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Ryan Dhindsa

@ryandhindsa.bsky.social
347 followers 286 following 10 posts

Assistant Professor at Baylor College of Medicine & Texas Children's Hospital | Human genetics and single-cell genomics | Formerly Columbia Med & Duke

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Reposted by Ryan Dhindsa
Norn Group @norngroup.bsky.social · 02/04/2026
Finding actionable drug targets is a primary bottleneck in human longevity research. Through Impetus Grants, we’ve been funding researchers like Ryan Dhindsa @ryandhindsa.bsky.social from the Baylor College of Medicine @bcmhouston.bsky.social to make progress in exactly that 👇
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Ryan Dhindsa @ryandhindsa.bsky.social · 12/03/2026
Last December, @wired.com published a provocative article arguing that Parkinson's disease is driven by environmental chemicals, not genetics, and that decades of genetics research have been a dead end. I wrote about why that framing is patently wrong, and why it matters now more than ever.
thecausalgene.substack.com
Parkinson's disease does not pick sides
How pitting genetics against epidemiology threatens progress in Parkinson's research
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Reposted by Ryan Dhindsa
Thomas Norman @normanlab.bsky.social · 04/02/2026
My lab at MSKCC in New York is hiring for two positions. Join us at the frontier of functional genomics, studying fibroblast state transitions, combinatorial genetics, and ECM in disease. Please share with anyone who might be a good fit! (Mustache not required.)
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From the Labs at Baylor College of Medicine @bcmfromthelabs.bsky.social · 03/02/2026
#GeneticVariation influences how #EBV is controlled, and poorer viral control is linked with several long-term illnesses. @ryandhindsa.bsky.social @bcmhouston.bsky.social @caleblareau.bsky.social @mskcancercenter.bsky.social @astra-zeneca.bsky.social @nature.com blogs.bcm.edu/2026/02/03/f...
blogs.bcm.edu
These 22 genes could put people at risk of long-term health conditions following common viral infection.
Differences in these genes help explain why Epstein-Barr Virus can have lasting health effects in some people but not others.
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Ryan Dhindsa @ryandhindsa.bsky.social · 28/01/2026
This was a fun and rewarding collaboration! A great example of extracting biological signal from data hiding in plain sight
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From the Labs at Baylor College of Medicine @bcmfromthelabs.bsky.social · 28/01/2026
Baylor College of Medicine @bcmhouston.bsky.social, @astra-zeneca.bsky.social, @mskcancercenter.bsky.social identified genes that increase the risk of developing chronic conditions after #viralInfection. #EBV @nature.com @ryandhindsa.bsky.social #DuncanNRI #TexasChildrens www.bcm.edu/news/dna-res...
bcm.edu
DNA research uncovers 22 genes that could put people at risk of long-term health conditions following common viral infection
Baylor College of Medicine researchers are part of a collaborative research group with AstraZeneca and Memorial Sloan Kettering Cancer Center that have...
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Caleb Lareau @caleblareau.bsky.social · 28/01/2026
EBV infection is a major detriment to human health. @ryandhindsa.bsky.social, Slavé, and I discussed the impact of this work with @bloomberg.com and some future outlooks www.bloomberg.com/news/article...
bloomberg.com
Scientists Inch Closer to Solving the ‘Kissing Disease’ Mystery
Scientists have identified 22 genes that increase the risk of conditions like lupus, stroke, and rheumatoid arthritis in patients who’ve caught the virus behind mono, an illness known as the “kissing ...
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Greg Findlay @gregfindlay.bsky.social · 24/01/2026
Our latest story is now on bioRxiv. We present PETRA, a new method for deciphering how sequence variants impact gene regulation at scale. www.biorxiv.org/content/10.1... This work was led by Magdalena Armas Reyes, a @crick.ac.uk PhD student until very recently. Congrats, Dr. Armas! 🧵 1/9
biorxiv.org
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Thomas Norman @normanlab.bsky.social · 20/01/2026
New preprint on technologies to scale up CRISPR screens. We use them to map 665,856 pairwise genetic perturbations and outline a path to comprehensive interaction mapping in human cells. We also introduce an approach for cloning lentiviral libraries with billions of elements.
