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Jake Sacks

@jsacks.bsky.social
279 followers 465 following 20 posts

Postdoc in Computational Neuroscience, PhD in Robotics from the University of Washington. Musician/composer. I love anything brains and music theory. He/him. jisacks.github.io

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Reposted by Jake Sacks
allen institute @alleninstitute.org · 01/04/2026
The Orange Cat Brain Atlas is here. 🧠🐈 Today, we published the first comprehensive cellular map of the orange cat brain. The new atlas reveals a single, specialized neuron responsible for behaviors like staring at walls, knocking objects off tables, and the 3am "zoomies."
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Reza Shadmehr @rezashadmehr.bsky.social · 15/03/2026
Today I received a note from a grad student who lives in Tehran. Her note gives you firsthand experience of what it’s like to live in a city that is being bombed, and what it’s like to be young and feel despair about your future. rezashadmehr.blogspot.com/2026/03/hope...
rezashadmehr.blogspot.com
Hopeless in Tehran
Essays on neuroscience
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Matt Golub @mattgolub.bsky.social · 25/09/2025
(1/n) How can we infer single-trial communication between 🧠 regions? Check out our ICML 2025 paper: “Accurate Identification of Communication Between Multiple Interacting Neural Populations,” by Belle Liu and @jsacks.bsky.social in my lab: arxiv.org/abs/2506.19094
arxiv.org
Accurate identification of communication between multiple interacting neural populations
Neural recording technologies now enable simultaneous recording of population activity across many brain regions, motivating the development of data-driven models of communication between brain region...
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Mel Brooks @officialmelbrooks.bsky.social · 12/06/2025
I told you we’d be back
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Dan Levenstein @dlevenstein.bsky.social · 01/05/2025
I for one am not sure what makes a theory formal but I like thinking about my theories dressed up in a cute little tuxedo 🥰🤵
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Marianna Zhang @mariannazhang.bsky.social · 26/04/2025
yesterday, my postdoc funding (salary and research funds) was cancelled by the National Science Foundation, effective immediately. I received the same generic, vaguely threatening, typo-ridden email as many of my colleagues who have had their awards terminated recently. (1/n)
email starting, "The U.S. National Science Foundation (NSF) has undertaken a review of its award portfolio. Each award was carefully and individually reviewed, and the agency has determined that termination of certain awards is necessary because they are not in alignment with current NSF priorites."
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Jake Sacks @jsacks.bsky.social · 27/04/2025
I've heard really good things! Replaying FFX for the Nth time right now lol
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Reposted by Jake Sacks
Guido Meijer @guidomeijer.com · 09/04/2025
The PhD students started writing motivational quotes on the whiteboard
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MIT Press @mitpress.bsky.social · 08/04/2025
We're disappointed to see Ben Barres's powerful book "The Autobiography of a Transgender Scientist" among the ~400 titles removed from the Naval Academy Library. Needless to say, we're proud to have published his book and will keep it — and his memory — alive.
thereader.mitpress.mit.edu
The Coming Out of a Transgender Scientist
"I know that I am making the right decision because whenever I think about changing my gender role, I am flooded with feelings of relief."
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Reposted by Jake Sacks
allen institute @alleninstitute.org · 01/04/2025
Big day for Brians! Please tag a Brian who should join us in this research. Scientists have learned a lot about brains, but they know hardly anything about Brians. That's why we're shifting from brain science to Brian science. 🧠📈 alleninstitute.org/news/announc...
alleninstitute.org
Announcing a shift from brain science to Brian science
Leading researchers at Allen Institute to study interests, behaviors, and brains of Brians.
