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Carli Roush

@phagephan.bsky.social
1.1K followers 258 following 14 posts

Ph.D. candidate at Georgia Tech studying bacteriophages, among other larger things B.S. in Ecology and Evolutionary Biology at Yale she/her

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Reposted by Carli Roush
Curtis Suttle @virosphere.bsky.social · 13/08/2026
Professor in Bacteriophage Biology & Evolution at the University of British Columbia (UBC). Closing date 1 October, with an expected start date no earlier than January 1, 2027, and a salary within the range of $200,000 to $270,000 per year. For details: ubc.wd10.myworkdayjobs.com/en-US/ubcfac...
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Carli Roush @phagephan.bsky.social · 12/08/2026
Thrilled to share my first paper out of grad school. We sequenced dental wastewater (yes, the stuff collected during teeth cleaning) and found previously unknown bacteriophages harbored in the human mouth. #phagesky #microsky 🧵 journals.asm.org/doi/10.1128/...
journals.asm.org
Dental wastewater reveals a hidden reservoir of oral bacteriophage diversity | Microbiology Spectrum
The human oral cavity contains a diverse microbial community, but the bacteriophages (phages) that infect many oral bacteria remain poorly characterized. This gap limits our understanding of how phage...
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Vaughn Cooper @vscooper.micropopbio.org · 06/06/2026
Now @paulturnerlab.bsky.social on phage therapy
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Jeremy Yoder says no war @jbyoder.org · 09/04/2026
"The fact that there is no current consensus of biological sex is not antithetical to science... However, the field urgently needs an ethical and reproducible approach for discussing sex" There is No Consensus on Biological Sex
buff.ly
There is No Consensus on Biological Sex
At this critical moment when misinformation about sex is being applied to policy globally, scientific clarification on the definition of biological sex is valuable. Here, we evaluate the primary…
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Joshua Weitz @joshuasweitz.bsky.social · 09/04/2026
"The acting director of the Centers for Disease Control and Prevention (Jay Bhattacharya) has delayed publication of a CDC report showing the covid-19 vaccine cut the likelihood of emergency department visits and hospitalizations for healthy adults last winter by about half." !!! 🎁
wapo.st
CDC delays publishing report showing covid vaccine benefits
The acting CDC director cited concerns with the methodology, but the design has long been used to test vaccine effectiveness.
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Daria Van Tyne @dariavantyne.bsky.social · 08/04/2026
My lab at Pitt is looking for a Research Scientist to help us make phage therapy for patients with antibiotic-resistant infections. Please share and apply! cfopitt.taleo.net/careersectio...
cfopitt.taleo.net
Research Scientist
Click the link provided to see the complete job description.
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Carli Roush @phagephan.bsky.social · 13/02/2026
Fascinating seminar from @dariavantyne.bsky.social at GSU today!
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Society for the Study of Evolution @sse-evolution.bsky.social · 07/10/2025
Nominations are now open for the Dobzhansky Prize, which recognizes the accomplishments and future promise of an outstanding early-career evolutionary biologist. The award includes $5000 and an award talk at the in-person Evolution meeting. Deadline: December 1 shorturl.at/p70wY
Text: Society for the Study of Evolution Dobzhansky Prize to recognize the accomplishments and future promise of an outstanding early-career evolutionary biologist. Nominations due December 1, 2025.
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Indivisible ❌👑 @indivisible.org · 06/10/2025
Senate Democrats continue to hold the line to protect healthcare for millions of Americans and stop health insurance costs from doubling this winter. More votes are expected today, and your senators need to hear from you. Encourage Democrats to keep fighting: act.indivisible.org/sign/funding...
(next to an image of the Capitol and a hand holding a megaphone) STOP THE TRUMP SHUT DOWN
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Vaughn Cooper @vscooper.micropopbio.org · 03/04/2025
Our new preprint by @nanamikubota.bsky.social shows that P. aeruginosa, and likely many other bacteria carrying filamentous prophages (like V. parahaemolyticus), risk being exploited by these phages in a runaway process that reduces fitness of both host and virus. www.biorxiv.org/content/10.1... 🧵
biorxiv.org
Filamentous cheater phages drive bacterial and phage populations to lower fitness
Many bacteria carry phage genome(s) in their chromosome (i.e., prophage), and this intertwines the fitness of the bacterium and the phage. Most Pseudomonas aeruginosa strains carry filamentous phages ...
