Sign in

Mike Connelly

@michaeltconnelly.bsky.social
303 followers 269 following 11 posts

Postdoc Fellow at NHGRI, Research Associate at Smithsonian NMNH. Cnidarian evolution, symbiosis, cell biology, and conservation genomics. PhD at University of Miami Rosenstiel School. Posts are my own. 🪼🪸🧬💙

PostsRepliesMedia
Reposted by Mike Connelly
Genetics Society of America @genetics-gsa.bsky.social · 10/09/2026
📢 NEW GENOME ALERT in #G3journal A high-quality, chromosome-level genome of marine hydrozoan Podocoryna americana will be an invaluable resource for researchers studying the evolution, regeneration, and allorecognition in cnidarians and other metazoans. @baxevanislab.bsky.social 🔗 buff.ly/vhGW2gm
042
Reposted by Mike Connelly
Dr. Brendan "Doesn't-go-to-Ravenholm" Pinto @drpintothe2nd.bsky.social · 27/08/2026
Tldr; MORE SEX CHROMOSOMES AND GECKO GENOMES
0185
Mike Connelly @michaeltconnelly.bsky.social · 24/08/2026
At the Jersey shore this week spending some quality time with family, and was stoked to find some Hydractinia while beach combing near the bridge from Longport to Ocean City! Looking forward to sharing recent work on the population genomics of these critters at @cnidofest.bsky.social next month 🪸🐚🪼
Selfie looking towards Ocean City, NJHermit crabs with Hydractinia colonies
160
Reposted by Mike Connelly
Marina Stoilova @stoilovamarina.bsky.social · 22/07/2026
Please share with any recent college grads you know who are interested in using genetic tools in non-model organisms (🪼), sensory/neurobiology, or confocal microscopy. In addition to research mentorship, the students will have access to excellent professional development resources through OASiS 🦑🧪🧬
0119
Reposted by Mike Connelly
Mike Connelly @michaeltconnelly.bsky.social · 17/07/2026
Happy to share that our manuscript "A chromosome-level reference genome for the colonial marine hydrozoan Podocoryna americana" is now available at G3: doi.org/10.1093/g3jo... Many thanks to @baxevanislab.bsky.social, @pcart.bsky.social, @amkatzer.bsky.social and all the co-authors!
doi.org
A chromosome-level reference genome for the colonial marine hydrozoan Podocoryna americana
Abstract. Cnidarians are important models for studying the evolution of animal development, regeneration, cell type differentiation, and allorecognition. T
2269
Mike Connelly @michaeltconnelly.bsky.social · 17/07/2026
Happy to share that our manuscript "A chromosome-level reference genome for the colonial marine hydrozoan Podocoryna americana" is now available at G3: doi.org/10.1093/g3jo... Many thanks to @baxevanislab.bsky.social, @pcart.bsky.social, @amkatzer.bsky.social and all the co-authors!
doi.org
A chromosome-level reference genome for the colonial marine hydrozoan Podocoryna americana
Abstract. Cnidarians are important models for studying the evolution of animal development, regeneration, cell type differentiation, and allorecognition. T
2269
Reposted by Mike Connelly
genikhovich.bsky.social @genikhovich.bsky.social · 12/07/2026
journals.plos.org/plosone/arti...
journals.plos.org
Siphonophore genome structure and the evolution of functional specialization
Siphonophores (Cnidaria: Hydrozoa) are pelagic colonial marine invertebrates with many highly specialized bodies (zooids) within a single colony. Their unique biology and ecological importance have ma...
081
Reposted by Mike Connelly
Laurie Belcher @lauriebelch.bsky.social · 09/06/2026
The new OrthoFinder paper is out now! In this new work, we introduce major advances in accuracy and scalability, allowing analysis on much larger datasets www.nature.com/articles/s41... github.com/OrthoFinder/...
nature.com
OrthoFinder: improved phylogenetic orthology inference with enhanced accuracy and scalability - Nature Methods
The updated OrthoFinder v3 software boosts accuracy and scalability in phylogenetic orthology inference with massive and diverse datasets.
111158
Reposted by Mike Connelly
Iñaki Ruiz-Trillo @multicellgenome.bsky.social · 29/05/2026
1/8 Inside your body lies something ancient. Our @pnas.org paper uncovers the deep unicellular prehistory of blood cell types. See paper and video. @ibe-barcelona.bsky.social @icreacommunity.bsky.social @prbb.org @csic.es @csicdivulga.bsky.social pnas.org/doi/10.1073/...
44214
Reposted by Mike Connelly
cnidofest.bsky.social @cnidofest.bsky.social · 07/05/2026
Calling all cnidarian enthusiasts: Cnidofest 2026 will be Sept 23-27 in Woods Hole, Massachusetts. See cnidofest.org/meetings/cnidofest-2026 for more info. Abstract submission closes July 1. Registration closes Sept 2, but early registration is GREATLY preferred. Please join us!
cnidofest.org
Cnidofest - Cnidofest 2026
Woods Hole, Massachusetts - Wed., September 23, 2026 - Sun., September 27, 2026 REGISTRATION IS OPEN! Register HERE Registration closes September 2, 2026 -- but please register as soon as possible! SUBMIT YOUR ABSTRACTS HERE Abstracts are due by July 1, 2026. Guidelines are provided below.
