Sign in

Gabe Gomes

@gabegomes.bsky.social
3K followers 647 following 24 posts

Research Scientist, X, The Moonshot Factory (fka Google X) | autonomous science designer | Assistant Professor (on leave), Carnegie Mellon University | h(e/im), views my own

PostsRepliesMedia
Reposted by Gabe Gomes
Nature Computational Science @natcomputsci.nature.com · 20/08/2026
📢In the latest Comment for our five-year anniversary series, @gabegomes.bsky.social and colleagues argue that what grounds trust in autonomous science is not a view inside the model — it's provenance. www.nature.com/articles/s43... #chemsky
nature.com
Provenance grounds trust in autonomous science - Nature Computational Science
As large language models begin to plan and run experiments on their own, the reflex is to demand that they be interpretable before they are trusted. We argue that what grounds trust in autonomous scie...
012
Reposted by Gabe Gomes
NSF Center for Computer Assisted Synthesis (C-CAS) @nsf-ccas.bsky.social · 29/10/2025
📰C-CAS in the News 📰 This article highlights the work of C-CAS PIs @olexandr.bsky.social and @gabegomes.bsky.social as well as trainees Robert MacKnight, Nick Gao, and Liliana Gallegos. www.cmu.edu/mcs/news-eve... #chemistry #computerscience #nsf #chemsky
cmu.edu
NSF Center for Computer Assisted Synthesis Creates Opportunities for Discovery
Carnegie Mellon chemistry professors, Olexandr Isayev and Gabriel Gomes, are making breakthroughs as part of the NSF Center for Computer Assisted Synthesis.
0123
Reposted by Gabe Gomes
NSF Center for Computer Assisted Synthesis (C-CAS) @nsf-ccas.bsky.social · 14/10/2025
Meet Jose Regio, a PhD student in the lab of @gabegomes.bsky.social at @cmuchemistry.bsky.social. Have a question for Jose? Let us know in the replies. #nsf #chemistry #ccas #meetascientist #computerscience #science #phd #stem #chemsky 1m
Photo of Jose smiling and holding two thumbs up. Text reads "Meet Jose Regio, PhD student at Carnegie Mellon University." CMU and C-CAS logos are also displayed. Photo of Jose presenting a research poster. Text reads "Jose’s research focuses on designing visual interfaces for researchers in chemistry. His aim is to improve the usability of scientific tools and to make data easier to explore. By removing the barrier of extensive programming experience, this work gives experimental chemists access to computational tools and insights from big datasets."Photo of Jose in front of a M. Pimatubo Crater Lake. Text reads "Jose was born in the Philippines and grew up in Connecticut. Outside of the lab, Jose is a volunteer at the Latino Community Center in Pittsburgh where he helps with math lessons and fostering teamwork for elementary schoolers. In his free time he likes to learn Tagalog, Spanish, and Mandarin."
032
Reposted by Gabe Gomes
CMU Mellon College of Science @cmuscience.bsky.social · 07/10/2025
CMU researchers are pushing the boundaries of AI in science. Gabe Gomes and his team developed Coscientist, an AI system that plans and executes chemical reactions — accelerating discoveries that once took years to complete. His work was featured in Nature. www.nature.com/articles/d41...
nature.com
Will AI ever win its own Nobel? Some predict a prize-worthy science discovery soon
Other researchers question whether autonomous AI scientists are possible or even desirable.
031
Reposted by Gabe Gomes
Narayan Lab @ UMich @narayanlab.bsky.social · 01/10/2025
CATNIP for the win! Read our newest work with the Gomes group- doi.org/10.1038/s415... @gabegomes.bsky.social @alisonnarayan.bsky.social @aepaton.bsky.social
021
Reposted by Gabe Gomes
Nature Computational Science @natcomputsci.nature.com · 24/09/2025
A Perspective from @gabegomes.bsky.social and colleagues covers the opportunities for LLMs to advance chemical research and the challenges that must be overcome to effectively use LLMs as scientific partners. #chemsky ➡️ nature.com/articles/s43... 🔓 rdcu.be/etcqs 🧵(8/13)
nature.com
Rethinking chemical research in the age of large language models - Nature Computational Science
This Perspective highlights the potential integrations of large language models (LLMs) in chemical research and provides guidance on the effective use of LLMs as research partners, noting the ethical and performance-based challenges that must be addressed moving forward.
153
Gabe Gomes @gabegomes.bsky.social · 18/09/2025
not a gotcha/rhetorical question: where/what sector do you think the most interesting science is being done today, broadly speaking? i’m trying to understand something.
