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Penn Epigenetics Institute

@pennepigenetics.bsky.social
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Penn Epigenetics Institute at The University of Pennsylvania Perelman School of Medicine, Philadelphia, PA

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CAMB Graduate Group @cambupenn.bsky.social · 16/09/2026
Learn 🔍️ about CAMB tomorrow! 4pm ET, September 17th.📣 All prospective PhD students - 👩‍💻 - registration required. Access link 🔗 to register with QR code.
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korblab @korblab.bsky.social · 09/09/2026
Congratulations to Dr. Sangree for a truly fantastic thesis defense!! It’s been a privilege having you in the lab Annabel. We will miss you very much.
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CAMB Graduate Group @cambupenn.bsky.social · 27/08/2026
Join us for a CAMB Virtual 👩‍💻 Admissions Q&A for prospective PhD students! 🙋‍♂️September 24th at 4pm. Link 🔗 to register via the QR code.
Flyer announcing a Cell and Molecular Biology virtual admissions Q&A for prospective PhD students on Thursday, September 24 at 4 PM ET, featuring a QR code to register, a brief list of research areas (cancer, cell biology, genetics, microbiology) and the Perelman School of Medicine logo.
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CAMB Graduate Group @cambupenn.bsky.social · 27/08/2026
📣 Calling all prospective PhD students! 👩‍💻 🔎 Learn more about CAMB at 4pm ET, September 17th. Access link 🔗 to register with QR code.
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Andrew Modzelewski @themodzlab.bsky.social · 26/08/2026
Check out our lab's FIRST major paper and preprint! Currently in review at Nat Comm! Stay tuned for bigger and better revisions!
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George Burslem @gburslem.bsky.social · 24/08/2026
It's been a great couple of weeks for publications from the lab! First up we have a generalizable induced proximity system for gain of function PTM editing exemplified by acetylation and led by @briehp.bsky.social pubs.acs.org/acbcct/artic...
pubs.acs.org
General Strategy for Controlling Functional Lysine Acetylation via Induced Proximity
AbstractAssigning causal function to post-translational modifications (PTMs) remains a central challenge in molecular biology, as most modification events
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CAMB Graduate Group @cambupenn.bsky.social · 23/08/2026
Kiara Rodríguez-Acevedo in the Heller lab (@eahellerphd.bsky.social) defends her thesis tomorrow!
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Cell Chemical Biology @cp-cellchembiol.bsky.social · 12/08/2026
Online now! Online now! Beyond acetylation: Evaluating the emerging biology of lysine acylation #chembiol
dlvr.it
Beyond acetylation: Evaluating the emerging biology of lysine acylation
Lysine acylation is emerging as a fundamental mechanism linking cellular metabolism to protein regulation. Hintzen and Burslem synthesize the chemical biology, mechanistic principles, and unresolved questions that are redefining lysine acylation from an expanding catalog of modifications into a unifying framework for understanding metabolic regulation while outlining challenges.
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Genes & Development @genesdev.bsky.social · 13/08/2026
RESEARCH COMMUNICATION: TET1 noncatalytic activity shapes the chromatin landscape associated with de novo methylation establishment in the male germline By Prasasya et al., and Marisa Bartolomei ➡️ genesdev.cshlp.org/content/40/15-16… University of Pennsylvania Penn Medicine
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Liz Heller @eahellerphd.bsky.social · 04/08/2026
So proud of Kiara!
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Liz Heller @eahellerphd.bsky.social · 25/07/2026
Super excited to be included in this - thank you Amber Dance and @nature.com.
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Lukasz Bugaj @bugajlab.bsky.social · 21/07/2026
A bit late but…Tenured! Immense gratitude for those who got us here. Firstly the students/postdocs (too many to list!) who took a chance on an unproven lab and were unafraid to pursue some strange new ideas. I couldn't have predicted our path, and I couldn’t be more excited for what's next.
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Melike Lakadamyali @melikel.bsky.social · 13/07/2026
Very proud of Dr. Kim on a stellar defense. This is a bittersweet moment for the lab as she will be missed. But a bright future awaits her in her new career and we all wish her the best of luck. Her contributions will continue to make an impact in our science and the field for many years to come!
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CAMB Graduate Group @cambupenn.bsky.social · 13/07/2026
Mingjia Li in the Zhou Lab defends her thesis tomorrow!