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Laura Williams @laurawilliams.bsky.social · 26/09/2025
NSF GRFP solicitation out. App deadlines now in November. As others noted, eligibility rules for current graduate students now exclude 2nd year grad students. See the solicitation - they’ve emphasized “first year” and “less than one academic year” in grad program. www.nsf.gov/funding/oppo...
nsf.gov
NSF Graduate Research Fellowship Program (GRFP)
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Joe Sorg @thejoesorg.bsky.social · 12/09/2025
We're hiring! 5 tenure track assistant professors. 2 #microbiology, 2 #Evolution, 1 #biologicalclocks jobs.sciencecareers.org/job/675062/f...
jobs.sciencecareers.org
Five Tenure-Track Assistant Professor Positions in Microbiology, Evolution, and Biological Clocks - College Station, Texas job with Department of Biology - TAMU | 675062
Texas A&M University (TAMU) invites applications for five full-time, tenure-track Assistant Professor positions
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Ellinor Alseth @ellinoralseth.bsky.social · 08/08/2025
Feels surreal to say but: I'm hiring! If you are or know anyone interested in looking at the evolution of phage resistance using A. baumannii and natural transformation, then this might be for you www.jobbnorge.no/en/available...
jobbnorge.no
Research position in Microbial Pharmacology and Population Biology (282139) | UiT The Arctic University of Norway
Job title: Research position in Microbial Pharmacology and Population Biology (282139), Employer: UiT The Arctic University of Norway, Deadline: Wednesday, August 27, 2025
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Juan Del Toro, PhD @drjuandeltoro.bsky.social · 14/07/2025
My NIH diversity supplement was reinstated! 🥳 This is not the time to keep quiet or feel defeated by this administration. This is the time to raise hell 🔥 and be heard ✊🏽
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Joshua Weitz @joshuasweitz.bsky.social · 25/06/2025
Midway through a full week, early career focused event at University of Maryland. Ever more excited for what could be in the study of phage dynamics across scales. Many thanks to all the lecturers, student/postdoc participants, lab instructors, and support. weitzgroup.umd.edu/workshops/
Quantitative Phage-Bacteria Dynamics Across Scales Group Photo, College Park, MD, June 24, 2025
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James Gurney @jamesgurney.bsky.social · 27/05/2025
Anyone aware of somebody doing compassionate release type phage therapy in Canada? A friend of mine is having a lot of trouble with ever increasing AMR Pseudomonas aeruginosa.
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Jeremy Yoder says no war @jbyoder.org · 27/05/2025
“Importantly, under long-standing law and practice, NIH does not have the authority to arbitrarily terminate grants. Its funding decisions must be guided by congressional mandates, regulatory requirements, and scientific expertise, not vague and undefined criteria.”
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Brian Wasik @brianrwasik.bsky.social · 02/05/2025
We're in an epic, generational crisis.
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Ellinor Alseth @ellinoralseth.bsky.social · 10/04/2025
Mystique is here! When I started my position at @cmdi.bsky.social there were no readily available phage against my A. baumannii focal strain. The solution? Finding my own phage ofc. Mystique is a broad host range Acinetobacter phage, and I'm thrilled to see this work out today #PhageSky 🧪🦠
journals.plos.org
Mystique, a broad host range Acinetobacter phage, reveals the impact of culturing conditions on phage isolation and infectivity
Author summary Bacterial infections caused by Acinetobacter baumannii are a major global health concern due to high antibiotic resistance, earning it a critical priority pathogen ranking by the WHO. P...
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Needhi Bhalla 💅🏽 @needhibhalla.bsky.social · 08/04/2025
If a student you know received an honorable mention for the NSF GRFP, encourage them to contact their Congressional representatives! 🧪
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Ben Casselman @bencasselman.bsky.social · 31/03/2025
Tariffs get all the attention, but ask economists what they're really worried about and many will point to the Trump administration's cuts to federal support for the sciences, including canceling grants and revoking student visas. #EconSky www.nytimes.com/2025/03/31/b...
nytimes.com
Trump’s Science Policies Pose Long-Term Risk, Economists Warn (Gift Article)
Since World War II, U.S. research funding has led to discoveries that fueled economic gains. Now cutbacks are seen as putting that legacy in jeopardy.
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Joshua Weitz @joshuasweitz.bsky.social · 26/03/2025
Due to circumstances beyond our control, the AMS Math Programs page remains unavailable. We have put together a new application site, applications now due April 4. We will make expedited decisions. Travel awards available. bit.ly/phageschool2... Please share. The Summer School is on!
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Rob Edwards @linsalrob.bsky.social · 12/03/2025
Check out this list of awesome #virome tools and be sure to add yours! github.com/shandley/awe... #phagesky #microsky
github.com
GitHub - shandley/awesome-virome: A listing of software, tools and databases useful for virome analysis
A listing of software, tools and databases useful for virome analysis - shandley/awesome-virome
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Carli Roush @phagephan.bsky.social · 12/03/2025
I feel like I spend most of my bioinformatics time just trying to install packages 🙃
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Prem Thakker ツ @premthakker.bsky.social · 09/03/2025
NEWS: Last night, the Department of Homeland Security detained a Palestinian who helped lead the Columbia encampment. Agents told him his visa was revoked. He said he had a green card. They were confused—then said that was revoked too. His attorney demanded a warrant. Agents hung up instead.
zeteo.com
BREAKING: DHS Detains Palestinian Student from Columbia Encampment, Says Advocates
Agents told him his student visa was revoked. But he had a green card. Agents then said that was revoked too.