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Jonathan Pritchard @jkpritch.bsky.social · 13/12/2025
Our latest preprint revisits the classic model of mutation-selection balance. Do human recessive genes fit Haldane's 100-year old model? This work is by the wonderful @jonj-udd.bsky.social, and co-mentored by @jeffspence.github.io www.biorxiv.org/content/10.6...
biorxiv.org
Allele Frequencies at Recessive Disease Genes are Mainly Determined by Pleiotropic Effects in Heterozygotes
The classic theory of mutation-selection balance predicts the equilibrium frequency of genetic variation under negative selection. The model predicts a simple relationship between the total frequency ...
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Aaron Quinlan (he/him) @aaronquinlan.bsky.social · 02/12/2025
We are thrilled to announce the first official release (v0.1.8) of #𝗯𝗲𝗱𝗱𝗲𝗿, the successor to one of our flagship tool, #𝗯𝗲𝗱𝘁𝗼𝗼𝗹𝘀! Based on ideas we conceived of long ago (!), this was achieved thanks to the dedication of Brent Pedersen. 1/n
quinlanlab.org
Intro to Bedder – The Quinlan Lab
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Fritz Sedlazeck @sedlazeck.bsky.social · 10/11/2025
plsRT: Looking for a motivated postdoc! Join us at @bcmhgsc.bsky.social to explore the mosaic & somatic landscape of the human genome: structural variants, methylation, and all things @smahtnetwrk.bsky.social If you like long reads, complex variants & methylation come talk to me!
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Nick Page @nicholaspage.bsky.social · 06/11/2025
🚀 Very excited to share the first major work from my PhD!! We combined MPRA and CRISPRa in excitatory neurons to test and validate cis-regulation therapies for hundreds of haploinsufficient neurodevelopmental disorder genes. 🧬🔬 www.biorxiv.org/content/10.1...
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BK. Titanji @boghuma.bsky.social · 06/10/2025
A new Nature Medicine study analyzing health records from >100 million people in the US offers compelling evidence that reactivation of varicella-zoster virus (VZV) ,the same virus that causes chickenpox and shingles may contribute to dementia risk. www.nature.com/articles/s41...
nature.com
Varicella-zoster virus reactivation and the risk of dementia - Nature Medicine
Large-scale longitudinal health records reveal consistent association of varicella-zoster virus reactivation with dementia.
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Victor Tatarskiy @greenrat.bsky.social · 02/10/2025
Neat trick if you polycolonal ab's suck. Incubate them with fixed cells with a KO of your protein of interest, then spin. Protocol here: www.med.upenn.edu/markslab/ass... I was amazed how well it worked on first try (I'm sure that I can completely eliminate unspecific bands) #WesternBlot #cellsky
On the left - western blot of B16F10 cells wt and KO for CDK8. Our in house produced antibodies give a lot of unspecific bands. On the right same probes with antibodies preincubated with fixed CDK8 KO cells - there is a specific band and faint unspecific bands, which can be probably eliminated with increase of amount of KO cells.
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Nature @nature.com · 04/10/2025
Stem-cell models provide evidence that viral DNA sequences that entered the human genome in the past were repurposed to aid early stages of embryonic development go.nature.com/4nRJyA4
go.nature.com
Ancient viral DNA in the human genome shapes early development
Stem-cell models provide evidence that viral DNA sequences that entered the human genome in the past were repurposed to aid early stages of embryonic development.
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Reposted by Ryan Dhindsa
Greg Findlay @gregfindlay.bsky.social · 18/08/2025
Our latest research is out today on ‪@medrxivpreprint.bsky.social: www.medrxiv.org/content/10.1... Saturation genome editing of BRCA1 across cell types accurately resolves cancer risk. Led by the amazing Phoebe Dace. This one’s packed full of data, so check out the paper. Quick highlights… 🧵 1/n
medrxiv.org
Saturation genome editing of BRCA1 across cell types accurately resolves cancer risk
Germline pathogenic BRCA1 variants predispose women to breast and ovarian cancer. Despite accumulation of functional evidence for variants in BRCA1 , over half of reported single-nucleotide variants (...
