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foundingGIDE

@gideproject.bsky.social
202 followers 35 following 24 posts

Enabling biological and biomedical image data sharing by reaching consensus together with the global imaging community on metadata harmonization and ontology use

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Tiago Lubiana @tiagolubiana.bsky.social · 05/05/2026
what a panel! closing session for today at @gideproject.bsky.social with diverse voices on the global community efforts for bio data sharing #GIDE2026
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Image Cooperative @image.coop · 06/05/2026
Member Eric Perlman takes the stage at @embl.org to announce our launch as an international worker co-op for #OSS scientific imaging software. First task supported by @biohub.org is accelerating #OMEZarr towards a 1.0 alpha early 2027. Stay tuned! image.coop #GIDE2026 @gideproject.bsky.social
A screenshot of Eric's title slide, saying "The role of COOPeration in global imaging. Eric Perlman. Member, Image Cooperative" in Atkinson Hyperlegible font in black on white. The footer is a subtle pink-to-green bar with the hexagonal ball as a separator. The text in the footer says "Image Cooperative Ltd."A photo of Eric behind the mic at EMBL with the first slide as described in the other image being shown by the projector.
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Tiago Lubiana @tiagolubiana.bsky.social · 06/05/2026
Linda Chaabane in the name of @eurobioimaging.bsky.social introducing the last session of the @gideproject.bsky.social plenaries! An absolutely fantastic project & event
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 19/05/2026
🙌 Help us understand what #metadata is needed to make #preclinical #imagingdata FAIR! Thanks to your feedback, we will support the development of PRISM - a metadata model for sharing Preclinical Imaging Datasets. @gideproject.bsky.social ⏱️ 20 minutes 🗓️ May 31 www.eurobioimaging.eu/news/collabo...
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foundingGIDE @gideproject.bsky.social · 27/02/2026
A significant step forward in standardizing biological imaging data. Our project partners, @gerbi-gmb.de and @bioimagearchive.bsky.social, will assure the continued development of the #FBbi ontology. Discuss this milestone and many other at our Community Event 4-6 May! tinyurl.com/26rbksyx
tinyurl.com
A Milestone for Global Image Data Interoperability - FoundingGIDE
The FBbi ontology has been migrated to a dedicated repository at https://github.com/foundingGIDE/fbbi, where new releases will be made available. To ensure the ontology remains community-driven, GerBI...
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 26/02/2026
Delighted to be at the #EESCollectivity event this week to exchange with the research community about behaviour of complex living systems. #EVOLVEproject Thanks @events.embl.org for this opportunity!
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foundingGIDE @gideproject.bsky.social · 11/02/2026
📢 Call for Posters: #foundingGIDE Community Event 2026 Join us in #Heidelberg to shape the future of #imaging. We are now accepting poster abstracts! 📍 Note: The poster session is in-person only on 4th of May while the community event is #hybrid 🔗 Details: tinyurl.com/28mjsn9z
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 10/02/2026
Curious about Positron emission tomography (PET)? Check out the course from the Turku PET Centre, part of our @FibiNode to learn basic principles & research applications. Course is free, takes place online & in person Register by 🗓️ March 17🔽 www.eurobioimaging.eu/events/pet-b...
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foundingGIDE @gideproject.bsky.social · 03/02/2026
Registration is now OPEN! Join us in Heidelberg 🇩🇪 to shape the future of the Global Image Data Ecosystem 🌏 #foundingGIDE will have its final community event from 4–6 May 2026 in Heidelberg, Germany, followed by a two-day hackathon and workshops on 7-8 May. Register at: tinyurl.com/GIDE2026
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foundingGIDE @gideproject.bsky.social · 12/01/2026
🎉 #foundingGIDE turns 2! We’ve been building a Global Image Data Ecosystem, advancing interoperability across biological & preclinical imaging, for the past two years tinyurl.com/4a8fad6v 🔔 What’s next? 🗓️ 4–8 May 2026 foundingGIDE Community Event 👉 Register interest: tinyurl.com/28mjsn9z
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Beth Cimini 🔬💻📊 @bethcimini.bsky.social · 23/09/2025
Halfway to I2K is BACK, friends of all kinds! Last year, 650 people attended 30+ TOTALLY FREE image analysis workshops of all kinds, across many timezones. If you make image analysis software and want to teach it, workshop submissions are open now! We'd love to have your tool highlighted.
