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UMR Génomique Métabolique

@genoscopeumr.bsky.social
94 followers 126 following 21 posts

Unit research of Genoscope (CEA, Univ Evry Paris Saclay, CNRS). Axes of research :  Environmental genomic & metagenomic  Exploration & exploitation of microorganism metabolism  Synthetic biology & xenobiology  Systems biology

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UMR Génomique Métabolique @genoscopeumr.bsky.social · 01/08/2025
📢#postdoc offer in Organic chemistry (2 years) in the Environmental chemistry team of Pierre-Loïc Saaidi Mission : Synthesis, Chemical modification, Degradation and Molecular recognition of #PersistentOrganicPollutants : #Chlordecone @cea.fr @univparissaclay.bsky.social @univevry.bsky.social
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 11/07/2025
#Joboffer #CNRS CPJ computational biology in our unit. Deadline for submitting your application is July 14. See details below. Come to join us! @univparissaclay.bsky.social @cea.fr @genopole.bsky.social
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LABGeM @genolabgem.bsky.social · 12/06/2025
Congratulations to @jpjarnoux.bsky.social who just achieved a major milestone by successfully defending his thesis! 🎓✨ Welcome to the world of doctors! #AcademicLife #ProudPI #pangenomics @genoscopeumr.bsky.social‬ @univparissaclay.bsky.social @cea.fr @univevry.bsky.social
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LABGeM @genolabgem.bsky.social · 12/06/2025
Thrilled to announce the successful defense of the Habilitation à Diriger des Recherches (HDR) by Violette Da Cunha! 🎉📚 Congratulations on this well-deserved achievement! #AcademicLife #Archaea @genoscopeumr.bsky.social‬ @univparissaclay.bsky.social @univevry.bsky.social
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LABGeM @genolabgem.bsky.social · 12/06/2025
We're on the lookout for a talented Software Development Engineer to join our team permanently at CEA and work on the MicroScope platform! 🚀💻 If you're passionate about software development and ready for a new challenge, we'd love to hear from you. @genoscopeumr.bsky.social‬ @cea.fr ‪
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 01/07/2025
🔔 New ERGA–@biogeneurope.bsky.social reference #genome for Dendarus foraminosus, a darkling beetle endemic to Crete 🇬🇷 🔗 Read the #GenomeReport: open-research-europe.ec.europa.eu/articles/5-173 #Crete #biodiversity #genomics #beetle #conservation @genoscopeumr.bsky.social @genolage.bsky.social
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 14/05/2025
📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities www.sfbi.fr/emplois/offr... @univparissaclay.bsky.social @cea.fr @genopole.bsky.social
sfbi.fr
CNRS Junior Professor Chair (CPJ) in computational biology | SFBI Société Française de Bioinformatique
Emploi en bioinformatique à Évry Tenure Track Autre
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 14/05/2025
📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities www.sfbi.fr/emplois/offr... Join us! @cnrsbiologie.bsky.social @univevry.bsky.social
sfbi.fr
CNRS Junior Professor Chair (CPJ) in computational biology | SFBI Société Française de Bioinformatique
Emploi en bioinformatique à Évry Tenure Track Autre