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Steven Mathern @stevenmathern.bsky.social · 01/03/2025
per @michaelmina.bsky.social 'we discovered an exceptionally strong relationship between measles epidemics and all cause childhood mortality - following outbreaks of measles, child mortality was increased for 2-3 years' www.science.org/doi/10.1126/...
science.org
Long-term measles-induced immunomodulation increases overall childhood infectious disease mortality
Preventing measles prevents immune memory damage and nonspecifically safeguards against many childhood infections.
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Daniel Bolnick @danielbolnick.bsky.social · 02/03/2025
If you have experienced direct harm to your work/lab/job due to recent changes at US NSF, & are willing to share this on behalf of the Am. Society of Naturalists and NSF, please DM/ email me ASAP (this is time-sensitive) or submit story here sites.google.com/view/scienti... Please share widely
sites.google.com
Scientists' Stories - How to Contribute
How to contribute a Story
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CantlonLab @cantlonlab.bsky.social · 18/02/2025
Join us! Science Homecoming helps scientists reconnect with communities by writing about the importance of science funding in their hometown newspapers. We’ve mapped every small newspaper in the U.S. and provide resources to get you started. Help science get back home 🧪🔬🧬 🏠 sciencehomecoming.com
sciencehomecoming.com
Science Homecoming
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Jeremy Berg @jeremymberg.bsky.social · 09/02/2025
F99/R00 AND K99/R00 DIVERSITY AWARD APPLICANTS If you have applied for a F99/R00 or K99/R00 Diversity award and the study section for review is not listed on your eRA Commons page, please reach out to me. DM me, email berg.grants.2029@gmail.com, Signal jeremymberg.78 THANK YOU
media.tenor.com
a picture of a cartoon character with the words call me on it
ALT: a picture of a cartoon character with the words call me on it
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Jeremy Berg @jeremymberg.bsky.social · 07/02/2025
ATTENTION If you are someone who had an F31-Diversity (or similar) application submitted this cycle, please DM me here, contact me on signal (jeremymberg.78), or email me at jeremymberg@gmail.com. I will keep all information confidential. 2/n
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David Shiffman, Ph.D. 🦈 @whysharksmatter.bsky.social · 06/02/2025
🚨Academic scientist friends who are members-ideally leaders- of scientific professional societies, I need your help. 🚨 There is a sign-letter being prepared that will speak out against recent politicization of scientific funding and demonization of scientific researchers. 🧪🌎🦑
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Krutika Kuppalli, MD FIDSA @krutikakuppalli.bsky.social · 28/01/2025
It’s shocking how few people know about the #Tuberculosis outbreak in Kansas. Why? Because the CDC can’t issue notifications to alert healthcare workers about it. #PublicHealth
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Josh Marshall @joshtpm.bsky.social · 24/01/2025
The FDA has scrubbed from its website guidance on conducting medical trials with representative numbers of men/women and racial/ethnic minorities. these aren't symbolic issues. Drugs affect men/men, people with different genetic backgrounds differently. talkingpointsmemo.com/edblog/medic...
talkingpointsmemo.com
Medical Trial Guidance Scrubbed
Another detail out of FDA. The agency has removed pages which provide...
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Meng-meng Fu @mengmengfu.bsky.social · 24/01/2025
If you’re a federal govt employee targeted for leave or termination on the basis of your DEI work, please file an EEO (Equal Employment Opportunity) complaint & retain legal counsel. I’m a former NIH PI. Happy to refer you to a law firm that has successfully sued the govt many times! Pls repost 🙏❤️
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ASM @asm.org · 22/01/2025
We’re thrilled to announce the election of Vaughn Cooper, Ph.D., as the new ASM President-Elect & the newly elected At-Large Board Directors Joanna Goldberg, Ph.D., & Michael Johnson, Ph.D. Congrats to our elected officers! Read more: asm.social/2fU @vscooper.micropopbio.org @copperbae.bsky.social
Vaughn Cooper, Ph.D.; Joanna Goldberg, Ph.D.; Michael Johnson, Ph.D.
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Vaughn Cooper @vscooper.micropopbio.org · 21/01/2025
I'm incredibly honored by this opportunity to serve as President-Elect of @asm.org starting this summer. Looking forward to working with the Board, ASM leadership ,and staff to help advance the microbial sciences. I'm also glad to share my Vision statement, please join us! asm.org/Press-Releas...