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foundingGIDE @gideproject.bsky.social · 26/09/2025
📢 #foundingGIDE will join @researchdataall.bsky.social session at international data week #IDW2025! We’ll discuss practices&standards for integrating multi-modal life science data, including imaging, together with @embl.org, @eurobioimaging.bsky.social, @instruct-eric.bsky.social as part of #EOSC
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foundingGIDE @gideproject.bsky.social · 23/09/2025
We're proud to have @aarnet.edu.au (Australia's Academic and Research Network) as a silver #sponsor of the #foundingGIDE Community Event 2025 in Brisbane 🇦🇺 , supporting connectivity and collaboration across Australia's research and education sectors. #imaging #microscopy #standardization #metadata
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foundingGIDE @gideproject.bsky.social · 22/09/2025
We are proud to announce that the QCIF Ltd joins is supporting the #foundingGIDE Community Event 2025 in Brisbane 🇦🇺 as a silver sponsor, bringing expertise in data, digital infrastructure and training to help accelerate discoveries in imaging and beyond. www.qcif.edu.au #imaging #data #microscopy
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foundingGIDE @gideproject.bsky.social · 22/09/2025
If you’re a researcher, data steward, developer, or imaging leader, the #foundingGIDE Community Event 2025 is designed for you. Join us in Brisbane (or Online) in October to add your expertise and shape the future of imaging data. #imaging #microscopy #standardization #metadata #ontology
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foundingGIDE @gideproject.bsky.social · 02/09/2025
Continuing our #foundingGIDE Community Event speaker lineup reveal, we are thrilled to welcome Joe Shapter from The University of Queensland, Australia 📅 Join us in person or Online: 🔗 founding-gide.eurobioimaging.eu/community-ev... #imaging #bioimaging #microscopy #metadata #ontology #community
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 26/08/2025
As #EuroBioImaging, we’re glad to share the program for the upcoming @gideproject.bsky.social Community Event 2025!🎉 It will bring the imaging community to collaborate & address the standardisation challenge in biological & preclinical #imagingdata. 🔗:
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GIDE2025_PublicProgram.docx
Day 1 17th of October 2025 08:00 - 09:00 Registration 09:00 - 09:05 Acknowledgement of Country Session 1 Towards Shared Solutions 09:05 - 09:25 Lisa Yen and Wojtek Goscinski National Imaging…
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foundingGIDE @gideproject.bsky.social · 28/08/2025
Kicking off our speaker series is Tomomi Shimogori from the #RIKEN Center for Brain Science, Japan, sharing insights on how the Marmoset Brain Atlas is shaping global neuroscience. Join us in person or online on 17-18th of October at 🔗 founding-gide.eurobioimaging.eu/community-ev...
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foundingGIDE @gideproject.bsky.social · 27/08/2025
📢 Deadline Extended! We’re excited to announce that the registration deadline for in-person attendance at the #foundingGIDE Community Event has been extended. 🗓️ New deadline: 30 September 2025 (previously 31 August 2025)
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foundingGIDE @gideproject.bsky.social · 25/08/2025
The #foundingGIDE Community Event 2025 program is now live! 📌 Location: Brisbane, Australia & Online 📅 Deadline: 31st August 📃 Program: docs.google.com/document/d/1... @globalbioimaging.bsky.social @nifaustralia.bsky.social @micro-au.bsky.social @eurobioimaging.bsky.social #imaging #bioimaging
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foundingGIDE @gideproject.bsky.social · 21/05/2025
📢 Registration is now OPEN for the foundingGIDE Community Event 2025 in Brisbane 🇦🇺 Join us Oct 17–18 for 1.5 days on imaging data! Theme: Imaging Data Ecosystem: Towards Shared Solutions Abstracts and registration: founding-gide.eurobioimaging.eu/community-ev...