200
Gabe Gomes @gabegomes.bsky.social · 06/09/2025
new preprint, tl;dr: • LLMs match or exceed SOTA strategies on chemical reaction optimizations. • we built the Iron Mind platform and we hope that it can serve as a new benchmark for both reaction optimizers and foundation models. a thread [1/5]
182
Reposted by Gabe Gomes
CMU Mellon College of Science @cmuscience.bsky.social · 22/07/2025
Gabe Gomes is rethinking how AI supports chemistry, taking the technology from providing passive answers to being an active lab partner that can help plan, test and accelerate discovery. www.cmu.edu/mcs/news-eve...
cmu.edu
Team Provides a Roadmap for Large Language Models in Chemical Research - Mellon College of Science - Carnegie Mellon University
In Nature Computational Science, Gomes and his coauthors offer a roadmap toward more strategic implementations of LLMs.
031
Reposted by Gabe Gomes
Nature Computational Science @natcomputsci.nature.com · 24/06/2025
A Perspective from @gabegomes.bsky.social and colleagues covers the opportunities for LLMs to advance chemical research and the challenges that must be overcome to effectively use LLMs as scientific partners. www.nature.com/articles/s43... 🔓https://rdcu.be/etcqs
nature.com
Rethinking chemical research in the age of large language models - Nature Computational Science
This Perspective highlights the potential integrations of large language models (LLMs) in chemical research and provides guidance on the effective use of LLMs as research partners, noting the ethical ...
183
Gabe Gomes @gabegomes.bsky.social · 19/06/2025
i made chatGPT (o3-pro + deep research) work for 63m on a task. i’ve never had it take any longer than 30 min on anything before this one. nice.
030
Reposted by Gabe Gomes
Chemistry @ Carnegie Mellon University @cmuchemistry.bsky.social · 17/06/2025
In Nature Machine Intelligence, Faculty member Gabe Gomes @gabegomes.bsky.social , PhD student Daniil Boiko, and their collaborators propose a new type of molecular ML representation that includes quantum-chemical interaction www.cmu.edu/mcs/news-eve...
cmu.edu
Enhancing Molecular Machine Learning with Quantum-Chemical Insight - Mellon College of Science - Carnegie Mellon University
In Nature Machine Intelligence, Gabe Gomes, Daniil Boiko and collaborators propose a new type of molecular ML representation.
041
Reposted by Gabe Gomes
Olexandr Isayev 🇺🇦 🇺🇸 @olexandr.bsky.social · 18/04/2025
It was a great pleasure to host @groupquintana.bsky.social for @cmuscience.bsky.social seminar! RamO(N) was talking about linear sling methods in molecular similarity and fast clustering! #chemsky #compchem Selfie with @gabegomes.bsky.social
3293
Gabe Gomes @gabegomes.bsky.social · 31/03/2025
stuff is all weird, but at least Deafheaven delivered a masterpiece with their latest album “Lonely People With Power”. definitely not everyone’s cup of tea (tw: heavy metal, harsh vocals), but it’s beautiful: youtu.be/XN7o7l5eehk?...
youtu.be
Deafheaven - Incidental II (feat. Jae Matthews) (Official Audio)
YouTube video by Deafheaven
140
Reposted by Gabe Gomes
Allie Paton @aepaton.bsky.social · 28/03/2025
Excited to share this article from @cenmag.bsky.social! Such a nice highlight of the work we've been doing between @narayanlab.bsky.social and @gabegomes.bsky.social cen.acs.org/acs-news/acs...
cen.acs.org
Chemists create matchmaking app for biocatalysis
Machine learning model Catnip helps chemists find biocatalysts to try in synthesis
0114
Reposted by Gabe Gomes
Bri Barbu @bribarbu.bsky.social · 28/03/2025
@narayanlab.bsky.social and @gabegomes.bsky.social designed Catnip--so named because it's "for the biocats"--to make it easier for newbs to use enzymatic reactions in organic synthesis. I had the privilege of hearing them talk about it at #ACSSpring2025 earlier this week! cen.acs.org/acs-news/acs...
cen.acs.org
Chemists create matchmaking app for biocatalysis
Machine learning model Catnip helps chemists find biocatalysts to try in synthesis
072
Reposted by Gabe Gomes
U-M Life Sciences Institute @umlifesciences.bsky.social · 28/03/2025
A team led by the @narayanlab.bsky.social and @gabegomes.bsky.social has developed an app to determine which biocatalysts are likely to work for a given molecule, making it easier for chemists to incorporate biocatalysts into organic synthesis. @alisonnarayan.bsky.social cen.acs.org/acs-news/acs...
cen.acs.org
Chemists create matchmaking app for biocatalysis
Machine learning model Catnip helps chemists find biocatalysts to try in synthesis
082
Reposted by Gabe Gomes
NSF Center for Computer Assisted Synthesis (C-CAS) @nsf-ccas.bsky.social · 25/03/2025
Don't miss @gabegomes.bsky.social at ACS today at 4:30 PM PT! More info about his talk here: acs.digitellinc.com/live/34/sess... #chemsky #NSF #CCAS #chemistry #ACS
041
Reposted by Gabe Gomes
The Gomes Group at Carnegie Mellon University @gpggrp.bsky.social · 25/03/2025
day 2 at the ACS Spring 2025: Daniil talks CATNIP (3:20 PM, Hall F Room 1). Robert (COMP Poster Session, 7 PM) will cover 'the Iron Mind project' and @gabegomes.bsky.social (4:30 PM, Room 25A) will give a glimpse of our efforts towards autonomous catalyst optimization with LLMs.