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Sam Brown @brownlab.bsky.social · 17/01/2025
Hello world! I'm starting out on bluesky with a job posting - we're looking for lab research tech who shares our love of bugs. More info here brownlab.biology.gatech.edu/opportunities/
brownlab.biology.gatech.edu
Opportunities
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Nature Microbiology @natmicrobiol.nature.com · 08/01/2025
OUT NOW - Streptomyces secretes a siderophore that sensitizes competitor bacteria to phage infection www.nature.com/articles/s41...
nature.com
Streptomyces secretes a siderophore that sensitizes competitor bacteria to phage infection - Nature Microbiology
A secondary metabolite sensitizes competitor Bacillus subtilis to a wide panel of lytic phages by sequestering iron and preventing the activation of Spo0A.
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Liam Rooney @liam-rooney.bsky.social · 21/12/2024
🚨 New pre-print out! 🚨 The world’s first fully 3D printed microscope! Is Santa bringing you a 3D printer for Christmas, or maybe you need a gift for your favourite microscopist - print the lenses, print the frame, and start imaging! ✨🔬 Check it out below and please repost!👇🏻🙏🏻 (1/N)
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Brittany Ross @persisterbritt.bsky.social · 29/11/2024
The Ross Lab is recruiting a PhD student! We study the physiology of chronic bacterial infection using M. abscessus. Contact me if interested! Check out the projects here www.findaphd.com/phds/project...
findaphd.com
Using Informatics and Molecular Biology to Understand Chronic Bacterial Infection Physiology at Georgia State University on FindAPhD.com
PhD Project - Using Informatics and Molecular Biology to Understand Chronic Bacterial Infection Physiology at Georgia State University, listed on FindAPhD.com
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Craig MacLean @craigmaclean.bsky.social · 26/11/2024
Has anybody had good results using plasmid sequencing companies (PlasmidsNG, PlasmidSaurus, etc.) to sequence "real" plasmids - ie >30Kb, containing transposons etc. or phage?
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Bruno Lima (he/him) 🏳️‍🌈 @blimamicro.bsky.social · 22/11/2024
Here's a link to a shorter version of the article just published today at PLOS Biology (dx.plos.org/10.1371/jour... )
dx.plos.org
Queer- and trans-inclusive faculty hiring—A call for change
Queer and trans scientists face varied and systemic barriers to their professional success, resulting in a relative absence from faculty ranks at many institutions. This Perspective calls for a change...
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Vaughn Cooper @vscooper.micropopbio.org · 19/11/2024
🚨Travel awards for Early Career Researchers to attend ASM Microbe🧫 1. Awarded through ASM Branches 2. $1650 per award, 3 per branch 3. Apps open now! 4. Named for Peggy Cotter, ASM past president & advocate 5. A proud accomplishment when I was COMS Chair 6. Apply / share! asm.org/Travel-Award...
asm.org
Peggy Cotter Travel Award
ASM is a nonprofit professional society that publishes scientific journals and advances microbiology through advocacy, global health and diversity in STEM programs.
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Carli Roush @phagephan.bsky.social · 14/11/2024
So great to see the recent explosion over here! Especially since my therapist said, and I quote, "I encourage you to follow your instincts" when I mentioned thinking about deleting my account on The Other Website
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Ellinor Alseth @ellinoralseth.bsky.social · 11/07/2024
Going from PhD to independent postdoc has been hard, and switching bacteria didn't make it easier. Especially when I found out that my A. baumannii (5075) has/had no available phage. But, that meant I had a gap to fill! And that's resulted in this work here: www.biorxiv.org/content/10.1...
biorxiv.org
Environmental differences impact Acinetobacter baumannii phage isolation and infectivity
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
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Jess McLaughlin, PhD (they/them) @jfmclaughlin92.bsky.social · 14/03/2024
woooo it's live! very excited to share this piece in Cell, where we lay out how transphobia is deeply intertwined with other forms of oppression, how it shapes the way we frame research, and what other scientists + institutions can do to support trans scientists:
cell.com
Rigorous science demands support of transgender scientists
To build a just, equitable, and diverse academy, scientists and institutions must address systemic barriers that sex and gender minorities face. This Commentary summarizes (1) critical context informi...
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Carli Roush @phagephan.bsky.social · 08/02/2024
Wonderful to have Alita Burmeister visit and give a seminar at GT!
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Ed Yong is offline @edyong209.bsky.social · 20/11/2023
It’s Trans Day of Remembrance. 🏳️‍⚧️ Here are some orgs/people I donate to: - Trans Lifeline translifeline.org - Gender Reveal (podcast+microgrants) www.genderpodcast.com/donate - Assigned Media/Evan Urquhart www.assignedmedia.org/support - Katelyn Burns www.patreon.com/katelynburns
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