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 01/07/2025
🚀 2024 was a defining year for #EuroBioImaging, marked by expansion, collaboration & successful evaluation. Read all about it in our #AnnualReport2024. 🔗PDF: www.eurobioimaging.eu/annualreport2024/ 📖 Flip book: www.calameo.com/read/0067706...
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The BioImage Archive @bioimagearchive.bsky.social · 02/07/2025
We are at #mmc2025! Come to our booth to say hi and learn about the Data Steward Training Program 👋
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foundingGIDE @gideproject.bsky.social · 30/06/2025
📣 Deadline extended! Submit your abstract to present at the foundingGIDE Community Event 2025 in 🇦🇺 and help us build an interoperable 🌏 #imaging data ecosystem New Deadline: 18 July Organized by @nifaustralia.bsky.social @micro-au.bsky.social and @eurobioimaging.bsky.social 🔗 tinyurl.com/7jnceueu
founding-gide.eurobioimaging.eu
foundingGIDE Community Event 2025 - FoundingGIDE
Location: Brisbane, Australia | HybridVenue: Brisbane Convention and Exhibition Center | HybridDate: 17-18 October 2025Theme: Imaging Data Ecosystem: Towards Shared SolutionsRegistration deadline for ...
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 25/06/2025
How is #foundingGIDE advancing in interoperability for bio & preclinical image data resources? At #ImageData Community Days, @gideproject.bsky.social shared ongoing efforts and key topics, including persistent identifiers for FAIR data. 🎥Watch the sessions here: www.youtube.com/watch?v=qILz...
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RIKEN Center for Biosystems Dynamics Research (BDR) @riken-bdr.bsky.social · 09/06/2025
📣RIKEN BDR Lab for Developmental Dynamics is hosting the #GloBIAS‬ #‬BioimageAnalysis Conference to be held in Kobe, Japan, Oct 26-31, 2025. Training school, #Hackathon & #Taggathon are also being organized! ⌛Registration deadline: Jun 15, 2025 👇 globias.org/activities/b... @globias.bsky.social
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German BioImaging @gerbi-gmb.de · 03/06/2025
🚨 We’re hiring TWO new colleagues! 🧠 Structured Metadata Expert – Design data models, standards & annotations for #OMEZarr 🌐 Web Developer / Prototyper – Build interactive tools & demos for the community Both fully remote. Both open science. 🔗 gerbi-gmb.de/resources/ca... #RSE #OpenScience
gerbi-gmb.de
Career - German BioImaging
Job offers Feel free to contact us, if you want to publish your job offer here. Project Coordinator (m/f/d, 50-100%, fully remote) at GerBI-GMB e.V. June 2025 We are looking
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foundingGIDE @gideproject.bsky.social · 10/06/2025
#ELMI2025 represents 25y of bringing the light microscopy community together! Key themes: #metadata, #OMEZarr, data platforms, #FAIR RDM and core facility challenges. Great to see #metadata spotlight! Join us in Brisbane for the #foundingGIDE Community Event to continue the metadata discussion!
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foundingGIDE @gideproject.bsky.social · 04/06/2025
Want to hear more about open science and imaging data? you’ll want to know what @gideproject.bsky.social is up to! Let’s connect at #ELMI2025 🧫🤝
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Global BioImaging @globalbioimaging.bsky.social · 20/05/2025
🎉 Registration is OPEN for GBIxBINA2025! Join us Oct 6–10 in Montreal for a unique hybrid event exploring the future of bioimaging. From infrastructures to innovation — we’ll shape where imaging will be in 10 years. 📅 buff.ly/YvZeNX3 @bioimagingna.bsky.social‬, ‪@canadabioimaging.bsky.social
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Exchange of Experience 2025 | Global BioImaging
Join Us At: Imaging in 2035 - Sustaining Infrastructure Ecosystems and Advanced Technologies October 6-10, 2025 | Hybrid Event | Montreal, Canada Be part of th…
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German National Research Data Infrastructure (NFDI) @nfdi.de · 21/05/2025
We invite you to our next #NFDITalk about "Cloud based image data science". 🗓️ 2 June, 4 PM – Online 🎤 Speakers: Josh Moore and Yi Sun #NFDI4BIOIMAGE ➡ Join the Zoom Meeting: www.nfdi.de/talks ➡ YouTube stream: www.youtube.com/live/bzfmE29... #NFDI #fdm #rdm #datascience #forschungsdaten
youtube.com
NFDITalk (2 June 2025): Cloud based image data science
In our NFDITalks, scientists from different disciplines present exciting topics around NFDI and research data management. In this episode, Josh Moore and Yi Sun (NFDI4BIOIMAGE) will talk about "Cloud ...