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Harsha Gurnani @harshag.bsky.social · 25/03/2025
Super excited about our 2-day @cosynemeeting.bsky.social workshop on learning that pays tribute to the diversity of timescales, teaching signals and circuits that work together to shape adaptive behaviors, and where we hope to bridge insights from behavior, dynamics, and learning rules! #cosyne2025
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Jake Sacks @jsacks.bsky.social · 25/03/2025
Excited to share our #cosyne25 workshop on learning across timescales! Check out our awesome line-up of speakers across both days: learning-fast-and-slow.github.io
learning-fast-and-slow.github.io
Learning in the brain is a complex process occurring over multiple timescales, from rapid adaptation to prolonged practice-dependent changes. Rapid motor adaptation, statistical learning, even one-shot learning happens within minutes or hours, whereas slower processes, like acquiring new motor skills, perceptual priors, and complex cognitive abilities, may take days, weeks, or even longer. Often, these learning processes have been studied in isolation. However, animals and their brains do not operate with clear boundaries between different learning types, especially in dynamic and unpredictable environments. Instead, learning can occur on a continuum of timescales and depend on interrelated neural mechanisms, with differential recruitment of parallel or sequential processes across tasks. By integrating perspectives from both fast and slow learning paradigms, this workshop seeks to uncover the underlying principles that govern this continuum, the specific roles played by various brain regions and circuits, as well as how to experimentally disambiguate between learning processes. Two common frameworks will be used to guide discussion and unify insights from multiple perspectives: Learning rules: differentiated based on feedback structure (e.g., supervised, unsupervised, reinforcement learning), activity dependence, and brain regions. Evolution of neural population activity: with an emphasis on changes to latent dynamical structure and representational geometry that support new task-relevant computations. A discussion on distributed and multi-timescale learning mechanisms is particularly timely due to recent advances in three key areas: (1) the ability to chronically monitor and perturb large neural populations, including multiple brain areas simultaneously, (2) the explosion of statistical and machine learning tools to extract structure from high-dimensional behavioral and neural data, and (3) insights from training artificial neural networks with bio-inspired architectures on increasingly complex behaviors. The workshop is designed for experimentalists and theoreticians working across different neural systems, with the goal of fostering not only the exchange of empirical findings but also mathematical tools and methodologies for studying learning mechanisms. This includes a discussion of identifiability issues and other challenges of fitting models to behavioral data, neural recordings, and perturbation experiments. This broader community can inspire new theory-guided experimental designs for testing specific predictions and enable the integration of theory and data on multiple levels – behavior, population activity structure, and cellular mechanisms. We will also discuss more conceptual questions such as the distributed nature of learning, what governs the dominance (if any) of different learning mechanisms or circuits, and when such degeneracy may lead to competitive or synergistic interactions. We will try to work towards a more holistic understanding of biological learning by re-emphasizing behavioral modeling, formalizing dynamics of multi-site plasticity, and incorporating a diversity of dense and sparse teaching signals.
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Nicole Rust @nicolecrust.bsky.social · 24/03/2025
As we gear up for #cosyne2025, let's be aware of everyone we're missing. Most can't speak. So how about a roll call - one that doesn't name names? I know of >15 individuals from NIH that can't travel (b/c ban). +2 posters that will be delivered by PIs b/c trainees can't travel (visas). You? /1
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Harsha Gurnani @harshag.bsky.social · 22/03/2025
Visa/ green card holders in the US who had planned to go to @cosynemeeting.bsky.social , what are your current thoughts about leaving and reentering the US / has your university issued any new directive? I'm happy to dm/ chat over Signal too. #cosyne25 #neuroskyence
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Jake Sacks @jsacks.bsky.social · 17/03/2025
Programming midi drums always reminds me of spike trains
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Jake Sacks @jsacks.bsky.social · 05/02/2025
Unironically should be a new standard
youtu.be
Lord Farquaad
YouTube video by Shrek Is Love - Topic
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Eugene Vinitsky 🍒 @eugenevinitsky.bsky.social · 25/01/2025
Putting 4'33 on loop to get in the zone and get some work done
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Jake Sacks @jsacks.bsky.social · 24/01/2025
I wouldn't have it any other way 🫶
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Joao Barbosa @jbarbosa.org · 17/01/2025
Imagine the whole world looking this. It is actually pretty easy to improve our lives, no need for new tech magic or some mars migration BS: just abolish cars from city centres
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Jake Sacks @jsacks.bsky.social · 31/12/2024
Warm up GPUs
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Grace Lindsay @neurograce.bsky.social · 23/12/2024
What papers do you like that demonstrate the use of 'orthogonal subspaces' for encoding information in neural populations? #neuroskyence #compneuro #neuroAI
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Jonathan A. Michaels @jonathanamichaels.bsky.social · 23/12/2024
Can the motor system use sensory expectations to prepare for unexpected events? Excited to share my latest work with @andpru.bsky.social – where we establish that sensory expectations shape neural population dynamics in motor circuits! 🧵 and paper below 1/
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Cian O'Donnell @cianodonnell.bsky.social · 11/12/2024
petition to change the word describing ChatGPT's mistakes from 'hallucinations' to 'confabulations' A hallucination is a false subjective sensory experience. ChatGPT doesn't have experiences! It's just making up plausible-sounding bs, covering knowledge gaps. That's confabulation
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Spageddy Lee @deadbarchetta.bsky.social · 09/12/2024
I've probably shared this with you before but just in case I haven't, one of my favorite Photoshop jobs I've ever done
The cover of John Coltrane's masterpiece album "A Love Supreme" but it's been edited to read "A Crunchwrap Supreme" and John appears to be smelling the titular Taco Bell menu item
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Tony Zador @tonyzador.bsky.social · 06/12/2024
Cosyne undergrad travel grants!