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Nature @nature.com · 06/08/2025
Nature research paper: Whole-genome sequencing of 490,640 UK Biobank participants go.nature.com/46EtTyW
go.nature.com
Whole-genome sequencing of 490,640 UK Biobank participants - Nature
A study reports whole-genome sequences for 490,640 participants from the UK Biobank and combines these data with phenotypic data to provide new insights into the relationship between human variation and sequence variation.
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Caleb Lareau @caleblareau.bsky.social · 22/07/2025
Excited to share a new preprint from the lab with @ryandhindsa.bsky.social ! www.biorxiv.org/content/10.1... Led by @sherrynyeo.bsky.social, @erinmayc.bsky.social, and friends, we continue our journey to find viral DNA in our favorite place-- the overlooked and discarded reads in existing data! 1/
the treasure trove of all sequencing datasets
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Camp Lab @graycamplab.bsky.social · 11/07/2025
Neuron programming! Pro-neural TFs + 480 morphogen conditions + scRNA-seq --> Diverse iN subtypes of forebrain, midbrain, hindbrain, spinal cord, and PNS. @hsiuchuanlin.bsky.social‬ @jasperjanssens.bsky.social‬ and Treutlein Lab! @science.org www.science.org/doi/10.1126/... #NGN2 #ASCL1
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Daniel Brock @danielbrock.bsky.social · 07/05/2025
Drop by poster B0008 today to learn about genetic risk factors for retinal detachment! We found that variants in VSX2 were associated with an increased risk of retinal detachment in the UK Biobank. Shout out to my PIs Ben Frankfort and @ryandhindsa.bsky.social! @arvoinfo.bsky.social #visionscience
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Patricia Nano @prnano9.bsky.social · 02/05/2025
It’s out! The first paper from my postdoc – and first from the @bhadurilab.bsky.social – is now live @natneuro.nature.com . 🧠✨ Using a new meta-atlas generation strategy, we identified functional gene networks that more fully explain how cell types are formed in the human cortex. (1/13)
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John Butts @j-c-butts.bsky.social · 23/04/2025
Excited to share our MPAC preprint, a scalable ensemble of ML models for genome-wide non-coding variant effect prediction and our findings from 575M predictions across databases including @ukbiobank.bsky.social, GTEx, ClinVar, COSMIC, and @gnomad-project.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
| bioRxiv
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
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Ryan Dhindsa @ryandhindsa.bsky.social · 09/04/2025
🚨 We’re hiring postdocs! Join our lab in Houston to study human disease using stem cell models, functional genomics, and big genomic data. Wet & dry lab backgrounds welcome. Please email me if you're interested (ryan.dhindsa@bcm.edu) or apply directly: jobs.bcm.edu/job/Postdoct... 📩
jobs.bcm.edu
Postdoctoral Associate- Human Genetics
Postdoctoral Associate- Human Genetics
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Ryan Dhindsa @ryandhindsa.bsky.social · 31/03/2025
Excited to share our latest study published in @naturecomms.bsky.social! We demonstrate that broad ancestral representation dramatically improves our ability to detect disease-associated regions of the genome. Outstanding work was led by @alexander-han.bsky.social www.nature.com/articles/s41...
nature.com
Diverse ancestral representation improves genetic intolerance metrics - Nature Communications
Here the authors show that expanding global ancestry diversity in genomic datasets improves detection of genomic regions intolerant to variation, identifying areas more likely to harbor disease-causin...
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Ryan Dhindsa @ryandhindsa.bsky.social · 07/03/2025
Our paper describing ITSN1 as a novel risk gene for Parkinson’s disease was published in @cp-cellreports.bsky.social today! We found that rare loss-of-function variants in ITSN1 increase Parkinson's disease risk by 10-fold www.cell.com/cell-reports...
cell.com
Haploinsufficiency of ITSN1 is associated with a substantial increased risk of Parkinson’s disease
Spargo et al. analyzed whole-genome sequence data from ∼900,000 individuals and found that protein-truncating variants in ITSN1 confer a ∼10-fold increased risk of Parkinson’s disease. Functional stud...