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foundingGIDE @gideproject.bsky.social · 21/05/2025
📢 Registration is now OPEN for the foundingGIDE Community Event 2025 in Brisbane 🇦🇺 Join us Oct 17–18 for 1.5 days on imaging data! Theme: Imaging Data Ecosystem: Towards Shared Solutions Abstracts and registration: founding-gide.eurobioimaging.eu/community-ev...
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foundingGIDE @gideproject.bsky.social · 11/04/2025
Join on April 23rd the @globalbioimaging.bsky.social for a Workshop on Biomedical Image Data Practices to discuss challenges and share solutions around: 🔹 Imaging data repositories 🔹 Interoperability 🔹 Preclinical&clinical imaging infrastructure 🔗 Find out more: globalbioimaging.org/working-grou...
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foundingGIDE @gideproject.bsky.social · 10/04/2025
We agree 💯 with this takeaway. It was great to be part of #EuroBioImaging Image Data Community Days #ImagingCommunity
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foundingGIDE @gideproject.bsky.social · 07/04/2025
@eurobioimaging.bsky.social Data Days are ON 🔊 Join us for a dedicated #foundingGIDE session on Tuesday April 8, from 9:00 to 11:00 CET featuring insightful talks from global experts on various aspects of biological and preclinical data #interoperability www.eurobioimaging.eu/our-events/i...
eurobioimaging.eu
Image Data Community Days
Euro-BioImaging is proud to announce that we will be hosting the first Euro-BioImaging Image Data Community Days during the week of 7-11 April 2025. This week-long free online event will bring…
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 20/02/2025
Are you a student 🧑‍🎓 , group leader 🧑‍🔬 , data manager or imaging facility staff🔬 interested in #imagedata? Join the #EuroBioImaging Image Data Community Days, a FREE, online event taking place from 🗓️ April 7-11 to explore advancements in the field of image data. More 🔽 buff.ly/3CHd9uf
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Claire Brown @clairebrown514.bsky.social · 11/02/2025
Happy International Day of Women and Girls in Science. @bioimagingna.bsky.social @bioimaginguk.bsky.social @globalbioimaging.bsky.social @globias.bsky.social @gideproject.bsky.social @chanzuckerberg.bsky.social
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 10/02/2025
🙌We will host the #EuroBioImaging Image Data Community Days 🗓️7-11 April 2025. This FREE online event brings together Euro-BioImaging Node staff, researchers & other experts to explore and discuss the latest advancements in the field of image data. Full info ⤵️ www.eurobioimaging.eu/our-eve…
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 05/02/2025
🙌We will host the #EuroBioImaging Image Data Community Days 🗓️7-11 April 2025. This FREE online event brings together Euro-BioImaging Node staff, researchers & other experts to explore and discuss the latest advancements in the field of image data. Full info ⤵️ www.eurobioimaging.eu/our-events/i...
eurobioimaging.eu
Image Data Community Days
Euro-BioImaging is proud to announce that we will be hosting the first Euro-BioImaging Image Data Community Days during the week of 7-11 April 2025. This week-long free online event will bring…
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foundingGIDE @gideproject.bsky.social · 03/02/2025
Deniz Saltukoglu from @globalbioimaging.bsky.social, a key #foundingGIDE partner, will spotlight the project at #APMC13 & the foundingGIDE Community Event (Oct 17-18, 2025 in Brisbane)! Join the conversation on #interoperability and visit @globalbioimaging.bsky.social at booth 72!