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 03/04/2025
🎉New sampling expedition of #ATLAsea with the implication of Caroline and Janaina from our labs #MarineBiodiversity
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 26/03/2025
📢#joboffer. #CDD #ingénieur en génie mécanique (12 mois) pour travailler au développement d'une plateforme pour l'évolution des micro-organismes. Expertise requise en fluidique et en automatisation matérielle pour concevoir des systèmes fluidiques précis. www.emploi.cea.fr/offre-de-emp...
emploi.cea.fr
CEA - CDD Ingénieur de recherche en génie mécanique H/F
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 18/03/2025
📢 #PhD and #postdoctoral positions available in Pedro Oliveira lab. We seek candidates for Microbial Genomic and Epigenetic teams to work on #epigenomics of #bacteria and #microbiomes. Start: Fall 2025. Please RT! @cea.fr @univparissaclay.bsky.social @genopole.bsky.social @upcite.bsky.social
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Ana Conesa @anaconesa.bsky.social · 25/02/2025
If you are or will work on Long-read transcriptomics, do not miss this comprehensive course organized by the @longtrec.bsky.social consortium. All what you need to know, from reads to biological insights!!! @pacbio.bsky.social @nanoporetech.com @iscb.bsky.social www.earlham.ac.uk/events/long-...
earlham.ac.uk
Long-reads Bioinformatics Summer School
A bioinformatics summer school on analysis of long-reads technology data, hosted by the Long-reads TRanscriptome European Consortium (LongTREC).
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 18/03/2025
📢Come to join us ! We are looking for a enthusiastic #phD in #bioinformatics using #LLM to work on #pangenomics in @genolabgem.bsky.social team. Fully funded phD Apply before April 27th. @univparissaclay.bsky.social @upcite.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
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LABGeM @genolabgem.bsky.social · 17/03/2025
We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise. labgem.genoscope.cns.fr/2025/03/17/f... Apply before April 27th. @genoscopeumr.bsky.social @cea-paris-saclay.bsky.social
Comparative pangenomics. Source LABGeM.
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 07/03/2025
#StandUpForScience2025 Nous exprimons notre inquiétude sur les libertés scientifiques et la désinformation organisée. Soutien solidaire au mouvement Stand Up For Science @univparissaclay.bsky.social @cnrsbiologie.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
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CNRS @cnrs.fr · 06/03/2025
#Communiqué 🗞️ Le CNRS exprime sa solidarité avec les scientifiques exerçant aux États-Unis, où la liberté académique est aujourd'hui mise à l’épreuve. 👉 www.cnrs.fr/fr/presse/le...
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Inserm @inserm.fr · 06/03/2025
L’Inserm est solidaire du mouvement Stand Up For Science presse.inserm.fr/cest-dans-la... #StandUpForScience2025
L’Inserm est très concerné par le sort de la science et des scientifiques aux Etats-Unis, ayant des relations étroites historiques avec de nombreuses institutions scientifiques américaines et en particulier le NIH et des programmes scientifiques communs.