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From the Labs at Baylor College of Medicine @bcmfromthelabs.bsky.social · 07/03/2025
Dr. @ryandhindsa.bsky.social et al linked variants in the gene #ITSN1 to a significantly elevated risk of #ParkinsonsDisease, paving a new way for treatments. @cellpress.bsky.social @bcmhouston.bsky.social #DuncanNRI @astrazeneca.bsky.social www.bcm.edu/news/itsn1-g...
bcm.edu
ITSN1 gene linked to risk of Parkinson’s disease
A new study published in Cell Reports reveals a breakthrough discovery linking genetic variants in the gene ITSN1 to a significantly elevated risk of Parkinson’s...
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Cell - a Cell Press journal @cp-cell.bsky.social · 01/03/2025
Now online! Safeguarding the future of biomedical science in the United States
dlvr.it
Safeguarding the future of biomedical science in the United States
NIH’s abrupt decision to cap indirect cost reimbursement at 15% threatens the critical infrastructure supporting groundbreaking biomedical research in the United States. This policy jeopardizes America’s global leadership in science and medicine. Urgent…
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Leandros Boukas @leandrosboukas.bsky.social · 27/02/2025
I'm very happy to share our latest work with Seth Berger and the UCI-GREGoR team. Using long-read sequencing, we can detect de novo variants *without* sequencing both parents. We call our method duoNovo. preprint: www.medrxiv.org/content/10.1... R package: github.com/sbergercnmc/... (1/n)
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Colette Delawalla, PhD @cdelawalla.bsky.social · 27/02/2025
We have 8 days and we need to raise at LEAST $60,000 for a successful #StandUpforScience2025 These funds will go to: the DC rally, covering costs of local rally sites (e.g., insurance!), and setting up @standupforscience.bsky.social for March 8th and beyond! Our work only begins on March 7th!
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Ryan Dhindsa @ryandhindsa.bsky.social · 26/02/2025
Had a lot of fun teaming up with my younger brother and collaborators @bcmfromthelabs.bsky.social and @astrazeneca.bsky.social on this paper! We trained ML models that predict genes linked to dominant and recessive neurodevelopmental disorders @ajhgnews.bsky.social www.cell.com/ajhg/abstrac...
cell.com
Genome-wide prediction of dominant and recessive neurodevelopmental disorder-associated genes
Thousands of neurodevelopmental disorder (NDD)-associated genes remain undiscovered, limiting genetic diagnoses. Here, we employ inheritance-specific machine learning models, incorporating gene expres...
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From the Labs at Baylor College of Medicine @bcmfromthelabs.bsky.social · 26/02/2025
#AI approach accelerates the identification of #genes contributing to neurodevelopmental conditions such as #autismSpectrumDisorder, #epilepsy & #developmentalDelay. @ryandhindsa.bsky.social awzoghbi et al. #AJHG @bcmhouston.bsky.social @bcmgenetics.bsky.social #DuncanNRI www.bcm.edu/news/ai-acce...
bcm.edu
AI accelerates discovery of neurodevelopmental disorder-associated genes
Researchers have developed an artificial intelligence (AI) approach that accelerates the identification of genes that contribute to neurodevelopmental...
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The American Journal of Human Genetics @ajhgnews.bsky.social · 26/02/2025
📣 New from @ryandhindsa.bsky.social & co! 📄Genome-wide prediction of dominant and recessive neurodevelopmental disorder-associated genes
cell.com
Genome-wide prediction of dominant and recessive neurodevelopmental disorder-associated genes
Thousands of neurodevelopmental disorder (NDD)-associated genes remain undiscovered, limiting genetic diagnoses. Here, we employ inheritance-specific machine learning models, incorporating gene expres...
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Ryan Dhindsa @ryandhindsa.bsky.social · 13/11/2024
Excited to share our latest pre-print, in which we show that greater genetic diversity, rather than sample size alone, improving the accuracy of genetic intolerance metrics www.biorxiv.org/content/10.1...
biorxiv.org
Diverse ancestral representation improves genetic intolerance metrics
Rapidly expanding genomic databases have enabled the identification of regions in the human genome intolerant to variation and thus likely relevant to human disease. However, despite their unprecedent...
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