0126
Reposted by Mike Connelly
MwahahahahahadScientist @mads100tist.bsky.social · 27/03/2026
"genAI can be used to create podcasts from a paper to teach st-" Let me stop you right there. Before you feed somebody's paper to a slop machine, invite that somebody to talk to your students about their paper. We're right here. We academics won't shut up about our work, man. 🧪
628174
Reposted by Mike Connelly
bioRxivpreprint @biorxivpreprint.bsky.social · 07/03/2026
A chromosome-level reference genome for the colonial marine hydrozoan Podocoryna americana www.biorxiv.org/content/10.64898/20…
001
Reposted by Mike Connelly
Andy Baxevanis @baxevanislab.bsky.social · 10/03/2026
🧬 New genome alert! We’ve generated a chromosome-level assembly for the hydrozoan Podocoryna. With both polyp and free-swimming medusa stages, Podocoryna is a powerful model for exploring the evolution of complex traits in early animal lineages.
143
Reposted by Mike Connelly
Uri Frank @thecocodium.bsky.social · 10/03/2026
A chromosome-level genome assembly of the cnidarian Podocoryna is just out. Well done @pcart.bsky.social , @baxevanislab.bsky.social and the other authors www.biorxiv.org/content/10.6...
biorxiv.org
0103
Reposted by Mike Connelly
Julia Van Etten @couchmicroscopy.bsky.social · 11/02/2026
Exciting announcement! My new department is launching a postdoc fellowship in quantitative biology. Fellows will be co-advised by two Bio faculty, one that is quant focused (not me) and one that is not (me???). I would love to co-sponsor a postdoc and build a collaboration so please reach out!
umd.wd1.myworkdayjobs.com
Post-Doctoral Associate
Job Description Summary Organization's Summary Statement: The Department of Biology at the University of Maryland, College Park seeks applications for three quantitative biology postdoctoral fellow po...
23443
Reposted by Mike Connelly
Andy Baxevanis @baxevanislab.bsky.social · 12/12/2025
A new Hydractinia single-cell atlas from the Schnitzler lab: >47K cells from feeding polyps and stolon tissue that refines major somatic cell lineages and recovers a novel population of putative immune cells – a valuable resource for the cnidarian research community and beyond! tinyurl.com/hsymSC
tinyurl.com
An updated and spatially validated somatic single-cell atlas of Hydractinia symbiolongicarpus - BMC Genomics
Single-cell RNA sequencing (scRNA-seq) has revolutionized transcriptomic research, enabling the creation of detailed tissue, organ, and species-level atlases for model organisms. In Hydractinia, a cni...
0216
Reposted by Mike Connelly
Wolfgang Huber @wkhuber.bsky.social · 16/09/2025
Science: only when you write up the manuscript, you realize what you should have done.
716632
Reposted by Mike Connelly
Coral Lab @corallab.bsky.social · 21/11/2025
Genome skimming yields thousands of loci, recovering mitochondrial genomes and nuclear markers. Other benefits are higher phylogenetic resolution, success with degraded samples, and compatibility with future bait sets (i.e., future-proof). Read more here: 🔗 naturalhistory.si.edu/research/inv...
041
Mike Connelly @michaeltconnelly.bsky.social · 17/11/2025
Now that shutdown is over, I'm looking forward to #SICB2026 in Portland, Oregon in January! Please check out Session 18: A Stinging Sense of Self: Cnidarian Cell Type Evolution on Sunday Jan. 4 at 10:00am! Also please reach out if you're interested in making lunch/dinner plans during the conference!
1185
Mike Connelly @michaeltconnelly.bsky.social · 04/08/2025
Reading this week: muscles! 💪🧬 Overview of Muscle Cytoskeleton (pubmed.ncbi.nlm.nih.gov/28640448/) Microtubules coordinate mitochondria transport... during muscle development (doi.org/10.1016/j.de...) Evolutionary origin of bilaterian smooth and striated myocytes (pubmed.ncbi.nlm.nih.gov/27906129/)
010
Reposted by Mike Connelly
Frank Schnorrer @frankschnorrer.bsky.social · 21/07/2025
Microtubules: the architect of muscles. Watch how microtubules transport mitochondria in proximity to energy consuming sarcomeres in muscles of flies and mice. @jeromeavellaneda.bsky.social @nunoluis.bsky.social @ibdm.bsky.social with @gomeslabo.bsky.social www.sciencedirect.com/science/arti...
15322
Reposted by Mike Connelly
LaBella Lab @lablabella.bsky.social · 24/06/2025
Alberto Rivera of the Baxevanis group @baxevanislab.bsky.social presents on the allorecognition in cnidarians 🪸 There is evidence for synteny and conservation across allorecognition complexes in Cnidaria... How does this compare to bilaterians? #Evol2025 #Evol25
083
Mike Connelly @michaeltconnelly.bsky.social · 16/06/2025
What I'm reading this (short) week: 🤖 Cell type evolution reconstruction across species through cell phylogenies of scRNAseq data (www.nature.com/articles/s41...) 🧬 Origin and evolution of eukaryotic transcription factors (doi.org/10.1016/j.gd...)