Plus largement l’Inserm est solidaire du mouvement Stand Up For Science et est solidaire de tous les scientifiques exerçant aux États-Unis, où la liberté académique est aujourd’hui mise à l’épreuve.

L’Institut souhaite rappeler l’importance de la science et du progrès dans le monde actuel, où nous sommes confrontés à de nombreux enjeux de société et de nombreuses crises.
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IRD @ird-fr.bsky.social · 06/03/2025
L’IRD soutient le mouvement #StandUpForScience et l’ensemble de nos partenaires scientifiques dans le monde. Face aux grands défis mondiaux, la science a un rôle central pour le développement social, environnemental et économique des sociétés, et nécessite une coopération internationale renforcée.
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 03/03/2025
#Joboffer: CDD CEA TECH expérimenté/ING(10 mois, début mai) Mission : mise au point de tests enzymatiques en microplaques pour le criblage enzymatique (CAZymes) Expertises solides en biochimie et biologie moléculaire @univparissaclay.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 28/02/2025
🎉Congrats to Angélique D’Hont #CIRAD and #Genoscope teams. Comparative & phylogenetic analyses reveal an ongoing speciation process within Musa, characterised by large chromosome rearrangements and centromere differentiation. Read : rdcu.be/ebGRK @cea.fr @univevry.bsky.social @jm-aury.bsky.social
rdcu.be
Unravelling genomic drivers of speciation in Musa through genome assemblies of wild banana ancestors
Nature Communications - Hybridizations between different wild species and subspecies within Musa genus lead to the origin of current banana cultivars with different ploidy level and constitution....
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 25/02/2025
🧬📢 The functional adaptations highlighted in our last publication, help us to understand how extremophiles can respond to environmental changes and how ecosystems react to climate change. Read : doi.org/10.1093/isme... @ericpelletier.bsky.social @cea-paris-saclay.bsky.social @univevry.bsky.social
doi.org
Shotgun metagenomics reveals the flexibility and diversity of Arctic marine microbiomes
Abstract. Polar oceanographic regions are exposed to rapid changes in temperature, salinity, and light fields that determine microbial species distribution
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 24/02/2025
🏔️ New ERGA - @biogeneurope.bsky.social reference genome for Androsace saussurei: www.biorxiv.org/content/10.1... The #genome will shed light on plant adaptation to extreme alpine environments and the speciation of high-altitude "sky island" flora @osug-fr.bsky.social @genoscopeumr.bsky.social
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 17/02/2025
🎉😀🐠🧬Our teams are proud to be part of this huge and challenging adventure through the Genoscope sequencing platform and our researchers deeply involved ! Follow Patrick Wincker, Jean-Marc Aury (@jm-aury.bsky.social) and Pedro Oliveira teams @CNRS @cea-paris-saclay.bsky.social @univevry.bsky.social
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 17/02/2025
🎉See C versions of Arima Genomics mapping pipeline tools (htslib library). These tools are designed to efficiently process & analyze HTS sequencing data, particularly for Hi-C & other chromosome conformation capture experiments. github.com/Genoscope-LBGB/arima_htslib #bioinformatic #genomic #Hi-C
github.com
GitHub - Genoscope-LBGB/arima_htslib: Performance-critical parts of the Arima mapping pipeline written in C with htslib
Performance-critical parts of the Arima mapping pipeline written in C with htslib - Genoscope-LBGB/arima_htslib
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 17/02/2025
👍Congrats to L. Janniere, N. Sarica and B. Jester from #Synovance. Their model is suggesting that DNA looping is an important cause of context sensitivity and can be used for better controlling the transcription of engineered circuits. #syntheticbiology #AppliedMicrobiology www.mdpi.com/3171930
mdpi.com
Towards a Better Control of Engineered Circuit Transcription in Bacterial Genomes
The transcription of genes and engineered circuits can deeply vary when inserted into different genomic loci. This unpredictable performance, termed context sensitivity, complicates strain development...
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 13/02/2025
🌞 New Publication from Valérie Pezo "Cys-tRNAj, a 2nd Translation Initiator for Priming Proteins with Cys in Bacteria". Optimized tRNAj to recode the priming of an arbitrary subset of proteins with absolute control of their expression. #xenobiology #syntheticbiology DOI: 10.1021/acsomega.4c08326
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 13/02/2025
Proud of Alaksh Choudhury, #ATIGE funding program from Genopole since 1 year. He presents his work at Genopole Research Day on "High throughout navigation of regulatory sequence space and it’s application in strain engineering" #syntheticbiology @genopole.bsky.social @univevry.bsky.social @cea.fr
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 13/02/2025
Andrew Tolonen, Fermentation team leader in our Unit, is chairman today of Bioproduction session at Genopole Research Day. He has received ATIGE funding from Genopole® for 3 years to consolidate his team #syntheticbiology #fermentation @genopole.bsky.social @univevry.bsky.social @cea.fr
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 13/02/2025
PEPR ATLASea an exciting and challenging project that will embark our researchers and the Genoscope sequencing platforms into unexplored genomic landscapes for years !! ATLASea is leaded by Patrick Wincker (CEA) and Hugues Roest Crollius (CNRS) @atlasea.bsky.social @cea.fr
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UMR Génomique Métabolique @genoscopeumr.bsky.social · 13/02/2025
👍 Congrats to Andrew Tolonen team for their review on Lachnospiraceae, a family of anaerobic bacteria in the class Clostridia with potential to advance the bio-economy and intestinal therapeutics. 10.3389/fbioe.2023.1324396 @univevry.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social
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