032
Reposted by Gabe Gomes
Alán Aspuru-Guzik @aspuru.bsky.social · 25/03/2025
Check out our work on corrected product formulas (CPF) to lower the cost of #hamiltonian #simulation #quantumalgorithms @uoftcompsci.bsky.social @cqiqc-uoft.bsky.social @vectorinstitute.ai @chemuoft.bsky.social
0113
Gabe Gomes @gabegomes.bsky.social · 24/03/2025
the @gpggrp.bsky.social is at the ACS Spring 2025! come check out the works of Daniil Boiko and Rob MacKnight at the "ML + AI in Organic Chemistry" Symposium (Hall B-1, Room 4) today! extreme scaling of experimental chemical reactions via MS and an OS for autonomous comp chem!
042
Gabe Gomes @gabegomes.bsky.social · 23/03/2025
hello San Diego!
040
Reposted by Gabe Gomes
Ben Blaiszik @benblaiszik.bsky.social · 18/03/2025
People are rushing to apply AI to discover materials for applications in health, energy, aerospace and more. Are we the cool kids now? - Lila => $200M - OpenAI VP => AI+materials company - Cusp => $30M - RadicalAI automating materials discovery - FutureHouse scientific agents
294
Reposted by Gabe Gomes
Olexandr Isayev 🇺🇦 🇺🇸 @olexandr.bsky.social · 18/03/2025
Despite being trained primarily on monophosphine ligands in Pd(0)/Pd(II) cycles, it demonstrates good transferability to diverse palladium complexes, including bidentate phosphines and dinuclear Pd(I) complexes. The speed of AIMNet2-Pd makes computational high-throughput catalyst screening feasible
041
Reposted by Gabe Gomes
Olexandr Isayev 🇺🇦 🇺🇸 @olexandr.bsky.social · 18/03/2025
The model can characterize entire catalytic cycles including geometry optimization, transition state searches, and energy calculations for each step of a catalytic process (oxidative addition, transmetalation, and reductive elimination etc).
031
Reposted by Gabe Gomes
Olexandr Isayev 🇺🇦 🇺🇸 @olexandr.bsky.social · 18/03/2025
AIMNet2-Pd enables rapid computational studies of Pd-catalyzed cross-coupling reactions by replacing computationally expensive QM calculations with a neural network while maintaining high accuracy (within 1-2 kcal mol⁻¹ and ~0.1 Å compared to reference quantum mechanics calculations).
051
Gabe Gomes @gabegomes.bsky.social · 18/03/2025
such a joy to collaborate with so many amazing colleagues under @nsf-ccas.bsky.social! ultrafast and accurate NNPs with Pd to tackle some of the most relevant transformations in all of the chemical enterprise! @cmuscience.bsky.social @cmuengineering.bsky.social @gpggrp.bsky.social
0101
Reposted by Gabe Gomes
Andrew White 🐦‍⬛ @andrew.diffuse.one · 19/02/2025
Image duplication has been a powerful signal for detecting scientific fraud, but is irrelevant in many fields. I've been working a bit on finding new signals like it that work across fields. I've found one using LLMs that can predict retractions, weakly, for $1 per paper. 1/4
263
Reposted by Gabe Gomes
Felippe Colombari @colombarifm.bsky.social · 12/02/2025
From biodiversity research to industrial application: our new work unlocks the potential of Brazilian natural resources, providing opportunities to convert agro-industrial residues into valuable bioproducts. #chembio #cnpem
062
Reposted by Gabe Gomes
Alán Aspuru-Guzik @aspuru.bsky.social · 07/02/2025
Happy to appear in #BNNBloomberg TV talking about our recent research paper in @naturebiotech.bsky.social about #ai and #quantum for KRAS binder discovery. With @akshatai.bsky.social @elonverse.bsky.social Igor Staglar @cgorgulla.bsky.social @ghazivakili.bsky.social and others #chemsky
0197
Gabe Gomes @gabegomes.bsky.social · 06/02/2025
lil thread replying to @dereklowe.bsky.social's latest post on OpenAI's Deep research.
030
Gabe Gomes @gabegomes.bsky.social · 05/02/2025
Deep Research from OpenAI is really that good. i was thoroughly impressed by o3-mini (even more so than o1 pro mode), but Deep Research is something else. getting really exciting ideas for new reactions and catalysts. no need for hype.