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Global BioImaging @globalbioimaging.bsky.social · 02/02/2025
If you're attending the Asia Pacific Microscopy Congress (#APMC13) in Brisbane, Australia from 2–7 February, visit our Global BioImaging & Microscopy Australia joint booth! 🔍 Ask us about our programs designed to support imaging scientists globally and 🎉 pick up some fun science stickers!
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GloBIAS @globias.bsky.social · 03/02/2025
Bioimage analysis professionals: join us in-person for a workshop at ISTA in Klosterneuburg, Austria, April 7–8, 2025. A workshop to adapt and expand the current Data Carpentries image processing curriculum. Information & registration: tinyurl.com/3twkax2k
tinyurl.com
Update the Data Carpentries Bioimage Analysis with Python Curriculum
Data Carpentries BioImage Analysis - update with a Python Curriculum Join us to update the Data Carpentries Bioimage Analysis Curriculum with a Python Curriculum! We’re inviting bioimage analysis prof...
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foundingGIDE @gideproject.bsky.social · 30/01/2025
Image data is one of the fastest growing outputs of biological research. Watch the video to learn more about how #foundingGIDE is working towards standardizing #metadata and #ontologies to enhance the #interoperability of image data www.youtube.com/watch?v=IX8P...
youtube.com
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Global BioImaging @globalbioimaging.bsky.social · 30/01/2025
Travel grant applications for our annual EoE conference are open! 🎉 This year's event, hosted by @bioimagingna.bsky.social and CBI, takes place in Montreal, Canada, on October 6-10! 🍁 Explore the future of imaging science with us --> event details: buff.ly/4hBBXCF
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AI4Life @ai4life.bsky.social · 28/01/2025
🚨 Save the Date! 🚨 AI4Life & @globias.bsky.social are hosting a 4-part webinar series to showcase AI4Life services and lessons learned. 📅 When: Feb 13, Apr 10, Jun 12, Aug 14 🖥️ How: Online | 🎥 Recorded 🔗 Registration: bit.ly/registration...
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GloBIAS @globias.bsky.social · 29/01/2025
Don't miss this webinar series by AI4Life and GloBIAS!
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eurobioimaging.bsky.social @eurobioimaging.bsky.social · 29/01/2025
#EuroBioImaging and ELIXIR, the European life science data infrastructure, have renewed their strategic collaboration 🤝 in Brussels this week. Learn more about what this means for our organisations & our communities🔽 buff.ly/42zGfX1
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Microscopy Australia @micro-au.bsky.social · 30/01/2025
Are you planning your lectures/course content for this year? Check out MyScope – our free #microscopy training website with theory, quizzes and microscope simulators 🧪 Developed by our experts, open to the global community: www.myscope.training #openlearning
A picture showing the different modules available on MyScope, these include: Microscopy Concepts,  Scanning Electron Microscopy, Transmission Electron Microscopy, Light & Fluorescence Microscopy, Cryo-Electron Microscopy, X-ray Diffraction, Energy Dispersive Spectroscopy, Atom Probe Tomography, Focused Ion Beam, Scanning Probe & Atomic Force Microscopy, Secondary Ion Mass Spectrometry, Research Data Management, Work Health and Safety
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Microscopy Australia @micro-au.bsky.social · 21/01/2025
Travel grants are now open for the @globalbioimaging.bsky.social Exchange of Experience – a fantastic opportunity for imaging scientists to share knowledge and develop solutions to common challenges – made possible by @chanzuckerberg.bsky.social globalbioimaging.org/exchange-of-...
Image says: Imaging in 2035: Sustaining Infrastructure Ecosystems & Advanced Technologies
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foundingGIDE @gideproject.bsky.social · 20/01/2025
#foundingGIDE celebrates one year! We’re excited to share the highlights from one of our biggest events of 2024: the foundingGIDE Community Event in Okazaki, Japan 🇯🇵 www.youtube.com/watch?v=lIju... More of foundingGIDE Community Event 2025 here: founding-gide.eurobioimaging.eu/community-ev...
youtube.com
foundingGIDE Community Event 2024 - Highlights
YouTube video by Euro-BioImaging Communication
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