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Jake Sacks @jsacks.bsky.social · 06/12/2024
Tarkovsky is the best! Just rewatched Solaris recently and reading the book now. This is definitely a treasure trove
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jenny tightpants @jtp.bsky.social · 05/12/2024
rate my ride
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Jake Sacks @jsacks.bsky.social · 05/12/2024
Thanks for the support Ben
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Jake Sacks @jsacks.bsky.social · 05/12/2024
It's always "how neuron spike" and not "how neuron feel"
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Jake Sacks @jsacks.bsky.social · 04/12/2024
Definitely check them out, highly recommend! Adam Neely on another level
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Jake Sacks @jsacks.bsky.social · 04/12/2024
That's amazing! I wanna see him so badly. I am gonna see Sungazer next week, so that's a close second haha
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Jake Sacks @jsacks.bsky.social · 04/12/2024
Okay but the sonic soundtrack is a bop
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Jake Sacks @jsacks.bsky.social · 04/12/2024
2257 sounds like a Tigran subdivision of 4/4
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Jake Sacks @jsacks.bsky.social · 03/12/2024
"Approximate posterior" is a beautiful name for a girl
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Jake Sacks @jsacks.bsky.social · 03/12/2024
Drake: "coltrane changes can't be that bad, right?" Drake after looking at the chart:
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Elad Nehorai @eladn.bsky.social · 02/12/2024
New piece. A long deep dive piece into the reasons beyond the punditry and headlines as to why Harris and Democrats as a whole failed in 2024. I firmly believe this is about far more existential, psychological, and structural reasons than it has been depicted as. Here’s why.
open.substack.com
The Deeper Reasons Democrats Lost
It wasn't just that Trump got more votes. It wasn't just that Harris had lower turnout. A deep dive into the psychological, existential, and systemic reasons Harris and Democrats didn't win in 2024.
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Tim Behrens @behrenstimb.bsky.social · 01/12/2024
OK If we are moving to Bluesky I am rescuing my favourite ever twitter thread (Jan 2019). The renamed: Bluesky-sized history of neuroscience (biased by my interests)
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Jake Sacks @jsacks.bsky.social · 27/11/2024
Not exactly the same, but I remember seeing this paper awhile back that interpreted SGD from a control theoretic perspective, framing adaptive learning rates as feedback: proceedings.mlr.press/v70/li17f/li...
proceedings.mlr.press
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Jake Sacks @jsacks.bsky.social · 25/11/2024
Maybe not the best start of SOC in general, but some of Emo Todorov's work applies it to neuroscience! This is a great paper: homes.cs.washington.edu/~todorov/pap...
homes.cs.washington.edu
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Jake Sacks @jsacks.bsky.social · 23/11/2024
Me going anywhere in Texas outside Austin
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Jake Sacks @jsacks.bsky.social · 22/11/2024
Obligatory reunited with Travis photo
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Jake Sacks @jsacks.bsky.social · 22/11/2024
I'm seeing them in Seattle the day after! Sungazer is amazing
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Blake Richards @tyrellturing.bsky.social · 21/11/2024
1/ I work in #NeuroAI, a growing field of research, which many people have only the haziest conception of... As way of introduction to this research approach, I'll provide here a very short thread outlining the definition of the field I gave recently at our BRAIN NeuroAI workshop at the NIH. 🧠📈
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