140
Reposted by Gabe Gomes
Chemistry @ Carnegie Mellon University @cmuchemistry.bsky.social · 29/01/2025
Chemistry Seminar Kaitlin McCardle Nature Computational Science Nature Computational Science: A dedicated home for computational science Host: Gabriel Gomes @gabegomes.bsky.social Friday, January 31st, 2025 12:30 p.m. Mellon Institute Conference Room 348
042
Reposted by Gabe Gomes
Alán Aspuru-Guzik @aspuru.bsky.social · 21/01/2025
Excited to have #selfdrivinglaboratories listed as one of the seven technologies to watch in 2025 by @nature.com Thanks to the #matterlab, the @accelerationc.bsky.social and of course all the global community on SDLs! @uoft.bsky.social @vectorinst.bsky.social l www.nature.com/articles/d41...
nature.com
Self-driving laboratories, advanced immunotherapies and five more technologies to watch in 2025
Sustainability and artificial intelligence dominate our seventh annual round-up of exciting innovations.
04316
Reposted by Gabe Gomes
Evan Spotte-Smith (they/them) @ewcss.info · 26/12/2024
Preprint! "Inverse Design of Complex Nanoparticle Heterostructures via Deep Learning on Heterogeneous Graphs" is now on ChemRxiv. In this work, we consider the problem of applying deep learning to heterogeneous nanostructures. (1/10) #ChemSky 🧪 #CompChem #physics #optics #nanoscience
doi.org
Inverse Design of Complex Nanoparticle Heterostructures via Deep Learning on Heterogeneous Graphs
Applications of deep learning (DL) to design nanomaterials are hampered by a lack of suitable data representations and training data. We report efforts to overcome these limitations and leverage DL to...
1192
Reposted by Gabe Gomes
Evan Spotte-Smith (they/them) @ewcss.info · 08/01/2025
@samblau.bsky.social, Brett Savoie (Notre Dame), and I are organizing a symposium for @amerchemsociety.bsky.social Fall 2025 called "Chemical Reaction Networks, Retrosynthesis, and Reaction Prediction" under @acscomp.bsky.social. #reactionnetwork #CRN #retrosynthesis 🧪 ⚗️ #CompChem
11610
Reposted by Gabe Gomes
Matthieu Sollogoub @msollogoub.bsky.social · 06/01/2025
Here is a tentative Supramolecular Chemistry starter kit. Please let me know if you wish to be added ! #ChemSky go.bsky.app/RjRgi6n
3710951
Gabe Gomes @gabegomes.bsky.social · 02/01/2025
now, this is a thread that brings joy! incredibly useful tips here, thanks Emma!
061
Reposted by Gabe Gomes
C&EN (Chemical & Engineering News) @cenmag.bsky.social · 29/12/2024
C&EN’s Year in Chemistry: Here are some of the coolest, most fascinating, and thought-provoking findings of the year. cen.acs.org/magazine/102... #chemsky🧪 #scinews
Year in Chemistry
03014
Reposted by Gabe Gomes
Ian Dunn @ian-dunn.bsky.social · 11/12/2024
I'm presenting a new paper "Exploring Discrete Flow Matching for 3D De Novo Molecule Generation" at @workshopmlsb.bsky.social this week! More info in this thread but reach out if want to chat at NeurIPS about generative models or molecular design. arxiv.org/abs/2411.16644
25111
Reposted by Gabe Gomes
The Gomes Group at Carnegie Mellon University @gpggrp.bsky.social · 24/11/2024
hello world
1163
Reposted by Gabe Gomes
André K. Isaacs @drdre4000.bsky.social · 24/11/2024
Synthetic chemists! If you haven’t discovered chemdle yet, you are missing out big time! Synthesis meets wordle! www.chemdle.com
chemdle.com
Chemdle
Curated daily chemistry problems. Six attempts to solve the questions, on topics from named reactions to total synthesis.
18823
Reposted by Gabe Gomes
Ben Blaiszik @benblaiszik.bsky.social · 15/11/2024
Follow leading researchers, practitioners, and thought leaders exploring the intersection of #AI, machine learning, data science, and scientific research. 🦋 ➕We are just getting started, please send me others who should be added go.bsky.app/JeFdryY #ML
4310441
Reposted by Gabe Gomes
Chemistry @ Carnegie Mellon University @cmuchemistry.bsky.social · 22/12/2023
With their AI copilot for science, Gabe Gomes @gabegomes.bsky.social and his group members, Daniil Boiko, and Robert MacKnight are opening the "black box" of experimentation. www.cmu.edu/mcs/news-eve...
cmu.edu
CMU-Designed Artificially Intelligent Coscientist Automates Scientific Discovery - Mellon College of...
A non-organic intelligent system has for the first time designed, planned and executed a chemistry experiment, CMU researchers report.
042