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CAMB Graduate Group @cambupenn.bsky.social · 08/07/2026
🎉 Congratulations to newly defended CAMB PhD graduate Krista Budinich from the Wan Lab on her first-author publication in Molecular Cell! 🎉
cell.com
RNA reinforces condensate nucleation on chromatin to amplify oncogenic transcription
Budinich et al. show that locally produced transcripts reinforce the nucleation of pathogenic condensates formed by mutant ENL at permissive target loci. This RNA-enhanced condensate nucleation in…
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Live Science @livescience.com · 04/05/2026
Estrogen in both the male and female brain shapes responses to trauma, study suggests www.livescience.com/health/neuro...
livescience.com
Estrogen in both the male and female brain shapes responses to trauma, study suggests
Traumatic experiences can cause memory problems, and estrogen may be a key factor that shapes the brain's resilience against such stressors, a mouse study finds.
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Liz Heller @eahellerphd.bsky.social · 03/02/2026
Extremely proud of Rachael @neurohoke.bsky.social and Kiara for this work. I have learned so much working with @talliezee.bsky.social and the whole team.
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Abby Buchwalter @abbybuch.bsky.social · 21/06/2026
After some good funding news, we are hiring! Looking for a postdoc to join our team and lead our explorations into transposon repression by the nuclear lamina. Check out the full ad on our lab website at buchwalter-lab.github.io/postdoc-ad.pdf + contact me to learn more!
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Melike Lakadamyali @melikel.bsky.social · 04/06/2026
I am so happy to see our paper on spatial feature based analysis of chromatin states in print in Nature Communications. Here is an early access version of O-SNAP: www.nature.com/articles/s41...
nature.com
O-SNAP uncovers nanoscale chromatin remodeling in dedifferentiation and stress responses - Nature Communications
Changes in nuclear architecture during cell state transitions remain poorly understood. Here, the authors use O-SNAP, a framework to analyze SMLM images of chromatin, to reveal chromatin remodelling i...
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The Colton Consortium for Autoimmunity @coltonconsortium.bsky.social · 15/05/2026
Join us next Tuesday (May 19, 11am ET) for the Colton Consortium Virtual Seminar featuring Montserrat Anguera, PhD (Penn Vet) who will be covering "Sex Differences in Autoimmune Disease: Xist RNA-Mediated Mechanisms That Influence B Cell Function." Registration required: bit.ly/4wwhLdP
events.zoom.us
Colton Virtual Seminar Series
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Journal of Cell Biology @jcb.org · 18/05/2026
🔬 From our May issue: Immunofluorescence of human induced pluripotent #StemCells (hiPSCs)-derived cardiac myocytes acquired with a confocal microscope (Leica SP8). Cyan, lamin A/C; gray, DAPI (DNA); FIRE, troponin. From Kaitlyn M. Shen et al. @pennepigenetics.bsky.social: doi.org/10.1083/jcb....
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CAMB Graduate Group @cambupenn.bsky.social · 06/05/2026
Gabriel Birchak in the Black lab defends his thesis tomorrow!
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Colin Conine @colinconine.bsky.social · 24/04/2026
And highlighted in Science! www.science.org/content/arti...
science.org
Sperm carry unexpected genetic messages
Maturing mouse sperm get loaded with full-length messenger RNAs that are transferred to fertilized egg, suggesting a new route for paternal influence
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Colin Conine @colinconine.bsky.social · 20/04/2026
Now published in NAR. Thanks to the editor and reviewers who provided a great review experience which certainly improved the paper. urldefense.com/v3/__https:/...
urldefense.com
Epididymal extracellular vesicles harbor and convey mRNA to sperm for transfer to zygotes
Abstract. The epididymis plays a critical role in promoting sperm maturation, including remodeling the sperm RNA payload. While small RNAs have been extens
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Mir Lab @mirlab.bsky.social · 16/04/2026
Very proud of Samantha "S" Fallacaro the first student from our lab to defend their thesis! Check out her latest work (tinyurl.com/42hdfssz) where she shows that "hubs" formed by the transcription factor Dorsal are emergent features of binding kinetics, not higher-order regulatory assemblies.
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CAMB Graduate Group @cambupenn.bsky.social · 13/04/2026
Samantha Fallacaro in the @mirlab.bsky.social defends her thesis tomorrow!
