlad Vladdy
ALT: Vlad Vladdy
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Ana Martinovici @anamartinovici.bsky.social · 08/09/2026
Workshop done 😀 since I anyway put together a list of resources, I'm going to share it in this thread. So here we go, my top recommendations for how to improve computational reproducibility of your work
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Yves Clément @yvesclement.bsky.social · 10/09/2026
www.youtube.com/watch?v=gUjX...
youtube.com
Futurama - Kill all humans, must kill all humans
YouTube video by Dont You Worry About Quotes
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-Boulet- @bouletcorp.bsky.social · 09/09/2026
Nouveau Rogatons - 09/09/2026 - "Grain de sable" À lire ici: www.bouletcorp.com/rogatons/202... Ou sur Instagram: www.instagram.com/p/DdEwxMSiAb...
La page de titre (en anglais). On voit Boulet une poêle à la main tandis que Natalie passe avec le bébé déchaîné dans les bras.
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Molecular Biology and Evolution @molbioevol.bsky.social · 09/09/2026
Álvarez-Carretero et al. reexamine claims that molecular clocks are uninformative for dating animal and placental mammal origins, vindicating deep molecular divergence estimates over literalist fossil-based ones. 🔗 hhttps://academic.oup.com/mbe/article/43/9/msag211/8766042 #societyjournal #evobio
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Yves Clément @yvesclement.bsky.social · 08/09/2026
Quel est le manteau préféré des musiciens ? Le ciré !!!
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Médéric Gasquet-Cyrus @medericgc.bsky.social · 26/12/2024
Image générée avec OpenAil.
Photo d’une tête d’ail ouverte, avec quelques gousses manquantes
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Yves Clément @yvesclement.bsky.social · 07/09/2026
A banana genome paper *whithout* a banana-shaped Venn diagram
static.klipy.com
Hot Fuzz: Nicholas Angel Says 'Shame'
ALT: Hot Fuzz: Nicholas Angel Says 'Shame'
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Yves Clément @yvesclement.bsky.social · 07/09/2026
Les parents qui sortaient de la maternelle ce matin après avoir laissé leurs enfants
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Elmo's Intense Stare
ALT: Elmo's Intense Stare
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Yves Clément @yvesclement.bsky.social · 07/09/2026
Why not France?????
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Ultimate Pullahoko @pullahoko.bsky.social · 04/09/2026
Ranma
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Yves Clément @yvesclement.bsky.social · 06/09/2026
Ce documentaire, ça change de William Karel (Le premier épisode est très bon)
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Yves Clément @yvesclement.bsky.social · 05/09/2026
L’enfant : - fait une grosse bêtise - se fait gronder - attend un peu - commence à chanter « j’aime ma maman, j’aime mon papa »
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Clever Girl Jurassic Park Scene
ALT: Clever Girl Jurassic Park Scene
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Yves Clément @yvesclement.bsky.social · 04/09/2026
On parle beaucoup du premier jour d'école, mais pas du tout du deuxième...
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European Research Council (ERC) @erc.europa.eu · 03/09/2026
📣 Good news! 📣 Results of the ERC 2026 Starting Grant call are out! Funding worth a total of €705 million will go to 421 early-career researchers across Europe. Discover who, what and where 👉 link.europa.eu/9M3MmN 🧪 #ERCStG #FrontierResearch #HorizonEurope 🇪🇺 @scienceinnovation.ec.europa.eu
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Yves Clément @yvesclement.bsky.social · 03/09/2026
"Habille ta fille de 3 ans" challenge : est-ce un pantalon de pyjama ou un vrai pantalon ?
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Société Française de BioInformatique @handle.invalid · 03/09/2026
Une rentrée sur les chapeaux de roue pour la #SFBI qui participe aux Assises pour l'Université et la Recherche à Paris Les Assises s'ouvriront ce 3/09 par un colloque retransmis sur Youtube live : - 3/09 : youtu.be/VYGd2ilBcXE - 4/09 : youtu.be/mDXmhOGV5os Programme : agorasur.fr/assises-pour....
youtu.be
Les assises de la recherche 3 septembre
YouTube video by Politique Des Sciences
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Nicolas Berrod @nicolasberrod.bsky.social · 01/09/2026
🟡🟠🔴 Petite révolution dans la vigilance #météo : il y aura, désormais, plusieurs couleurs possibles au sein d'un même département. Cela vaut pour les risques de vent, d’orages, de pluie-inondation et de neige-verglas. Un fil ⤵️ (exclu Le Parisien) 1/8 www.leparisien.fr/me...
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Lucie Etienne @lucievirevolte.bsky.social · 31/08/2026
Insights into longevity & virus-driven adaptation from Myotis bat genomes International & fantastic collab. with @psudmant.bsky.social @denard.bsky.social Labs ! Major credit to the 2 leading scientists: Juan Vazquez & @lauterbur.bsky.social now with their own labs! You 2 rock! (1/n)
nature.com
Insights into longevity and virus-driven adaptation from Myotis bat genomes - Nature
Comparative and functional analyses of Myotis bats uncover unique patterns of adaptation in virus-interacting proteins and longevity-associated pathways, linking two hallmarks of bat biology.
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Alexandre delaigue @adelaigue.bsky.social · 27/08/2026
guillaumeallegre.substack.com/p/pourquoi-j...
guillaumeallegre.substack.com
Pourquoi j’ai quitté BlueSky
D’une certaine manière, le BlueSky d’aujourd’hui ressemble au Twitter de 2015, avant les algorithmes.
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