000
Mike Connelly @michaeltconnelly.bsky.social · 02/06/2025
What I'm reading this week: Nanos2 marks precursors of somatic lineages and is req'd for germline formation in Nematostella (www.science.org/doi/10.1126/...) Chromatin loops are an ancestral hallmark of the animal regulatory genome (www.nature.com/articles/s41...) - many thanks to the authors!
010
Mike Connelly @michaeltconnelly.bsky.social · 19/05/2025
What I'm reading this week 😀 Cubozoan transcriptome and neuropeptide identification (rdcu.be/emF7h) Nematostella mechanosensory neuron diversity (rdcu.be/emF7X) Cnidarian larvae sensory cell types and settlement (doi.org/10.1126/scia...) Siphonophore chromosome-scale genome (doi.org/10.1101/2025...)
020
Reposted by Mike Connelly
Casey Dunn @caseywdunn.bsky.social · 13/05/2025
Our chromosome-scale genome assembly of Nanomia septata, a siphonophore - doi.org/10.1101/2025... . Much larger than many other cnidarian genomes, fewer chromosomes, and highly rearranged. No smoking gun for how they achieve complex colony-level organization. Great work Namrata Ahuja and friends!
15011
Reposted by Mike Connelly
Jeannie Wilkening @jvwilkening.bsky.social · 06/05/2025
Despite how things ended, I still learned so much from my time at EPA about how applied, interdisciplinary science can drive progress on complex problems like climate change. I look forward to taking these experiences into my next chapter, with more details on that soon! 7/7
2182
Reposted by Mike Connelly
EvoDevo PanAm @evodevopanam.bsky.social · 03/05/2025
🌟We are excited to announce the non-bilaterian satellite symposia at PASEDB meeting Miami July 22, 2025! 🪼🪸 #pasedb #evodevo Organizers: Drs. Athula Wikarmanayake, Bill Browne & @natclarke.bsky.social Register here: evodevo.wildapricot.org/event-6007396
064
Reposted by Mike Connelly
EvolDir @evoldir.bsky.social · 09/04/2025
Graduate students can apply for the Robert D. Hevey, Jr. and Constance M. Filling Fellowship in Invertebrate Zoology at the Smithsonian. Applications due 28 April 2025. More info: naturalhistory.si.edu/research/inve… #gradstudent
naturalhistory.si.edu
Invertebrate Zoology
Invertebrate Zoology
021
Reposted by Mike Connelly
Yehu Moran @yehumoran.bsky.social · 28/01/2025
1/4 🚨 a brand new @biorxiv preprint from the lab! We charcterized both transcriptionally, morphologically and functionally (phagocytosis) immune cells from #Nematostella! We are convinced that our data supports the existence of such specialized cells! www.biorxiv.org/content/10.1... 🧵
biorxiv.org
4239
Reposted by Mike Connelly
Aide Macias-Muñoz @aidemm.bsky.social · 28/01/2025
Application reviews for a postdoc in my lab will begin next week. Two years of funding to conduct EvoDevo research using cnidarians.
01216
Reposted by Mike Connelly
Coral Lab @corallab.bsky.social · 16/01/2025
Congrats to Dr. Andrea Quattrini (Coral Curator, SI NMNH) for winning The Presidential Early Career Award for Scientists and Engineers! This is the highest honor bestowed by the United States federal government on outstanding scientists in the early stages of their independent research careers!
Dr. Andrea Quattrini holding up a big orange coral while standing in a room full of drawers that contain corals.
2379
Reposted by Mike Connelly
Andy Baxevanis @baxevanislab.bsky.social · 09/01/2025
Mike Connelly from our group sharing his hot-off-the-10X Podocoryna single-cell data @SICB2025, establishing a really solid foundation for future work on this very interesting and informative regenerative cnidarian. Stay tuned... more to follow!
093
Mike Connelly @michaeltconnelly.bsky.social · 02/01/2025
Looking forward to this symposium at #SICB2025 and meeting all the researchers in attendance!
042
Reposted by Mike Connelly
cnidofest.bsky.social @cnidofest.bsky.social · 03/12/2024
Cnidofest is excited to join the bluesky party! We will start a Cnidarian starter pack. Please like this post if you'd like to be in the pack!
1295
Reposted by Mike Connelly
Stowers Institute @stowersinstitute.bsky.social · 25/11/2024
This week's beautiful #MicroscopyMonday is a juvenile Nematostella with stinging cells labeled with eGFP (green). (Gibson Lab) #Biology
0204
Mike Connelly @michaeltconnelly.bsky.social · 25/11/2024
Check, check, is this thing on? Allow me to introduce myself! I'm Mike Connelly, and I'm an evolutionary biologist - currently a postdoc at the National Human Genome Research Institute and research associate at the Smithsonian National Museum of Natural History. I love cnidarians (esp. corals)!🪸
Coral colony on the sea floor
030