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Alessandro Scacchetti @metalsga.bsky.social · 14/04/2026
Check out this new preprint from our lab. Kudos to Huizi! Yes, ants are amazing. www.biorxiv.org/content/10.6...
biorxiv.org
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Max Planck Institute of Immunobiology and Epigenetics @mpi-ie.bsky.social · 02/04/2026
The 8th Epigenetics Meeting is coming — Dec 2–4, 2026, Max Planck Freiburg. 27 top speakers. Chromatin biology, epigenetic regulation, and real conversations. And you☝️!? Registration is open. Don't wait. 👇 🔗 events.ie-freiburg.mpg.de
Poster for the Max Planck Freiburg 8th Epigenetics Meeting from 2 to 4 December 2026 listing speakers, keynote, registration details, and contact information on a dark blue background with yellow and white text
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Upasna Sharma @upasnasharma.bsky.social · 01/04/2026
I’m happy to announce the first US-based international meeting on epigenetic inheritance, taking place July 15–17, 2026. Registration is now open! Join us for an exciting program featuring outstanding speakers and cutting-edge research. Please share and spread the word! #EpigeneticInheritance2026
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Arjun Raj @arjunraj.bsky.social · 21/03/2026
One of my very favorite papers from the lab! Shows that individual cells can learn by forming memories. Amazing work by Jess Li!
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Takashi Akera Lab @takashiakeralab.bsky.social · 22/03/2026
We are hiring POSTDOC now!🚨please repost! Fully-funded 5-year position 👩🏻‍🔬👨‍🔬🧬Looking forward to your application!✉️
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Mir Lab @mirlab.bsky.social · 20/03/2026
@mukherja.bsky.social work on RNAPII clusters is in print today: www.nature.com/articles/s41... Congrats! TLDR: RNAPII clusters represent transcriptonally engaged molecules at single genes, not super-stochiometric assemblies. Please check it out and see the the thread below for a summary.
nature.com
A single cluster of RNA Polymerase II molecules is stably associated with active genes - Nature Communications
Live molecular-scale imaging in fly embryos shows that a single RNA Polymerase II cluster stays bound to active genes during transcription. Cluster formation requires initiation, and intensity represe...
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Apratim (Appy) Mukherjee @mukherja.bsky.social · 18/09/2025
(1/3) Excited to post our updated pre-print! We show RNAPII clusters are simply collections of polymerase molecules stably engaged at single genes & cluster intensity is strongly correlated with txn output during Drosophila embryogenesis. www.biorxiv.org/content/10.1...
biorxiv.org
A single cluster of RNA Polymerase II molecules is stably associated with active genes
In eukaryotic nuclei, transcription is associated with the clustering of RNA Polymerase II (RNAPII) molecules. The mechanisms underlying cluster formation, their interactions with genes, and their imp...
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Colin Conine @colinconine.bsky.social · 19/03/2026
There is accumulating evidence that sperm miRNAs function to regulate embryonic gene expression and transmit inherited phenotypes to offspring but how does this work since sperm cargo is massively diluted in the egg upon fertilization. Here we directly address this ? www.biorxiv.org/content/10.6...
biorxiv.org
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Colin Conine @colinconine.bsky.social · 10/03/2026
Check out this collaboration between Kellie Jurado’s lab and mine. We find that paternal immune activation reprograms the epididymis and, subsequently, small RNAs in sperm, which modulate post-fertilization embryonic gene expression and immunity in offspring in a sex-specific manner.
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CAMB Graduate Group @cambupenn.bsky.social · 10/03/2026
Kenneth Pham in the @creminslab.bsky.social defends his thesis tomorrow!
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Institute for Immunology and Immune Health (I3H) @i3h-upenn.bsky.social · 09/03/2026
A new CRISPR tool used directly in patients’ cancer cells can pinpoint genes driving acute myeloid leukemia (AML) — helping identify drug targets and uncover why some cancers resist treatment. Published by Penn Medicine & CHOP in Molecular Cell. bit.ly/4cqeZiB
bit.ly
First CRISPR-based platform to pinpoint leukemia drivers | Penn Today
The new toolkit, developed by Penn Medicine and Children’s Hospital of Philadelphia, allows researchers to test potential cancer targets directly in patient leukemia cells.
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University of Pennsylvania @upenn.edu · 09/03/2026
With the spring season on the horizon, Penn Today returns to a story that reveals how plants respond to seasonal flowering cues, protecting their offspring by shielding the stem cells at their growing tip. bit.ly/4qJ2HGr
penntoday.upenn.edu
How plants ‘hedge their bets' for better reproductive success | Penn Today
Penn biologists reveal how plants respond to seasonal flowering cues while protecting the stem cells at their growing tip, enabling continuous reproduction in changing environments.
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